RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeastyeast

Gene SLX1, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX1YBR228W ENV9Q08651 330 aa9.27□□□□□ -0.93
SLX1YBR228W FIG4P42837 879 aa9.25□□□□□ -0.93
SLX1YBR228W PTK2P47116 818 aaKnown RBP9.24□□□□□ -0.93
SLX1YBR228W TEC1P18412 486 aa9.23□□□□□ -0.93
SLX1YBR228W MAK16P10962 306 aaPredicted RBP9.22□□□□□ -0.93
SLX1YBR228W RGA1P39083 1007 aa9.21□□□□□ -0.94
SLX1YBR228W LCB5Q06147 687 aaKnown RBP9.21□□□□□ -0.94
SLX1YBR228W BRL1P38770 471 aa9.2□□□□□ -0.94
SLX1YBR228W HPC2Q01448 625 aa9.18□□□□□ -0.94
SLX1YBR228W YPL062WQ02781 134 aa9.18□□□□□ -0.94
SLX1YBR228W EMW1P42842 904 aaKnown RBP9.17□□□□□ -0.94
SLX1YBR228W TFB3Q03290 321 aa9.17□□□□□ -0.94
SLX1YBR228W YBL086CP38177 466 aa9.16□□□□□ -0.94
SLX1YBR228W YBL036CP38197 257 aa9.16□□□□□ -0.94
SLX1YBR228W RTT106P40161 455 aa9.16□□□□□ -0.94
SLX1YBR228W GUT2P32191 649 aa9.13□□□□□ -0.95
SLX1YBR228W MKS1P34072 584 aa9.13□□□□□ -0.95
SLX1YBR228W YLR346CQ06139 101 aa9.13□□□□□ -0.95
SLX1YBR228W ARG82P07250 355 aa9.12□□□□□ -0.95
SLX1YBR228W NAF1P53919 492 aaKnown RBP9.12□□□□□ -0.95
SLX1YBR228W OPT2Q06593 877 aa9.12□□□□□ -0.95
SLX1YBR228W YPR084WQ06821 456 aa9.12□□□□□ -0.95
SLX1YBR228W CSE4P36012 229 aa9.11□□□□□ -0.95
SLX1YBR228W NUP85P46673 744 aa9.11□□□□□ -0.95
SLX1YBR228W PKC1P24583 1151 aa9.1□□□□□ -0.95
SLX1YBR228W AAD14P42884 376 aa9.1□□□□□ -0.95
SLX1YBR228W DFG5Q05031 458 aa9.1□□□□□ -0.95
SLX1YBR228W STE20Q03497 939 aaKnown RBP9.09□□□□□ -0.95
SLX1YBR228W DLD1P32891 587 aa9.07□□□□□ -0.96
SLX1YBR228W MIP1P15801 1254 aa9.06□□□□□ -0.96
SLX1YBR228W ISF1P32488 338 aa9.06□□□□□ -0.96
SLX1YBR228W LSC2P53312 427 aa9.06□□□□□ -0.96
SLX1YBR228W YDJ1P25491 409 aaKnown RBP9.05□□□□□ -0.96
SLX1YBR228W CAF120P53836 1060 aa9.05□□□□□ -0.96
SLX1YBR228W BDS1Q08347 646 aa9.05□□□□□ -0.96
SLX1YBR228W SPT5P27692 1063 aaKnown RBP9.04□□□□□ -0.96
SLX1YBR228W FBP26P32604 452 aa9.04□□□□□ -0.96
SLX1YBR228W EMP47P43555 445 aa9.04□□□□□ -0.96
SLX1YBR228W ATG20Q07528 640 aa9.04□□□□□ -0.96
SLX1YBR228W FRA1Q07825 749 aa9.04□□□□□ -0.96
SLX1YBR228W MCM16Q12262 181 aa9.04□□□□□ -0.96
SLX1YBR228W SCW11P53189 542 aa9.03□□□□□ -0.96
SLX1YBR228W YDL176WQ12027 708 aa9.03□□□□□ -0.96
SLX1YBR228W BIO2P32451 375 aa9.01□□□□□ -0.97
SLX1YBR228W GLY1P37303 387 aaKnown RBP9.01□□□□□ -0.97
SLX1YBR228W YJR098CP47139 656 aa9□□□□□ -0.97
SLX1YBR228W TCB1Q12466 1186 aa8.99□□□□□ -0.97
SLX1YBR228W YNL108CP53929 270 aa8.98□□□□□ -0.97
SLX1YBR228W UBP2Q01476 1272 aa8.98□□□□□ -0.97
SLX1YBR228W ISU1Q03020 165 aa8.97□□□□□ -0.97
SLX1YBR228W TY1A-BLQ12266 440 aa8.97□□□□□ -0.97
SLX1YBR228W STE6P12866 1290 aa8.96□□□□□ -0.98
SLX1YBR228W YJL007CP47080 104 aa8.96□□□□□ -0.98
SLX1YBR228W ISR1Q06098 443 aaKnown RBP8.96□□□□□ -0.98
SLX1YBR228W ACO2P39533 789 aa8.95□□□□□ -0.98
SLX1YBR228W MRX12P47084 519 aa8.95□□□□□ -0.98
SLX1YBR228W HGH1P48362 394 aaKnown RBP8.94□□□□□ -0.98
SLX1YBR228W DLD3P39976 496 aaKnown RBP8.93□□□□□ -0.98
SLX1YBR228W YIR007WP40566 764 aa8.93□□□□□ -0.98
SLX1YBR228W RGA2Q06407 1009 aa8.92□□□□□ -0.98
SLX1YBR228W ENO2P00925 437 aaKnown RBP8.91□□□□□ -0.98
SLX1YBR228W RPP2BP02400 110 aaKnown RBP8.91□□□□□ -0.98
SLX1YBR228W YPP1P46951 817 aa8.91□□□□□ -0.98
SLX1YBR228W LEO1P38439 464 aa8.89□□□□□ -0.99
SLX1YBR228W SUP45P12385 437 aaKnown RBP8.88□□□□□ -0.99
SLX1YBR228W DAT1P13483 248 aaKnown RBP8.88□□□□□ -0.99
SLX1YBR228W SOH1P38633 127 aa8.88□□□□□ -0.99
SLX1YBR228W ATG3P40344 310 aa8.88□□□□□ -0.99
SLX1YBR228W APL6P46682 809 aa8.88□□□□□ -0.99
SLX1YBR228W UTR2P32623 467 aa8.87□□□□□ -0.99
SLX1YBR228W OSH7P38755 437 aa8.86□□□□□ -0.99
SLX1YBR228W HAL5P38970 855 aaKnown RBP8.85□□□□□ -0.99
SLX1YBR228W WTM2Q12206 467 aa8.85□□□□□ -0.99
SLX1YBR228W BIM1P40013 344 aa8.84□□□□□ -0.99
SLX1YBR228W RPL34BP40525 121 aaKnown RBP8.84□□□□□ -0.99
SLX1YBR228W ROG3P43602 733 aa8.84□□□□□ -0.99
SLX1YBR228W TBS1P38114 1094 aa8.83□□□□□ -1
SLX1YBR228W ATG32P40458 529 aa8.83□□□□□ -1
SLX1YBR228W RIM21P48565 533 aa8.83□□□□□ -1
SLX1YBR228W YGR035CP53222 116 aa8.83□□□□□ -1
SLX1YBR228W SPT2P06843 333 aaPredicted RBP8.8□□□□□ -1
SLX1YBR228W TY1A-MR1Q04215 440 aa8.8□□□□□ -1
SLX1YBR228W UTP13Q05946 817 aaKnown RBP8.8□□□□□ -1
SLX1YBR228W TIF1P10081 395 aaKnown RBP8.79□□□□□ -1
SLX1YBR228W UTP7P40055 554 aaKnown RBP8.79□□□□□ -1
SLX1YBR228W HPF1Q05164 967 aa8.79□□□□□ -1
SLX1YBR228W RTG2P32608 588 aaKnown RBP8.78□□□□□ -1
SLX1YBR228W CDC19P00549 500 aaKnown RBP8.77□□□□□ -1.01
SLX1YBR228W VTC4P47075 721 aa8.77□□□□□ -1.01
SLX1YBR228W HDA3Q06623 655 aa8.77□□□□□ -1.01
SLX1YBR228W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
SLX1YBR228W ENO1P00924 437 aaKnown RBP8.75□□□□□ -1.01
SLX1YBR228W DAL1P32375 460 aa8.75□□□□□ -1.01
SLX1YBR228W ALA1P40825 983 aaKnown RBP8.75□□□□□ -1.01
SLX1YBR228W RDS2P19541 446 aaKnown RBP8.74□□□□□ -1.01
SLX1YBR228W NAM8Q00539 523 aaKnown RBP8.74□□□□□ -1.01
SLX1YBR228W TRK2P28584 889 aa8.73□□□□□ -1.01
SLX1YBR228W AHP1P38013 176 aaKnown RBP8.73□□□□□ -1.01
SLX1YBR228W YPR204WQ08995 1032 aa8.73□□□□□ -1.01
SLX1YBR228W CCP1P00431 361 aa8.72□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms