RNA–Protein interactions for RNA: YCR017C

CWH43, Transcript of Putative sensor/transporter protein involved in cell wall biogenesis, yeastyeast

Gene CWH43, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CWH43YCR017C LAM6Q08001 693 aa5.3□□□□□ -1.56
CWH43YCR017C LYS2P07702 1392 aa5.3□□□□□ -1.56
CWH43YCR017C AUS1Q08409 1394 aa5.29□□□□□ -1.56
CWH43YCR017C YRF1-4O13559 1382 aa5.29□□□□□ -1.56
CWH43YCR017C LEU3P08638 886 aa5.29□□□□□ -1.56
CWH43YCR017C ENP1P38333 483 aaKnown RBP5.29□□□□□ -1.56
CWH43YCR017C ALD2P47771 506 aa5.29□□□□□ -1.56
CWH43YCR017C XKS1P42826 600 aa5.28□□□□□ -1.56
CWH43YCR017C FOX2Q02207 900 aaKnown RBP5.28□□□□□ -1.56
CWH43YCR017C UGA2P38067 497 aa5.28□□□□□ -1.56
CWH43YCR017C POL5P39985 1022 aaKnown RBP5.28□□□□□ -1.56
CWH43YCR017C DOT5P40553 215 aa5.27□□□□□ -1.57
CWH43YCR017C RPS9BP05755 195 aaKnown RBP5.26□□□□□ -1.57
CWH43YCR017C YJL181WP46987 611 aa5.26□□□□□ -1.57
CWH43YCR017C MDG1P53885 366 aa5.26□□□□□ -1.57
CWH43YCR017C RPS24AP0CX31 135 aaKnown RBP5.26□□□□□ -1.57
CWH43YCR017C RPS24BP0CX32 135 aaKnown RBP5.26□□□□□ -1.57
CWH43YCR017C YKL133CP36066 463 aa5.26□□□□□ -1.57
CWH43YCR017C DMA1P38823 416 aa5.26□□□□□ -1.57
CWH43YCR017C RAD4P14736 754 aa5.25□□□□□ -1.57
CWH43YCR017C GRX1P25373 110 aaKnown RBP5.25□□□□□ -1.57
CWH43YCR017C YKR075CP36155 307 aa5.25□□□□□ -1.57
CWH43YCR017C UTP22P53254 1237 aaPredicted RBP5.24□□□□□ -1.57
CWH43YCR017C ALD3P54114 506 aa5.24□□□□□ -1.57
CWH43YCR017C SSA2P10592 639 aaKnown RBP5.23□□□□□ -1.57
CWH43YCR017C YBL086CP38177 466 aa5.23□□□□□ -1.57
CWH43YCR017C NPR2P39923 615 aa5.23□□□□□ -1.57
CWH43YCR017C PSD2P53037 1138 aaKnown RBP5.23□□□□□ -1.57
CWH43YCR017C RPN11P43588 306 aaKnown RBP5.22□□□□□ -1.57
CWH43YCR017C DPS1P04802 557 aaKnown RBP5.22□□□□□ -1.57
CWH43YCR017C PDS5Q04264 1277 aa5.22□□□□□ -1.57
CWH43YCR017C MGA2P40578 1113 aa5.21□□□□□ -1.58
CWH43YCR017C BUG1Q12191 341 aa5.21□□□□□ -1.58
CWH43YCR017C MSB4Q12317 492 aa5.21□□□□□ -1.58
CWH43YCR017C RCR1P38212 213 aa5.2□□□□□ -1.58
CWH43YCR017C COBP00163 385 aa5.19□□□□□ -1.58
CWH43YCR017C KAR2P16474 682 aaKnown RBP5.19□□□□□ -1.58
CWH43YCR017C SSK22P25390 1331 aaPredicted RBP5.19□□□□□ -1.58
CWH43YCR017C NUP145P49687 1317 aa5.19□□□□□ -1.58
CWH43YCR017C INP54Q08227 384 aaKnown RBP5.19□□□□□ -1.58
CWH43YCR017C RTG3P38165 486 aa5.18□□□□□ -1.58
CWH43YCR017C ATG13Q06628 738 aa5.18□□□□□ -1.58
CWH43YCR017C CTH1P47976 325 aa5.18□□□□□ -1.58
CWH43YCR017C SSA1P10591 642 aaKnown RBP5.17□□□□□ -1.58
CWH43YCR017C UGA3P26370 528 aa5.17□□□□□ -1.58
CWH43YCR017C DSD1P53095 428 aa5.17□□□□□ -1.58
CWH43YCR017C ADE16P54113 591 aaKnown RBP5.17□□□□□ -1.58
CWH43YCR017C DIB1Q06819 143 aaPredicted RBP5.17□□□□□ -1.58
CWH43YCR017C NSR1P27476 414 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
CWH43YCR017C AOS1Q06624 347 aa5.16□□□□□ -1.58
CWH43YCR017C MRM1P25270 412 aa5.16□□□□□ -1.58
CWH43YCR017C KCC4P25389 1037 aa5.15□□□□□ -1.58
CWH43YCR017C TOS1P38288 455 aa5.15□□□□□ -1.58
CWH43YCR017C NST1P53935 1240 aa5.15□□□□□ -1.58
CWH43YCR017C UBP9P39967 754 aa5.15□□□□□ -1.59
CWH43YCR017C YOR238WQ08634 303 aa5.15□□□□□ -1.59
CWH43YCR017C RPP0P05317 312 aaKnown RBP5.14□□□□□ -1.59
CWH43YCR017C OSM1P21375 501 aaKnown RBP5.14□□□□□ -1.59
CWH43YCR017C MAM1P40065 302 aa5.14□□□□□ -1.59
CWH43YCR017C YAP5P40574 245 aa5.14□□□□□ -1.59
CWH43YCR017C SAP155P43612 1002 aa5.14□□□□□ -1.59
CWH43YCR017C PHM7Q12252 991 aa5.14□□□□□ -1.59
CWH43YCR017C FRK1Q03002 865 aaPredicted RBP5.14□□□□□ -1.59
CWH43YCR017C RMT2Q03305 412 aa5.14□□□□□ -1.59
CWH43YCR017C GRE2Q12068 342 aaKnown RBP5.14□□□□□ -1.59
CWH43YCR017C LEO1P38439 464 aa5.14□□□□□ -1.59
CWH43YCR017C RRT14P40470 206 aa5.14□□□□□ -1.59
CWH43YCR017C CST9Q06032 482 aa5.14□□□□□ -1.59
CWH43YCR017C GAS4Q08271 471 aa5.14□□□□□ -1.59
CWH43YCR017C AKL1P38080 1108 aaKnown RBP5.13□□□□□ -1.59
CWH43YCR017C YNL050CP53952 270 aa5.13□□□□□ -1.59
CWH43YCR017C SSP2Q08646 371 aa5.13□□□□□ -1.59
CWH43YCR017C YBP2P53169 641 aa5.12□□□□□ -1.59
CWH43YCR017C FIG2P25653 1609 aa5.12□□□□□ -1.59
CWH43YCR017C HKR1P41809 1802 aa5.12□□□□□ -1.59
CWH43YCR017C CTT1P06115 562 aa5.12□□□□□ -1.59
CWH43YCR017C LYS4P49367 693 aaPredicted RBP5.12□□□□□ -1.59
CWH43YCR017C NSE3Q05541 303 aa5.12□□□□□ -1.59
CWH43YCR017C HIM1Q06674 414 aa5.12□□□□□ -1.59
CWH43YCR017C YKL222CP35995 705 aa5.11□□□□□ -1.59
CWH43YCR017C NTH2P35172 780 aa5.11□□□□□ -1.59
CWH43YCR017C ERT1P38140 529 aa5.11□□□□□ -1.59
CWH43YCR017C RAT1Q02792 1006 aaKnown RBP5.1□□□□□ -1.59
CWH43YCR017C PFF1P38244 976 aa5.1□□□□□ -1.59
CWH43YCR017C NOP53Q12080 455 aaKnown RBP5.09□□□□□ -1.59
CWH43YCR017C MST1P07236 462 aa5.09□□□□□ -1.6
CWH43YCR017C YJR008WP47085 338 aa5.08□□□□□ -1.6
CWH43YCR017C NYV1Q12255 253 aa5.08□□□□□ -1.6
CWH43YCR017C HSP104P31539 908 aaKnown RBP5.07□□□□□ -1.6
CWH43YCR017C UBX2Q04228 584 aa5.07□□□□□ -1.6
CWH43YCR017C YRB30P53107 440 aaPredicted RBP5.07□□□□□ -1.6
CWH43YCR017C ERO1Q03103 563 aa5.07□□□□□ -1.6
CWH43YCR017C GRX6Q12438 231 aa5.06□□□□□ -1.6
CWH43YCR017C YER156CP40093 338 aaKnown RBP5.06□□□□□ -1.6
CWH43YCR017C PAP2P53632 584 aaKnown RBP5.06□□□□□ -1.6
CWH43YCR017C ORC1P54784 914 aaPredicted RBP5.06□□□□□ -1.6
CWH43YCR017C SAC3P46674 1301 aa5.05□□□□□ -1.6
CWH43YCR017C TRK1P12685 1235 aa5.05□□□□□ -1.6
CWH43YCR017C HGH1P48362 394 aaKnown RBP5.05□□□□□ -1.6
CWH43YCR017C MSN5P52918 1224 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms