RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 SMARCA2P51531 1590 aa18.44■□□□□ 0.54
HNRNPU-226ENST00000640218 AMPHP49418 695 aa18.44■□□□□ 0.54
HNRNPU-226ENST00000640218 HSP90B1P14625 803 aaKnown RBP18.44■□□□□ 0.54
HNRNPU-226ENST00000640218 HMMRO75330 724 aa18.43■□□□□ 0.54
HNRNPU-226ENST00000640218 HTATSF1O43719 755 aaKnown RBP18.43■□□□□ 0.54
HNRNPU-226ENST00000640218 EVA1CP58658 441 aa18.42■□□□□ 0.54
HNRNPU-226ENST00000640218 TRAK1Q9UPV9 953 aa18.41■□□□□ 0.54
HNRNPU-226ENST00000640218 KIAA2012Q0VF49 1180 aa18.41■□□□□ 0.54
HNRNPU-226ENST00000640218 PRM3Q9NNZ6 103 aa18.41■□□□□ 0.54
HNRNPU-226ENST00000640218 CENPJQ9HC77 1338 aaPredicted RBP18.41■□□□□ 0.54
HNRNPU-226ENST00000640218 FHOD3Q2V2M9 1422 aa18.41■□□□□ 0.54
HNRNPU-226ENST00000640218 NOL8Q76FK4 1167 aaKnown RBP18.4■□□□□ 0.54
HNRNPU-226ENST00000640218 NLRP13Q86W25 1043 aa18.4■□□□□ 0.54
HNRNPU-226ENST00000640218 SYAP1Q96A49 352 aaPredicted RBP18.39■□□□□ 0.53
HNRNPU-226ENST00000640218 FOXD4L1Q9NU39 408 aa18.39■□□□□ 0.53
HNRNPU-226ENST00000640218 HDAC5Q9UQL6 1122 aa18.39■□□□□ 0.53
HNRNPU-226ENST00000640218 LMOD3Q0VAK6 560 aa18.38■□□□□ 0.53
HNRNPU-226ENST00000640218 RRP7AQ9Y3A4 280 aaKnown RBP18.37■□□□□ 0.53
HNRNPU-226ENST00000640218 CCDC18Q5T9S5 1454 aa18.37■□□□□ 0.53
HNRNPU-226ENST00000640218 RSPH4AQ5TD94 716 aa18.35■□□□□ 0.53
HNRNPU-226ENST00000640218 GTF2E1P29083 439 aaPredicted RBP18.35■□□□□ 0.53
HNRNPU-226ENST00000640218 TPM4P67936 248 aa18.34■□□□□ 0.53
HNRNPU-226ENST00000640218 RAPGEF2Q9Y4G8 1499 aa18.34■□□□□ 0.53
HNRNPU-226ENST00000640218 PDE3BQ13370 1112 aa18.32■□□□□ 0.52
HNRNPU-226ENST00000640218 PANK3Q9H999 370 aa18.32■□□□□ 0.52
HNRNPU-226ENST00000640218 TOMM22Q9NS69 142 aa18.32■□□□□ 0.52
HNRNPU-226ENST00000640218 WIZO95785 1651 aa18.32■□□□□ 0.52
HNRNPU-226ENST00000640218 KIF15Q9NS87 1388 aa18.31■□□□□ 0.52
HNRNPU-226ENST00000640218 ARID3AQ99856 593 aa18.31■□□□□ 0.52
HNRNPU-226ENST00000640218 FRAT2O75474 233 aaPredicted RBP18.31■□□□□ 0.52
HNRNPU-226ENST00000640218 RASSF8Q8NHQ8 419 aa18.31■□□□□ 0.52
HNRNPU-226ENST00000640218 ST20-MTHFSA0A0A6YYL1 179 aa18.31■□□□□ 0.52
HNRNPU-226ENST00000640218 NOC3LQ8WTT2 800 aaKnown RBP18.31■□□□□ 0.52
HNRNPU-226ENST00000640218 JPH4Q96JJ6 628 aa18.3■□□□□ 0.52
HNRNPU-226ENST00000640218 GOLGA6L3A6NEY3 463 aa18.3■□□□□ 0.52
HNRNPU-226ENST00000640218 ELL2O00472 640 aaPredicted RBP18.3■□□□□ 0.52
HNRNPU-226ENST00000640218 IPO9Q96P70 1041 aaKnown RBP18.3■□□□□ 0.52
HNRNPU-226ENST00000640218 CREBRFQ8IUR6 639 aa18.29■□□□□ 0.52
HNRNPU-226ENST00000640218 PIP4K2BP78356 416 aa18.29■□□□□ 0.52
HNRNPU-226ENST00000640218 SYTL4Q96C24 671 aaPredicted RBP18.29■□□□□ 0.52
HNRNPU-226ENST00000640218 CCDC34Q96HJ3 373 aa18.29■□□□□ 0.52
HNRNPU-226ENST00000640218 PHLDB1Q86UU1 1377 aa18.29■□□□□ 0.52
HNRNPU-226ENST00000640218 CSPP1Q1MSJ5 1256 aa18.29■□□□□ 0.52
HNRNPU-226ENST00000640218 FOXD4L5Q5VV16 416 aaPredicted RBP18.29■□□□□ 0.52
HNRNPU-226ENST00000640218 FOXD4L4Q8WXT5 416 aaPredicted RBP18.29■□□□□ 0.52
HNRNPU-226ENST00000640218 MYBBP1AQ9BQG0 1328 aaKnown RBP18.28■□□□□ 0.52
HNRNPU-226ENST00000640218 ANO8Q9HCE9 1232 aaPredicted RBP18.28■□□□□ 0.52
HNRNPU-226ENST00000640218 CCDC144AA2RUR9 1427 aa18.28■□□□□ 0.52
HNRNPU-226ENST00000640218 BCL2L13Q9BXK5 485 aa18.28■□□□□ 0.52
HNRNPU-226ENST00000640218 SF3B2Q13435 895 aaKnown RBP18.27■□□□□ 0.52
HNRNPU-226ENST00000640218 ST18O60284 1047 aa18.27■□□□□ 0.52
HNRNPU-226ENST00000640218 KIF16BQ96L93 1317 aa18.26■□□□□ 0.51
HNRNPU-226ENST00000640218 RILPL2Q969X0 211 aa18.26■□□□□ 0.51
HNRNPU-226ENST00000640218 TOP2AP11388 1531 aaKnown RBP18.25■□□□□ 0.51
HNRNPU-226ENST00000640218 COG3Q96JB2 828 aa18.25■□□□□ 0.51
HNRNPU-226ENST00000640218 TSHZ2Q9NRE2 1034 aa18.24■□□□□ 0.51
HNRNPU-226ENST00000640218 ANKRD45Q5TZF3 282 aa18.24■□□□□ 0.51
HNRNPU-226ENST00000640218 PLIN1O60240 522 aa18.23■□□□□ 0.51
HNRNPU-226ENST00000640218 C1orf141Q5JVX7 400 aa18.23■□□□□ 0.51
HNRNPU-226ENST00000640218 PDE4CQ08493 712 aa18.23■□□□□ 0.51
HNRNPU-226ENST00000640218 FBXW7Q969H0 707 aa18.23■□□□□ 0.51
HNRNPU-226ENST00000640218 SF3A1Q15459 793 aaKnown RBP18.22■□□□□ 0.51
HNRNPU-226ENST00000640218 CWC22Q9HCG8 908 aaKnown RBP18.22■□□□□ 0.51
HNRNPU-226ENST00000640218 CADPSQ9ULU8 1353 aa18.22■□□□□ 0.51
HNRNPU-226ENST00000640218 CGNL1Q0VF96 1302 aa18.22■□□□□ 0.51
HNRNPU-226ENST00000640218 VPS53Q5VIR6 699 aa18.21■□□□□ 0.51
HNRNPU-226ENST00000640218 EVC2Q86UK5 1308 aa18.21■□□□□ 0.51
HNRNPU-226ENST00000640218 UACAQ9BZF9 1416 aa18.2■□□□□ 0.5
HNRNPU-226ENST00000640218 MARCH6O60337 910 aa18.2■□□□□ 0.5
HNRNPU-226ENST00000640218 MINK1Q8N4C8 1332 aaPredicted RBP18.19■□□□□ 0.5
HNRNPU-226ENST00000640218 VGFO15240 615 aaPredicted RBP18.19■□□□□ 0.5
HNRNPU-226ENST00000640218 KIF3AQ9Y496 699 aa18.19■□□□□ 0.5
HNRNPU-226ENST00000640218 NGEFQ8N5V2 710 aa18.19■□□□□ 0.5
HNRNPU-226ENST00000640218 H3BQV1 296 aa18.19■□□□□ 0.5
HNRNPU-226ENST00000640218 IFFO2Q5TF58 517 aa18.19■□□□□ 0.5
HNRNPU-226ENST00000640218 PHF14O94880 888 aa18.18■□□□□ 0.5
HNRNPU-226ENST00000640218 CENPQQ7L2Z9 268 aaPredicted RBP18.18■□□□□ 0.5
HNRNPU-226ENST00000640218 NUTM2BA6NNL0 878 aaPredicted RBP18.18■□□□□ 0.5
HNRNPU-226ENST00000640218 NUTM2EB1AL46 878 aaPredicted RBP18.18■□□□□ 0.5
HNRNPU-226ENST00000640218 ZKSCAN2Q63HK3 967 aa18.18■□□□□ 0.5
HNRNPU-226ENST00000640218 NUTM2AQ8IVF1 878 aaPredicted RBP18.18■□□□□ 0.5
HNRNPU-226ENST00000640218 E9PSI1 815 aa18.17■□□□□ 0.5
HNRNPU-226ENST00000640218 TEFQ10587 303 aa18.17■□□□□ 0.5
HNRNPU-226ENST00000640218 EIF2S2P20042 333 aaKnown RBP18.16■□□□□ 0.5
HNRNPU-226ENST00000640218 FOXD4L6Q3SYB3 417 aaPredicted RBP18.16■□□□□ 0.5
HNRNPU-226ENST00000640218 FOXD4L3Q6VB84 417 aaPredicted RBP18.16■□□□□ 0.5
HNRNPU-226ENST00000640218 CRBNQ96SW2 442 aa18.16■□□□□ 0.5
HNRNPU-226ENST00000640218 FAM184AQ8NB25 1140 aa18.15■□□□□ 0.5
HNRNPU-226ENST00000640218 EXOC6Q8TAG9 804 aa18.15■□□□□ 0.5
HNRNPU-226ENST00000640218 COG6Q9Y2V7 657 aa18.15■□□□□ 0.5
HNRNPU-226ENST00000640218 USP47Q96K76 1375 aa18.14■□□□□ 0.5
HNRNPU-226ENST00000640218 A0A0U1RQG5 324 aaPredicted RBP18.14■□□□□ 0.49
HNRNPU-226ENST00000640218 PES1O00541 588 aaKnown RBP18.14■□□□□ 0.49
HNRNPU-226ENST00000640218 NECTIN2Q92692 538 aa18.14■□□□□ 0.49
HNRNPU-226ENST00000640218 DHX57Q6P158 1386 aaKnown RBP18.14■□□□□ 0.49
HNRNPU-226ENST00000640218 RAD21O60216 631 aa18.14■□□□□ 0.49
HNRNPU-226ENST00000640218 FAM161AQ3B820 660 aa18.13■□□□□ 0.49
HNRNPU-226ENST00000640218 RRP1P56182 461 aaKnown RBP18.13■□□□□ 0.49
HNRNPU-226ENST00000640218 OSCARQ8IYS5 282 aa18.13■□□□□ 0.49
HNRNPU-226ENST00000640218 SLC4A3P48751 1232 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms