RNA–Protein interactions for RNA: YCL069W

VBA3, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA3YCL069W FKS3Q04952 1785 aa10.84□□□□□ -0.67
VBA3YCL069W KAR2P16474 682 aaKnown RBP10.84□□□□□ -0.67
VBA3YCL069W GLN1P32288 370 aaKnown RBP10.84□□□□□ -0.67
VBA3YCL069W XKS1P42826 600 aa10.83□□□□□ -0.68
VBA3YCL069W RSF2P46974 1380 aa10.83□□□□□ -0.68
VBA3YCL069W APC1P53886 1748 aa10.8□□□□□ -0.68
VBA3YCL069W ENP1P38333 483 aaKnown RBP10.79□□□□□ -0.68
VBA3YCL069W PAP2P53632 584 aaKnown RBP10.79□□□□□ -0.68
VBA3YCL069W BUB1P41695 1021 aaKnown RBP RIP-Chip data10.77□□□□□ -0.68not detected
VBA3YCL069W RCR1P38212 213 aa10.77□□□□□ -0.69
VBA3YCL069W DOT5P40553 215 aa10.77□□□□□ -0.69
VBA3YCL069W YMR074CQ04773 145 aa10.77□□□□□ -0.69
VBA3YCL069W MRM1P25270 412 aa10.76□□□□□ -0.69
VBA3YCL069W SIS1P25294 352 aaKnown RBP10.76□□□□□ -0.69
VBA3YCL069W YKL133CP36066 463 aa10.75□□□□□ -0.69
VBA3YCL069W RPO41P13433 1351 aaKnown RBP10.74□□□□□ -0.69
VBA3YCL069W MGA2P40578 1113 aa10.74□□□□□ -0.69
VBA3YCL069W RRP46P53256 223 aaPredicted RBP10.73□□□□□ -0.69
VBA3YCL069W FOX2Q02207 900 aaKnown RBP10.73□□□□□ -0.69
VBA3YCL069W ROM2P51862 1356 aaKnown RBP10.71□□□□□ -0.69
VBA3YCL069W RPN11P43588 306 aaKnown RBP10.71□□□□□ -0.69
VBA3YCL069W YBL029C-AQ3E756 94 aa10.71□□□□□ -0.69
VBA3YCL069W DSD1P53095 428 aa10.7□□□□□ -0.7
VBA3YCL069W COBP00163 385 aa10.69□□□□□ -0.7
VBA3YCL069W SIR4P11978 1358 aa10.69□□□□□ -0.7
VBA3YCL069W HSP104P31539 908 aaKnown RBP10.68□□□□□ -0.7
VBA3YCL069W AKL1P38080 1108 aaKnown RBP10.68□□□□□ -0.7
VBA3YCL069W ADE16P54113 591 aaKnown RBP10.68□□□□□ -0.7
VBA3YCL069W CST9Q06032 482 aa10.68□□□□□ -0.7
VBA3YCL069W MEC3Q02574 474 aa10.67□□□□□ -0.7
VBA3YCL069W FRK1Q03002 865 aaPredicted RBP10.67□□□□□ -0.7
VBA3YCL069W YRF1-4O13559 1382 aa10.67□□□□□ -0.7
VBA3YCL069W SNF2P22082 1703 aa10.66□□□□□ -0.7
VBA3YCL069W RTR1P40084 226 aaPredicted RBP10.65□□□□□ -0.7
VBA3YCL069W INP54Q08227 384 aaKnown RBP10.65□□□□□ -0.71
VBA3YCL069W YKR075CP36155 307 aa10.64□□□□□ -0.71
VBA3YCL069W LAM6Q08001 693 aa10.64□□□□□ -0.71
VBA3YCL069W OSM1P21375 501 aaKnown RBP10.62□□□□□ -0.71
VBA3YCL069W NPR2P39923 615 aa10.62□□□□□ -0.71
VBA3YCL069W VNX1P42839 908 aa10.62□□□□□ -0.71
VBA3YCL069W YJL181WP46987 611 aa10.62□□□□□ -0.71
VBA3YCL069W MPP10P47083 593 aaKnown RBP10.62□□□□□ -0.71
VBA3YCL069W IOC4Q04213 475 aa10.62□□□□□ -0.71
VBA3YCL069W ATG13Q06628 738 aa10.62□□□□□ -0.71
VBA3YCL069W PRD1P25375 712 aa10.61□□□□□ -0.71
VBA3YCL069W NTH2P35172 780 aa10.61□□□□□ -0.71
VBA3YCL069W GTT3P39996 337 aa10.61□□□□□ -0.71
VBA3YCL069W YDL144CQ07589 356 aa10.61□□□□□ -0.71
VBA3YCL069W UBP1P25037 809 aa10.6□□□□□ -0.71
VBA3YCL069W CTF4Q01454 927 aa10.6□□□□□ -0.71
VBA3YCL069W NUP145P49687 1317 aa10.59□□□□□ -0.71
VBA3YCL069W PRP40P33203 583 aaKnown RBP10.59□□□□□ -0.71
VBA3YCL069W AOS1Q06624 347 aa10.59□□□□□ -0.71
VBA3YCL069W LYS4P49367 693 aaPredicted RBP10.58□□□□□ -0.72
VBA3YCL069W THI22Q06490 572 aa10.58□□□□□ -0.72
VBA3YCL069W WSC3Q12215 556 aa10.58□□□□□ -0.72
VBA3YCL069W RIM15P43565 1770 aa10.58□□□□□ -0.72
VBA3YCL069W PIB1Q06651 286 aa10.56□□□□□ -0.72
VBA3YCL069W YBP2P53169 641 aa10.54□□□□□ -0.72
VBA3YCL069W YNL050CP53952 270 aa10.54□□□□□ -0.72
VBA3YCL069W SPP1Q03012 353 aa10.54□□□□□ -0.72
VBA3YCL069W SAP155P43612 1002 aa10.53□□□□□ -0.72
VBA3YCL069W RTT109Q07794 436 aa10.53□□□□□ -0.72
VBA3YCL069W KCC4P25389 1037 aa10.52□□□□□ -0.72
VBA3YCL069W TPD3P31383 635 aa10.52□□□□□ -0.72
VBA3YCL069W YMR1P47147 688 aaKnown RBP RIP-Chip data10.52□□□□□ -0.72not detected
VBA3YCL069W TUM1Q08686 304 aaKnown RBP10.52□□□□□ -0.73
VBA3YCL069W EDE1P34216 1381 aa10.51□□□□□ -0.73
VBA3YCL069W VPS29P38759 282 aa10.51□□□□□ -0.73
VBA3YCL069W ZDS1P50111 915 aaKnown RBP10.51□□□□□ -0.73
VBA3YCL069W ALE1Q08548 619 aa10.51□□□□□ -0.73
VBA3YCL069W RPP0P05317 312 aaKnown RBP10.5□□□□□ -0.73
VBA3YCL069W SUI2P20459 304 aaKnown RBP10.5□□□□□ -0.73
VBA3YCL069W GRX1P25373 110 aaKnown RBP10.5□□□□□ -0.73
VBA3YCL069W YBL086CP38177 466 aa10.5□□□□□ -0.73
VBA3YCL069W RRT14P40470 206 aa10.5□□□□□ -0.73
VBA3YCL069W MSB4Q12317 492 aa10.5□□□□□ -0.73
VBA3YCL069W YBR287WP38355 427 aa10.49□□□□□ -0.73
VBA3YCL069W HEF3P53978 1044 aaKnown RBP10.49□□□□□ -0.73
VBA3YCL069W PRS1P32895 427 aaKnown RBP10.48□□□□□ -0.73
VBA3YCL069W VPS27P40343 622 aaKnown RBP10.48□□□□□ -0.73
VBA3YCL069W CTH1P47976 325 aa10.48□□□□□ -0.73
VBA3YCL069W UGA3P26370 528 aa10.47□□□□□ -0.73
VBA3YCL069W NSE3Q05541 303 aa10.47□□□□□ -0.73
VBA3YCL069W GRE2Q12068 342 aaKnown RBP10.47□□□□□ -0.73
VBA3YCL069W MAM1P40065 302 aa10.46□□□□□ -0.74
VBA3YCL069W GYP7P48365 746 aa10.46□□□□□ -0.74
VBA3YCL069W RMT2Q03305 412 aa10.46□□□□□ -0.74
VBA3YCL069W BMS1Q08965 1183 aaKnown RBP10.46□□□□□ -0.74
VBA3YCL069W COQ4O13525 335 aa10.45□□□□□ -0.74
VBA3YCL069W DBP1P24784 617 aaKnown RBP10.45□□□□□ -0.74
VBA3YCL069W TIF11P38912 153 aaKnown RBP10.45□□□□□ -0.74
VBA3YCL069W ALD2P47771 506 aa10.45□□□□□ -0.74
VBA3YCL069W CDC45Q08032 650 aa10.45□□□□□ -0.74
VBA3YCL069W RVB2Q12464 471 aaKnown RBP10.45□□□□□ -0.74
VBA3YCL069W SSA2P10592 639 aaKnown RBP10.43□□□□□ -0.74
VBA3YCL069W RAD4P14736 754 aa10.43□□□□□ -0.74
VBA3YCL069W UGA2P38067 497 aa10.43□□□□□ -0.74
VBA3YCL069W NOP53Q12080 455 aaKnown RBP10.43□□□□□ -0.74
VBA3YCL069W BUD27P43573 796 aaKnown RBP RIP-Chip data10.41□□□□□ -0.74not detected
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms