RNA–Protein interactions for RNA: YBL056W

PTC3, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC3, Length 1,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC3YBL056W INP54Q08227 384 aaKnown RBP8.19□□□□□ -1.1
PTC3YBL056W HSP104P31539 908 aaKnown RBP8.18□□□□□ -1.1
PTC3YBL056W CTF4Q01454 927 aa8.18□□□□□ -1.1
PTC3YBL056W BUD31P25337 157 aaPredicted RBP8.17□□□□□ -1.1
PTC3YBL056W PRD1P25375 712 aa8.17□□□□□ -1.1
PTC3YBL056W YKR023WP36119 530 aaKnown RBP8.17□□□□□ -1.1
PTC3YBL056W YKR075CP36155 307 aa8.17□□□□□ -1.1
PTC3YBL056W NTH2P35172 780 aa8.16□□□□□ -1.1
PTC3YBL056W MPP10P47083 593 aaKnown RBP8.16□□□□□ -1.1
PTC3YBL056W YDL144CQ07589 356 aa8.16□□□□□ -1.1
PTC3YBL056W NUP145P49687 1317 aa8.15□□□□□ -1.1
PTC3YBL056W OSM1P21375 501 aaKnown RBP8.15□□□□□ -1.1
PTC3YBL056W NPR2P39923 615 aa8.15□□□□□ -1.1
PTC3YBL056W THI22Q06490 572 aa8.15□□□□□ -1.1
PTC3YBL056W AOS1Q06624 347 aa8.14□□□□□ -1.11
PTC3YBL056W EDE1P34216 1381 aa8.14□□□□□ -1.11
PTC3YBL056W ATG13Q06628 738 aa8.13□□□□□ -1.11
PTC3YBL056W LAM6Q08001 693 aa8.13□□□□□ -1.11
PTC3YBL056W NSR1P27476 414 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
PTC3YBL056W YNL050CP53952 270 aa8.12□□□□□ -1.11
PTC3YBL056W RPP0P05317 312 aaKnown RBP8.12□□□□□ -1.11
PTC3YBL056W UBP1P25037 809 aa8.12□□□□□ -1.11
PTC3YBL056W PRP40P33203 583 aaKnown RBP8.12□□□□□ -1.11
PTC3YBL056W YJL181WP46987 611 aa8.12□□□□□ -1.11
PTC3YBL056W YCK3P39962 524 aa8.11□□□□□ -1.11
PTC3YBL056W RTT109Q07794 436 aa8.11□□□□□ -1.11
PTC3YBL056W VPS27P40343 622 aaKnown RBP8.1□□□□□ -1.11
PTC3YBL056W SAP155P43612 1002 aa8.1□□□□□ -1.11
PTC3YBL056W HEF3P53978 1044 aaKnown RBP8.1□□□□□ -1.11
PTC3YBL056W SUI2P20459 304 aaKnown RBP8.09□□□□□ -1.11
PTC3YBL056W KCC4P25389 1037 aa8.09□□□□□ -1.11
PTC3YBL056W PRS1P32895 427 aaKnown RBP8.09□□□□□ -1.11
PTC3YBL056W LYS4P49367 693 aaPredicted RBP8.09□□□□□ -1.11
PTC3YBL056W TPD3P31383 635 aa8.08□□□□□ -1.12
PTC3YBL056W YBP2P53169 641 aa8.08□□□□□ -1.12
PTC3YBL056W UGA3P26370 528 aa8.07□□□□□ -1.12
PTC3YBL056W ZDS1P50111 915 aaKnown RBP8.07□□□□□ -1.12
PTC3YBL056W CDC45Q08032 650 aa8.07□□□□□ -1.12
PTC3YBL056W TUM1Q08686 304 aaKnown RBP8.07□□□□□ -1.12
PTC3YBL056W GRX1P25373 110 aaKnown RBP8.06□□□□□ -1.12
PTC3YBL056W MAM1P40065 302 aa8.06□□□□□ -1.12
PTC3YBL056W OXP1P28273 1286 aa8.05□□□□□ -1.12
PTC3YBL056W RRT14P40470 206 aa8.05□□□□□ -1.12
PTC3YBL056W ALE1Q08548 619 aa8.05□□□□□ -1.12
PTC3YBL056W TFC8Q12308 588 aa8.05□□□□□ -1.12
PTC3YBL056W MSB4Q12317 492 aa8.05□□□□□ -1.12
PTC3YBL056W RIM15P43565 1770 aa8.05□□□□□ -1.12
PTC3YBL056W CTH1P47976 325 aa8.04□□□□□ -1.12
PTC3YBL056W GYP7P48365 746 aa8.04□□□□□ -1.12
PTC3YBL056W NSE3Q05541 303 aa8.04□□□□□ -1.12
PTC3YBL056W YBL086CP38177 466 aa8.03□□□□□ -1.12
PTC3YBL056W SSP1P38871 571 aa8.03□□□□□ -1.12
PTC3YBL056W RMT2Q03305 412 aa8.03□□□□□ -1.12
PTC3YBL056W BMS1Q08965 1183 aaKnown RBP8.03□□□□□ -1.12
PTC3YBL056W RVB2Q12464 471 aaKnown RBP8.03□□□□□ -1.12
PTC3YBL056W COQ4O13525 335 aa8.03□□□□□ -1.12
PTC3YBL056W RAD4P14736 754 aa8.03□□□□□ -1.12
PTC3YBL056W GRE2Q12068 342 aaKnown RBP8.03□□□□□ -1.12
PTC3YBL056W LYS2P07702 1392 aa8.02□□□□□ -1.13
PTC3YBL056W GTT3P39996 337 aa8.02□□□□□ -1.13
PTC3YBL056W NOP53Q12080 455 aaKnown RBP8.02□□□□□ -1.13
PTC3YBL056W YBR287WP38355 427 aa8.01□□□□□ -1.13
PTC3YBL056W ALD2P47771 506 aa8□□□□□ -1.13
PTC3YBL056W SSA2P10592 639 aaKnown RBP7.99□□□□□ -1.13
PTC3YBL056W BDF1P35817 686 aa7.99□□□□□ -1.13
PTC3YBL056W YRB30P53107 440 aaPredicted RBP7.99□□□□□ -1.13
PTC3YBL056W SRT1Q03175 343 aa7.99□□□□□ -1.13
PTC3YBL056W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
PTC3YBL056W HOP09932 586 aa7.98□□□□□ -1.13
PTC3YBL056W UGA2P38067 497 aa7.98□□□□□ -1.13
PTC3YBL056W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.98□□□□□ -1.13not detected
PTC3YBL056W YOL057WQ08225 711 aa7.98□□□□□ -1.13
PTC3YBL056W PHM7Q12252 991 aa7.98□□□□□ -1.13
PTC3YBL056W CDC27P38042 758 aa7.97□□□□□ -1.13
PTC3YBL056W MDG1P53885 366 aa7.97□□□□□ -1.13
PTC3YBL056W ZDS2P54786 942 aa7.97□□□□□ -1.13
PTC3YBL056W SSP2Q08646 371 aa7.97□□□□□ -1.13
PTC3YBL056W BUG1Q12191 341 aa7.97□□□□□ -1.13
PTC3YBL056W NYV1Q12255 253 aa7.97□□□□□ -1.13
PTC3YBL056W BUD27P43573 796 aaKnown RBP RIP-Chip data7.96□□□□□ -1.13not detected
PTC3YBL056W TEA1P47988 759 aa7.96□□□□□ -1.13
PTC3YBL056W ARG8P18544 423 aa7.95□□□□□ -1.14
PTC3YBL056W YFR016CP43597 1233 aaKnown RBP7.95□□□□□ -1.14
PTC3YBL056W UTP22P53254 1237 aaPredicted RBP7.95□□□□□ -1.14
PTC3YBL056W ALD3P54114 506 aa7.95□□□□□ -1.14
PTC3YBL056W YPR204WQ08995 1032 aa7.95□□□□□ -1.14
PTC3YBL056W DCD1P06773 312 aa7.94□□□□□ -1.14
PTC3YBL056W APL2P36000 726 aaPredicted RBP7.94□□□□□ -1.14
PTC3YBL056W TOS1P38288 455 aa7.94□□□□□ -1.14
PTC3YBL056W YIL092WP40497 633 aa7.94□□□□□ -1.14
PTC3YBL056W YDR306CQ06640 478 aa7.94□□□□□ -1.14
PTC3YBL056W MAK21Q12176 1025 aaKnown RBP7.94□□□□□ -1.14
PTC3YBL056W FUN12P39730 1002 aaKnown RBP7.93□□□□□ -1.14
PTC3YBL056W SER1P33330 395 aaKnown RBP7.92□□□□□ -1.14
PTC3YBL056W YGL082WP53155 381 aa7.92□□□□□ -1.14
PTC3YBL056W DNM1P54861 757 aa7.92□□□□□ -1.14
PTC3YBL056W VPS64Q03944 604 aa7.92□□□□□ -1.14
PTC3YBL056W SWI1P09547 1314 aa7.91□□□□□ -1.14
PTC3YBL056W MRP7P12687 371 aa7.91□□□□□ -1.14
PTC3YBL056W DAL5P15365 543 aa7.91□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 73.4 ms