RNA–Protein interactions for RNA: ENST00000641179.1

CASC19-216, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,140 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-216ENST00000641179 CUX1P39880 1505 aa13.27□□□□□ -0.29
CASC19-216ENST00000641179 URB2Q14146 1524 aaKnown RBP13.27□□□□□ -0.29
CASC19-216ENST00000641179 WDR62O43379 1518 aa13.26□□□□□ -0.29
CASC19-216ENST00000641179 PPP1R15BQ5SWA1 713 aa13.26□□□□□ -0.29
CASC19-216ENST00000641179 BIVM-ERCC5R4GMW8 1640 aa13.24□□□□□ -0.29
CASC19-216ENST00000641179 GTPBP6O43824 516 aaPredicted RBP13.24□□□□□ -0.29
CASC19-216ENST00000641179 HCSTQ9UBK5 93 aa13.24□□□□□ -0.29
CASC19-216ENST00000641179 KIF21AQ7Z4S6 1674 aa13.23□□□□□ -0.29
CASC19-216ENST00000641179 SOGA1O94964 1423 aa13.22□□□□□ -0.29
CASC19-216ENST00000641179 SYNJ1O43426 1573 aa13.22□□□□□ -0.29
CASC19-216ENST00000641179 UPF1Q92900 1129 aaKnown RBP eCLIP13.21□□□□□ -0.29
CASC19-216ENST00000641179 EEA1Q15075 1411 aa13.21□□□□□ -0.3
CASC19-216ENST00000641179 PDE4AP27815 886 aa13.2□□□□□ -0.3
CASC19-216ENST00000641179 FGD5Q6ZNL6 1462 aa13.2□□□□□ -0.3
CASC19-216ENST00000641179 POLA1P09884 1462 aaPredicted RBP13.19□□□□□ -0.3
CASC19-216ENST00000641179 IFT140Q96RY7 1462 aa13.19□□□□□ -0.3
CASC19-216ENST00000641179 BCL2L12Q9HB09 334 aa13.19□□□□□ -0.3
CASC19-216ENST00000641179 ANO8Q9HCE9 1232 aaPredicted RBP13.19□□□□□ -0.3
CASC19-216ENST00000641179 CUX2O14529 1486 aa13.18□□□□□ -0.3
CASC19-216ENST00000641179 KCNK17Q96T54 332 aa13.18□□□□□ -0.3
CASC19-216ENST00000641179 THOC2Q8NI27 1593 aaKnown RBP13.18□□□□□ -0.3
CASC19-216ENST00000641179 FOSBP53539 338 aa13.17□□□□□ -0.3
CASC19-216ENST00000641179 MFSD10Q14728 455 aa13.16□□□□□ -0.3
CASC19-216ENST00000641179 SLC4A5Q9BY07 1137 aa13.16□□□□□ -0.3
CASC19-216ENST00000641179 ABCA10Q8WWZ4 1543 aa13.16□□□□□ -0.3
CASC19-216ENST00000641179 KIF27Q86VH2 1401 aa13.15□□□□□ -0.3
CASC19-216ENST00000641179 ZNF454Q8N9F8 522 aa13.15□□□□□ -0.3
CASC19-216ENST00000641179 KCNH8Q96L42 1107 aa13.15□□□□□ -0.3
CASC19-216ENST00000641179 VPS9D1Q9Y2B5 631 aa13.15□□□□□ -0.3
CASC19-216ENST00000641179 PLA2G2EQ9NZK7 142 aa13.13□□□□□ -0.31
CASC19-216ENST00000641179 JPH4Q96JJ6 628 aa13.12□□□□□ -0.31
CASC19-216ENST00000641179 WDR97A6NE52 1622 aa13.11□□□□□ -0.31
CASC19-216ENST00000641179 DDX27Q96GQ7 796 aaKnown RBP13.11□□□□□ -0.31
CASC19-216ENST00000641179 LARP6Q9BRS8 491 aaKnown RBP13.1□□□□□ -0.31
CASC19-216ENST00000641179 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
CASC19-216ENST00000641179 EVI5O60447 810 aa13.09□□□□□ -0.31
CASC19-216ENST00000641179 BHMG1C9JSJ3 638 aaPredicted RBP13.08□□□□□ -0.32
CASC19-216ENST00000641179 TARBP1Q13395 1621 aaKnown RBP13.07□□□□□ -0.32
CASC19-216ENST00000641179 KCTD12Q96CX2 325 aaKnown RBP13.07□□□□□ -0.32
CASC19-216ENST00000641179 IGF1RP08069 1367 aa13.07□□□□□ -0.32
CASC19-216ENST00000641179 PTPREP23469 700 aa13.06□□□□□ -0.32
CASC19-216ENST00000641179 ZBED2Q9BTP6 218 aa13.06□□□□□ -0.32
CASC19-216ENST00000641179 TDRD9Q8NDG6 1382 aaKnown RBP13.06□□□□□ -0.32
CASC19-216ENST00000641179 EMILIN3Q9NT22 766 aa13.05□□□□□ -0.32
CASC19-216ENST00000641179 GAPVD1Q14C86 1478 aa13.04□□□□□ -0.32
CASC19-216ENST00000641179 ZDHHC16Q969W1 377 aa13.04□□□□□ -0.32
CASC19-216ENST00000641179 STAC3Q96MF2 364 aa13.03□□□□□ -0.32
CASC19-216ENST00000641179 ADAM33Q9BZ11 813 aa13.03□□□□□ -0.32
CASC19-216ENST00000641179 GRIN2BQ13224 1484 aa13.02□□□□□ -0.33
CASC19-216ENST00000641179 CADPS2Q86UW7 1296 aa13.01□□□□□ -0.33
CASC19-216ENST00000641179 ERICH3Q5RHP9 1530 aa13.01□□□□□ -0.33
CASC19-216ENST00000641179 AQRO60306 1485 aaKnown RBP eCLIP13□□□□□ -0.333e-6■■■■□ 24.7
CASC19-216ENST00000641179 MAP3K9P80192 1104 aa12.99□□□□□ -0.33
CASC19-216ENST00000641179 CARMIL1Q5VZK9 1371 aa12.98□□□□□ -0.33
CASC19-216ENST00000641179 RUSC2Q8N2Y8 1516 aa12.98□□□□□ -0.33
CASC19-216ENST00000641179 FAM9AQ8IZU1 332 aaPredicted RBP12.97□□□□□ -0.33
CASC19-216ENST00000641179 ZNF608Q9ULD9 1512 aaPredicted RBP12.97□□□□□ -0.33
CASC19-216ENST00000641179 PRXQ9BXM0 1461 aa12.97□□□□□ -0.33
CASC19-216ENST00000641179 ABCA5Q8WWZ7 1642 aa12.96□□□□□ -0.33
CASC19-216ENST00000641179 THSD4Q6ZMP0 1018 aa12.96□□□□□ -0.33
CASC19-216ENST00000641179 PCDHGA10Q9Y5H3 936 aa12.96□□□□□ -0.33
CASC19-216ENST00000641179 CAMK2BQ13554 666 aa12.95□□□□□ -0.34
CASC19-216ENST00000641179 MAGI1Q96QZ7 1491 aaPredicted RBP12.95□□□□□ -0.34
CASC19-216ENST00000641179 FHAD1B1AJZ9 1412 aa12.95□□□□□ -0.34
CASC19-216ENST00000641179 PPP1R3GB7ZBB8 358 aa12.94□□□□□ -0.34
CASC19-216ENST00000641179 IFFO2Q5TF58 517 aa12.94□□□□□ -0.34
CASC19-216ENST00000641179 RAPGEF2Q9Y4G8 1499 aa12.92□□□□□ -0.34
CASC19-216ENST00000641179 MRPL50Q8N5N7 158 aaKnown RBP12.92□□□□□ -0.34
CASC19-216ENST00000641179 PHF14O94880 888 aa12.91□□□□□ -0.34
CASC19-216ENST00000641179 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
CASC19-216ENST00000641179 PTPN5P54829 565 aa12.9□□□□□ -0.34
CASC19-216ENST00000641179 CHMP7Q8WUX9 453 aaPredicted RBP12.9□□□□□ -0.34
CASC19-216ENST00000641179 FBXW7Q969H0 707 aa12.9□□□□□ -0.34
CASC19-216ENST00000641179 EIF4G3O43432 1585 aaKnown RBP12.9□□□□□ -0.35
CASC19-216ENST00000641179 WNT2BQ93097 391 aa12.89□□□□□ -0.35
CASC19-216ENST00000641179 CUL7Q14999 1698 aa12.89□□□□□ -0.35
CASC19-216ENST00000641179 TYW1BQ6NUM6 668 aa12.88□□□□□ -0.35
CASC19-216ENST00000641179 RABGEF1Q9UJ41 708 aa12.88□□□□□ -0.35
CASC19-216ENST00000641179 SYNJ2O15056 1496 aa12.88□□□□□ -0.35
CASC19-216ENST00000641179 GOLGA3Q08378 1498 aa12.88□□□□□ -0.35
CASC19-216ENST00000641179 COL9A1P20849 921 aa12.87□□□□□ -0.35
CASC19-216ENST00000641179 KIF21BO75037 1637 aa12.87□□□□□ -0.35
CASC19-216ENST00000641179 TNIKQ9UKE5 1360 aa12.86□□□□□ -0.35
CASC19-216ENST00000641179 SNAPC4Q5SXM2 1469 aa12.85□□□□□ -0.35
CASC19-216ENST00000641179 GOLGA8CPA6NN73 597 aa12.85□□□□□ -0.35
CASC19-216ENST00000641179 UBTFP17480 764 aaKnown RBP12.85□□□□□ -0.35
CASC19-216ENST00000641179 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
CASC19-216ENST00000641179 EPAS1Q99814 870 aa12.82□□□□□ -0.36
CASC19-216ENST00000641179 GRIN2AQ12879 1464 aa12.81□□□□□ -0.36
CASC19-216ENST00000641179 LOC105371045A0A1W2PR82 267 aa12.81□□□□□ -0.36
CASC19-216ENST00000641179 ADAMTS12P58397 1594 aa12.81□□□□□ -0.36
CASC19-216ENST00000641179 DPYSL4O14531 572 aa12.8□□□□□ -0.36
CASC19-216ENST00000641179 ONECUT3O60422 494 aaPredicted RBP12.8□□□□□ -0.36
CASC19-216ENST00000641179 RGS20O76081 388 aa12.8□□□□□ -0.36
CASC19-216ENST00000641179 LAPTM4BQ86VI4 370 aa12.8□□□□□ -0.36
CASC19-216ENST00000641179 BBXQ8WY36 941 aaPredicted RBP12.8□□□□□ -0.36
CASC19-216ENST00000641179 PBRM1Q86U86 1689 aa12.8□□□□□ -0.36
CASC19-216ENST00000641179 KIAA0586Q9BVV6 1533 aa12.78□□□□□ -0.36
CASC19-216ENST00000641179 C6orf132Q5T0Z8 1188 aa12.77□□□□□ -0.37
CASC19-216ENST00000641179 NUP160Q12769 1436 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms