RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 PCGF6Q9BYE7 350 aa13.74□□□□□ -0.21
SCARB2-225ENST00000640900 RRP7BPQ9NSQ0 103 aa13.74□□□□□ -0.21
SCARB2-225ENST00000640900 AGLP35573 1532 aa13.74□□□□□ -0.21
SCARB2-225ENST00000640900 A2MP01023 1474 aa13.74□□□□□ -0.21
SCARB2-225ENST00000640900 ANKRD50Q9ULJ7 1429 aa13.73□□□□□ -0.21
SCARB2-225ENST00000640900 MAPK8IP2Q13387 824 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-225ENST00000640900 EIF2AK4Q9P2K8 1649 aaKnown RBP13.72□□□□□ -0.21
SCARB2-225ENST00000640900 SIGLEC1Q9BZZ2 1709 aa13.7□□□□□ -0.22
SCARB2-225ENST00000640900 RAB3GAP2Q9H2M9 1393 aa13.7□□□□□ -0.22
SCARB2-225ENST00000640900 DEPDC5O75140 1603 aa13.68□□□□□ -0.22
SCARB2-225ENST00000640900 RNF17Q9BXT8 1623 aaKnown RBP13.68□□□□□ -0.22
SCARB2-225ENST00000640900 ACIN1Q9UKV3 1341 aaKnown RBP13.68□□□□□ -0.22
SCARB2-225ENST00000640900 CNKSR2Q8WXI2 1034 aa13.67□□□□□ -0.22
SCARB2-225ENST00000640900 MROH1Q8NDA8 1641 aa13.67□□□□□ -0.22
SCARB2-225ENST00000640900 UNC13BO14795 1591 aa13.66□□□□□ -0.22
SCARB2-225ENST00000640900 VWDEQ8N2E2 1590 aa13.66□□□□□ -0.22
SCARB2-225ENST00000640900 KDM5DQ9BY66 1539 aa13.66□□□□□ -0.22
SCARB2-225ENST00000640900 PRDM15P57071 1507 aaPredicted RBP13.64□□□□□ -0.23
SCARB2-225ENST00000640900 MYT1LQ9UL68 1186 aa13.63□□□□□ -0.23
SCARB2-225ENST00000640900 KIF3BO15066 747 aa13.62□□□□□ -0.23
SCARB2-225ENST00000640900 FAM135AQ9P2D6 1515 aa13.62□□□□□ -0.23
SCARB2-225ENST00000640900 LMTK2Q8IWU2 1503 aa13.61□□□□□ -0.23
SCARB2-225ENST00000640900 KCNA4P22459 653 aa13.61□□□□□ -0.23
SCARB2-225ENST00000640900 PZPP20742 1482 aa13.61□□□□□ -0.23
SCARB2-225ENST00000640900 IQGAP3Q86VI3 1631 aa13.61□□□□□ -0.23
SCARB2-225ENST00000640900 DMRT2Q9Y5R5 561 aa13.59□□□□□ -0.23
SCARB2-225ENST00000640900 ABCC3O15438 1527 aa13.57□□□□□ -0.24
SCARB2-225ENST00000640900 NUP155O75694 1391 aa13.57□□□□□ -0.24
SCARB2-225ENST00000640900 ZC3H13Q5T200 1668 aaKnown RBP13.55□□□□□ -0.24
SCARB2-225ENST00000640900 DHX57Q6P158 1386 aaKnown RBP13.55□□□□□ -0.24
SCARB2-225ENST00000640900 ARHGAP31Q2M1Z3 1444 aa13.55□□□□□ -0.24
SCARB2-225ENST00000640900 ADAMTSL3P82987 1691 aa13.54□□□□□ -0.24
SCARB2-225ENST00000640900 MPHOSPH9Q99550 1183 aa13.54□□□□□ -0.24
SCARB2-225ENST00000640900 TET3O43151 1660 aa13.53□□□□□ -0.24
SCARB2-225ENST00000640900 GGT6Q6P531 493 aa13.53□□□□□ -0.24
SCARB2-225ENST00000640900 KANK1Q14678 1352 aa13.53□□□□□ -0.24
SCARB2-225ENST00000640900 CNTLNQ9NXG0 1405 aa13.52□□□□□ -0.25
SCARB2-225ENST00000640900 EFCAB6Q5THR3 1501 aa13.52□□□□□ -0.25
SCARB2-225ENST00000640900 RPRD2Q5VT52 1461 aaKnown RBP13.51□□□□□ -0.25
SCARB2-225ENST00000640900 TRIM52Q96A61 297 aa13.51□□□□□ -0.25
SCARB2-225ENST00000640900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.51□□□□□ -0.25
SCARB2-225ENST00000640900 CEP152O94986 1710 aa13.5□□□□□ -0.25
SCARB2-225ENST00000640900 MROH2AA6NES4 1674 aa13.5□□□□□ -0.25
SCARB2-225ENST00000640900 WASHC2CQ9Y4E1 1318 aa13.5□□□□□ -0.25
SCARB2-225ENST00000640900 PTPRTO14522 1441 aa13.49□□□□□ -0.25
SCARB2-225ENST00000640900 NPATQ14207 1427 aa13.49□□□□□ -0.25
SCARB2-225ENST00000640900 ARID4BQ4LE39 1312 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-225ENST00000640900 SLC4A1APQ9BWU0 796 aaKnown RBP13.49□□□□□ -0.25
SCARB2-225ENST00000640900 E9PCH4 1651 aa13.49□□□□□ -0.25
SCARB2-225ENST00000640900 CAMSAP1Q5T5Y3 1602 aa13.49□□□□□ -0.25
SCARB2-225ENST00000640900 PLA2R1Q13018 1463 aa13.48□□□□□ -0.25
SCARB2-225ENST00000640900 NOS1P29475 1434 aa13.47□□□□□ -0.25
SCARB2-225ENST00000640900 ANKRD30BQ9BXX2 1392 aa13.47□□□□□ -0.25
SCARB2-225ENST00000640900 CLTCQ00610 1675 aaKnown RBP13.47□□□□□ -0.25
SCARB2-225ENST00000640900 CLSPNQ9HAW4 1339 aa13.47□□□□□ -0.25
SCARB2-225ENST00000640900 PKD2Q13563 968 aa13.47□□□□□ -0.25
SCARB2-225ENST00000640900 ZMYM3Q14202 1370 aa13.46□□□□□ -0.25
SCARB2-225ENST00000640900 FER1L4A9Z1Z3 1794 aa13.46□□□□□ -0.25
SCARB2-225ENST00000640900 MLECQ14165 292 aa13.46□□□□□ -0.25
SCARB2-225ENST00000640900 MADDQ8WXG6 1647 aa13.46□□□□□ -0.26
SCARB2-225ENST00000640900 SPATA31D1Q6ZQQ2 1576 aa13.44□□□□□ -0.26
SCARB2-225ENST00000640900 ERVK-7P63135 1459 aa13.42□□□□□ -0.26
SCARB2-225ENST00000640900 KDM4FA0A1W2PPD8 638 aa13.42□□□□□ -0.26
SCARB2-225ENST00000640900 C3P01024 1663 aa13.42□□□□□ -0.26
SCARB2-225ENST00000640900 TRPM2O94759 1503 aa13.42□□□□□ -0.26
SCARB2-225ENST00000640900 SYNMO15061 1565 aa13.41□□□□□ -0.26
SCARB2-225ENST00000640900 PREX1Q8TCU6 1659 aa13.4□□□□□ -0.26
SCARB2-225ENST00000640900 PIK3C2BO00750 1634 aa13.4□□□□□ -0.26
SCARB2-225ENST00000640900 SPHKAPQ2M3C7 1700 aa13.4□□□□□ -0.26
SCARB2-225ENST00000640900 NPM3O75607 178 aaKnown RBP13.4□□□□□ -0.26
SCARB2-225ENST00000640900 RIMS1Q86UR5 1692 aaKnown RBP13.4□□□□□ -0.26
SCARB2-225ENST00000640900 FBXO31Q5XUX0 539 aaPredicted RBP13.39□□□□□ -0.27
SCARB2-225ENST00000640900 PTPRMP28827 1452 aa13.39□□□□□ -0.27
SCARB2-225ENST00000640900 NEURL4Q96JN8 1562 aa13.38□□□□□ -0.27
SCARB2-225ENST00000640900 ESF1Q9H501 851 aaKnown RBP13.38□□□□□ -0.27
SCARB2-225ENST00000640900 RNF216Q9NWF9 866 aaPredicted RBP13.37□□□□□ -0.27
SCARB2-225ENST00000640900 SLC52A1Q9NWF4 448 aa13.36□□□□□ -0.27
SCARB2-225ENST00000640900 CLTCL1P53675 1640 aa13.35□□□□□ -0.27
SCARB2-225ENST00000640900 SETD1BQ9UPS6 1966 aaKnown RBP13.35□□□□□ -0.27
SCARB2-225ENST00000640900 CEBPAP49715 358 aaPredicted RBP13.35□□□□□ -0.27
SCARB2-225ENST00000640900 CCER1Q8TC90 406 aaPredicted RBP13.35□□□□□ -0.27
SCARB2-225ENST00000640900 SPATA31E1Q6ZUB1 1445 aa13.35□□□□□ -0.27
SCARB2-225ENST00000640900 CFAP65Q6ZU64 1925 aaKnown RBP13.35□□□□□ -0.27
SCARB2-225ENST00000640900 TNRQ92752 1358 aa13.34□□□□□ -0.27
SCARB2-225ENST00000640900 UGGT1Q9NYU2 1555 aa13.33□□□□□ -0.28
SCARB2-225ENST00000640900 CCDC144AA2RUR9 1427 aa13.33□□□□□ -0.28
SCARB2-225ENST00000640900 IDI1Q13907 227 aa13.33□□□□□ -0.28
SCARB2-225ENST00000640900 POTEDQ86YR6 584 aa13.33□□□□□ -0.28
SCARB2-225ENST00000640900 NLRP1Q9C000 1473 aa13.33□□□□□ -0.28
SCARB2-225ENST00000640900 KDM5AP29375 1690 aaKnown RBP13.33□□□□□ -0.28
SCARB2-225ENST00000640900 SIN3AQ96ST3 1273 aa13.32□□□□□ -0.28
SCARB2-225ENST00000640900 ADGRB3O60242 1522 aa13.31□□□□□ -0.28
SCARB2-225ENST00000640900 TMEM131LA2VDJ0 1609 aa13.31□□□□□ -0.28
SCARB2-225ENST00000640900 TIMELESSQ9UNS1 1208 aa13.3□□□□□ -0.28
SCARB2-225ENST00000640900 A2ML1A8K2U0 1454 aa13.28□□□□□ -0.28
SCARB2-225ENST00000640900 MYO3AQ8NEV4 1616 aa13.28□□□□□ -0.28
SCARB2-225ENST00000640900 ZNF142P52746 1687 aaPredicted RBP13.28□□□□□ -0.28
SCARB2-225ENST00000640900 DCAF8L1A6NGE4 600 aa13.27□□□□□ -0.29
SCARB2-225ENST00000640900 KIF1BO60333 1816 aa13.26□□□□□ -0.29
SCARB2-225ENST00000640900 UBR1Q8IWV7 1749 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms