RNA–Protein interactions for RNA: ENST00000641336.1

SAMMSON-213, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,521 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-213ENST00000641336 CHMP4AQ9BY43 222 aa7.86□□□□□ -1.15
SAMMSON-213ENST00000641336 BCL2L12Q9HB09 334 aa7.86□□□□□ -1.15
SAMMSON-213ENST00000641336 TRIM41Q8WV44 630 aa7.85□□□□□ -1.15
SAMMSON-213ENST00000641336 NBPF3Q9H094 633 aa7.85□□□□□ -1.15
SAMMSON-213ENST00000641336 CENPBP07199 599 aaPredicted RBP7.83□□□□□ -1.16
SAMMSON-213ENST00000641336 NYAP1Q6ZVC0 841 aa7.83□□□□□ -1.16
SAMMSON-213ENST00000641336 PRKD2Q9BZL6 878 aa7.83□□□□□ -1.16
SAMMSON-213ENST00000641336 HRCP23327 699 aa7.82□□□□□ -1.16
SAMMSON-213ENST00000641336 TREML4Q6UXN2 200 aa7.82□□□□□ -1.16
SAMMSON-213ENST00000641336 HSP90B1P14625 803 aaKnown RBP7.81□□□□□ -1.16
SAMMSON-213ENST00000641336 ANKK1Q8NFD2 765 aa7.81□□□□□ -1.16
SAMMSON-213ENST00000641336 PKNOX2Q96KN3 472 aa7.81□□□□□ -1.16
SAMMSON-213ENST00000641336 RIOK3O14730 519 aaKnown RBP7.8□□□□□ -1.16
SAMMSON-213ENST00000641336 VGFO15240 615 aaPredicted RBP7.79□□□□□ -1.16
SAMMSON-213ENST00000641336 PTPREP23469 700 aa7.79□□□□□ -1.16
SAMMSON-213ENST00000641336 BCAMP50895 628 aa7.79□□□□□ -1.16
SAMMSON-213ENST00000641336 MFRPQ9BY79 579 aa7.79□□□□□ -1.16
SAMMSON-213ENST00000641336 SUPT5HO00267 1087 aaKnown RBP7.78□□□□□ -1.16
SAMMSON-213ENST00000641336 TBC1D12O60347 775 aa7.78□□□□□ -1.16
SAMMSON-213ENST00000641336 V9GY48 417 aaPredicted RBP7.78□□□□□ -1.16
SAMMSON-213ENST00000641336 ZNF454Q8N9F8 522 aa7.78□□□□□ -1.16
SAMMSON-213ENST00000641336 STK17AQ9UEE5 414 aa7.78□□□□□ -1.16
SAMMSON-213ENST00000641336 PDZRN3Q9UPQ7 1066 aa7.78□□□□□ -1.16
SAMMSON-213ENST00000641336 SHROOM4Q9ULL8 1493 aa7.77□□□□□ -1.17
SAMMSON-213ENST00000641336 SOWAHBA6NEL2 793 aa7.77□□□□□ -1.17
SAMMSON-213ENST00000641336 RNF25Q96BH1 459 aaPredicted RBP7.77□□□□□ -1.17
SAMMSON-213ENST00000641336 WBP1LQ9NX94 342 aa7.76□□□□□ -1.17
SAMMSON-213ENST00000641336 POTECB2RU33 542 aa7.75□□□□□ -1.17
SAMMSON-213ENST00000641336 UBTFP17480 764 aaKnown RBP7.75□□□□□ -1.17
SAMMSON-213ENST00000641336 IFNLR1Q8IU57 520 aaPredicted RBP7.74□□□□□ -1.17
SAMMSON-213ENST00000641336 PLPP6Q8IY26 295 aa7.73□□□□□ -1.17
SAMMSON-213ENST00000641336 FOXK1P85037 733 aa7.72□□□□□ -1.17
SAMMSON-213ENST00000641336 FOSBP53539 338 aa7.71□□□□□ -1.18
SAMMSON-213ENST00000641336 ZNF326Q5BKZ1 582 aaKnown RBP7.7□□□□□ -1.18
SAMMSON-213ENST00000641336 RABGEF1Q9UJ41 708 aa7.7□□□□□ -1.18
SAMMSON-213ENST00000641336 BCCIPQ9P287 314 aaKnown RBP eCLIP7.69□□□□□ -1.18
SAMMSON-213ENST00000641336 CCDC9Q9Y3X0 531 aaKnown RBP7.69□□□□□ -1.18
SAMMSON-213ENST00000641336 CCDC180Q9P1Z9 1646 aa7.69□□□□□ -1.18
SAMMSON-213ENST00000641336 FGD1P98174 961 aa7.68□□□□□ -1.18
SAMMSON-213ENST00000641336 LAPTM4BQ86VI4 370 aa7.68□□□□□ -1.18
SAMMSON-213ENST00000641336 DHX37Q8IY37 1157 aaKnown RBP7.68□□□□□ -1.18
SAMMSON-213ENST00000641336 BCL11BQ9C0K0 894 aaPredicted RBP7.68□□□□□ -1.18
SAMMSON-213ENST00000641336 KDM2AQ9Y2K7 1162 aa7.67□□□□□ -1.18
SAMMSON-213ENST00000641336 ZFRQ96KR1 1074 aaKnown RBP7.66□□□□□ -1.18
SAMMSON-213ENST00000641336 PPP1R18Q6NYC8 613 aa7.65□□□□□ -1.18
SAMMSON-213ENST00000641336 PUS7Q96PZ0 661 aaKnown RBP7.64□□□□□ -1.19
SAMMSON-213ENST00000641336 ADAM33Q9BZ11 813 aa7.64□□□□□ -1.19
SAMMSON-213ENST00000641336 OXER1Q8TDS5 423 aa7.63□□□□□ -1.19
SAMMSON-213ENST00000641336 DSG2Q14126 1118 aa7.62□□□□□ -1.19
SAMMSON-213ENST00000641336 PROX2Q3B8N5 592 aa7.62□□□□□ -1.19
SAMMSON-213ENST00000641336 GPHNQ9NQX3 736 aaPredicted RBP7.62□□□□□ -1.19
SAMMSON-213ENST00000641336 TSR3Q9UJK0 312 aaKnown RBP7.62□□□□□ -1.19
SAMMSON-213ENST00000641336 STK24Q9Y6E0 443 aa7.62□□□□□ -1.19
SAMMSON-213ENST00000641336 WIPF1O43516 503 aa7.61□□□□□ -1.19
SAMMSON-213ENST00000641336 INSM1Q01101 510 aaPredicted RBP7.61□□□□□ -1.19
SAMMSON-213ENST00000641336 TJAP1Q5JTD0 557 aa7.61□□□□□ -1.19
SAMMSON-213ENST00000641336 RSPH4AQ5TD94 716 aa7.61□□□□□ -1.19
SAMMSON-213ENST00000641336 ZDHHC16Q969W1 377 aa7.61□□□□□ -1.19
SAMMSON-213ENST00000641336 JPH4Q96JJ6 628 aa7.61□□□□□ -1.19
SAMMSON-213ENST00000641336 PPP1R3GB7ZBB8 358 aa7.6□□□□□ -1.19
SAMMSON-213ENST00000641336 DGAT1O75907 488 aa7.6□□□□□ -1.19
SAMMSON-213ENST00000641336 WFS1O76024 890 aa7.6□□□□□ -1.19
SAMMSON-213ENST00000641336 SUZ12Q15022 739 aaKnown RBP7.6□□□□□ -1.19
SAMMSON-213ENST00000641336 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.6□□□□□ -1.19
SAMMSON-213ENST00000641336 IGSF3O75054 1194 aa7.59□□□□□ -1.19
SAMMSON-213ENST00000641336 PKDCCQ504Y2 493 aa7.59□□□□□ -1.19
SAMMSON-213ENST00000641336 TRIM67Q6ZTA4 783 aa7.59□□□□□ -1.19
SAMMSON-213ENST00000641336 PPP1R37O75864 691 aa7.58□□□□□ -1.2
SAMMSON-213ENST00000641336 HPS5Q9UPZ3 1129 aa7.58□□□□□ -1.2
SAMMSON-213ENST00000641336 ANP32EQ9BTT0 268 aa7.57□□□□□ -1.2
SAMMSON-213ENST00000641336 ANO8Q9HCE9 1232 aaPredicted RBP7.57□□□□□ -1.2
SAMMSON-213ENST00000641336 UPF1Q92900 1129 aaKnown RBP eCLIP7.56□□□□□ -1.2
SAMMSON-213ENST00000641336 POLR3GLQ9BT43 218 aa7.56□□□□□ -1.2
SAMMSON-213ENST00000641336 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.55□□□□□ -1.2
SAMMSON-213ENST00000641336 KIAA1468Q9P260 1216 aa7.55□□□□□ -1.2
SAMMSON-213ENST00000641336 COL9A1P20849 921 aa7.53□□□□□ -1.2
SAMMSON-213ENST00000641336 ZBTB7CA1YPR0 619 aa7.52□□□□□ -1.2
SAMMSON-213ENST00000641336 NFX1Q12986 1120 aaKnown RBP7.52□□□□□ -1.2
SAMMSON-213ENST00000641336 NBR1Q14596 966 aa7.52□□□□□ -1.2
SAMMSON-213ENST00000641336 LRCH3Q96II8 777 aa7.52□□□□□ -1.2
SAMMSON-213ENST00000641336 ARID3AQ99856 593 aa7.52□□□□□ -1.2
SAMMSON-213ENST00000641336 ERICH6BQ5W0A0 696 aa7.52□□□□□ -1.21
SAMMSON-213ENST00000641336 IL21Q9HBE4 155 aa7.52□□□□□ -1.21
SAMMSON-213ENST00000641336 SEPT9Q9UHD8 586 aaPredicted RBP7.52□□□□□ -1.21
SAMMSON-213ENST00000641336 ONECUT3O60422 494 aaPredicted RBP7.51□□□□□ -1.21
SAMMSON-213ENST00000641336 MTRQ99707 1265 aa7.51□□□□□ -1.21
SAMMSON-213ENST00000641336 FAM98CQ17RN3 349 aaKnown RBP7.49□□□□□ -1.21
SAMMSON-213ENST00000641336 RSPH6AQ9H0K4 717 aa7.49□□□□□ -1.21
SAMMSON-213ENST00000641336 ZCCHC6Q5VYS8 1495 aaKnown RBP7.49□□□□□ -1.21
SAMMSON-213ENST00000641336 STK25O00506 426 aa7.48□□□□□ -1.21
SAMMSON-213ENST00000641336 ZEB1P37275 1124 aaPredicted RBP7.48□□□□□ -1.21
SAMMSON-213ENST00000641336 PRR20EP86478 221 aa7.47□□□□□ -1.21
SAMMSON-213ENST00000641336 PRR20CP86479 221 aa7.47□□□□□ -1.21
SAMMSON-213ENST00000641336 PRR20DP86480 221 aa7.47□□□□□ -1.21
SAMMSON-213ENST00000641336 PRR20BP86481 221 aa7.47□□□□□ -1.21
SAMMSON-213ENST00000641336 PRR20AP86496 221 aa7.47□□□□□ -1.21
SAMMSON-213ENST00000641336 ZNF516Q92618 1163 aa7.47□□□□□ -1.21
SAMMSON-213ENST00000641336 AAASQ9NRG9 546 aa7.47□□□□□ -1.21
SAMMSON-213ENST00000641336 CLSPNQ9HAW4 1339 aa7.46□□□□□ -1.22
SAMMSON-213ENST00000641336 ST8SIA5O15466 376 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms