RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 GRIN2BQ13224 1484 aa10.78□□□□□ -0.68
HNRNPU-222ENST00000639880 MAPKBP1O60336 1514 aa10.77□□□□□ -0.69
HNRNPU-222ENST00000639880 MIA2Q96PC5 1412 aa10.77□□□□□ -0.69
HNRNPU-222ENST00000639880 BCL2L13Q9BXK5 485 aa10.77□□□□□ -0.69
HNRNPU-222ENST00000639880 MAP3K1Q13233 1512 aa10.77□□□□□ -0.69
HNRNPU-222ENST00000639880 MLECQ14165 292 aa10.76□□□□□ -0.69
HNRNPU-222ENST00000639880 C14orf37Q86TY3 774 aa10.76□□□□□ -0.69
HNRNPU-222ENST00000639880 ZBTB7CA1YPR0 619 aa10.76□□□□□ -0.69
HNRNPU-222ENST00000639880 SOX12O15370 315 aa10.76□□□□□ -0.69
HNRNPU-222ENST00000639880 PNISRQ8TF01 805 aaKnown RBP10.76□□□□□ -0.69
HNRNPU-222ENST00000639880 ARID4BQ4LE39 1312 aaPredicted RBP10.75□□□□□ -0.69
HNRNPU-222ENST00000639880 EPRSP07814 1512 aaKnown RBP10.75□□□□□ -0.69
HNRNPU-222ENST00000639880 SUPT6HQ7KZ85 1726 aaKnown RBP10.75□□□□□ -0.69
HNRNPU-222ENST00000639880 DAPK1P53355 1430 aa10.75□□□□□ -0.69
HNRNPU-222ENST00000639880 EIF3AQ14152 1382 aaKnown RBP10.75□□□□□ -0.69
HNRNPU-222ENST00000639880 CENPJQ9HC77 1338 aaPredicted RBP10.74□□□□□ -0.69
HNRNPU-222ENST00000639880 MS4A1P11836 297 aa10.74□□□□□ -0.69
HNRNPU-222ENST00000639880 PTPRKQ15262 1439 aa10.74□□□□□ -0.69
HNRNPU-222ENST00000639880 NCLP19338 710 aaKnown RBP10.73□□□□□ -0.69
HNRNPU-222ENST00000639880 ADAMTS8Q9UP79 889 aa10.73□□□□□ -0.69
HNRNPU-222ENST00000639880 KIAA1107Q9UPP5 1409 aa10.73□□□□□ -0.69
HNRNPU-222ENST00000639880 ITPRIPQ8IWB1 547 aa10.73□□□□□ -0.69
HNRNPU-222ENST00000639880 COG6Q9Y2V7 657 aa10.72□□□□□ -0.69
HNRNPU-222ENST00000639880 WASHC2CQ9Y4E1 1318 aa10.72□□□□□ -0.69
HNRNPU-222ENST00000639880 BRD4O60885 1362 aaPredicted RBP10.72□□□□□ -0.69
HNRNPU-222ENST00000639880 ANKRD30BQ9BXX2 1392 aa10.71□□□□□ -0.69
HNRNPU-222ENST00000639880 CENPQQ7L2Z9 268 aaPredicted RBP10.71□□□□□ -0.69
HNRNPU-222ENST00000639880 RWDD1Q9H446 243 aaPredicted RBP10.71□□□□□ -0.69
HNRNPU-222ENST00000639880 TRIM44Q96DX7 344 aaPredicted RBP10.71□□□□□ -0.69
HNRNPU-222ENST00000639880 SMC4Q9NTJ3 1288 aa10.71□□□□□ -0.69
HNRNPU-222ENST00000639880 TROQ12816 1431 aaPredicted RBP10.71□□□□□ -0.7
HNRNPU-222ENST00000639880 AFAP1Q8N556 730 aa10.71□□□□□ -0.7
HNRNPU-222ENST00000639880 HSP90AB1P08238 724 aaKnown RBP10.7□□□□□ -0.7
HNRNPU-222ENST00000639880 GOLGA6L22H0YM25 854 aa10.7□□□□□ -0.7
HNRNPU-222ENST00000639880 PAK3O75914 559 aaPredicted RBP10.7□□□□□ -0.7
HNRNPU-222ENST00000639880 HECW1Q76N89 1606 aa10.7□□□□□ -0.7
HNRNPU-222ENST00000639880 PTPN23Q9H3S7 1636 aa10.7□□□□□ -0.7
HNRNPU-222ENST00000639880 C9orf84Q5VXU9 1444 aa10.7□□□□□ -0.7
HNRNPU-222ENST00000639880 TPRNQ4KMQ1 711 aa10.69□□□□□ -0.7
HNRNPU-222ENST00000639880 PNNQ9H307 717 aaKnown RBP10.69□□□□□ -0.7
HNRNPU-222ENST00000639880 APBB1O00213 710 aa10.69□□□□□ -0.7
HNRNPU-222ENST00000639880 FAM161AQ3B820 660 aa10.69□□□□□ -0.7
HNRNPU-222ENST00000639880 GZF1Q9H116 711 aaPredicted RBP10.69□□□□□ -0.7
HNRNPU-222ENST00000639880 HDGFL2Q7Z4V5 671 aaPredicted RBP10.69□□□□□ -0.7
HNRNPU-222ENST00000639880 E9PSI1 815 aa10.68□□□□□ -0.7
HNRNPU-222ENST00000639880 HSCBQ8IWL3 235 aa10.68□□□□□ -0.7
HNRNPU-222ENST00000639880 MSH5O43196 834 aa10.68□□□□□ -0.7
HNRNPU-222ENST00000639880 MFAP1P55081 439 aaKnown RBP10.68□□□□□ -0.7
HNRNPU-222ENST00000639880 PMFBP1Q8TBY8 1022 aa10.68□□□□□ -0.7
HNRNPU-222ENST00000639880 ABCC5O15440 1437 aa10.68□□□□□ -0.7
HNRNPU-222ENST00000639880 IPO8O15397 1037 aaKnown RBP10.67□□□□□ -0.7
HNRNPU-222ENST00000639880 SNAPC4Q5SXM2 1469 aa10.67□□□□□ -0.7
HNRNPU-222ENST00000639880 CFAP70Q5T0N1 1121 aa10.66□□□□□ -0.7
HNRNPU-222ENST00000639880 URB2Q14146 1524 aaKnown RBP10.66□□□□□ -0.7
HNRNPU-222ENST00000639880 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.66□□□□□ -0.7
HNRNPU-222ENST00000639880 ROCK1Q13464 1354 aa10.66□□□□□ -0.7
HNRNPU-222ENST00000639880 CUL7Q14999 1698 aa10.66□□□□□ -0.7
HNRNPU-222ENST00000639880 MRC2Q9UBG0 1479 aa10.66□□□□□ -0.7
HNRNPU-222ENST00000639880 IQGAP2Q13576 1575 aa10.65□□□□□ -0.7
HNRNPU-222ENST00000639880 ELL2O00472 640 aaPredicted RBP10.65□□□□□ -0.7
HNRNPU-222ENST00000639880 CHMP4BQ9H444 224 aaKnown RBP10.65□□□□□ -0.7
HNRNPU-222ENST00000639880 PPP2R1AP30153 589 aa10.65□□□□□ -0.7
HNRNPU-222ENST00000639880 CASC1Q6TDU7 716 aa10.65□□□□□ -0.7
HNRNPU-222ENST00000639880 SMG6Q86US8 1419 aaKnown RBP10.65□□□□□ -0.7
HNRNPU-222ENST00000639880 TMEM132EQ6IEE7 984 aa10.65□□□□□ -0.71
HNRNPU-222ENST00000639880 TERF2IPQ9NYB0 399 aa10.65□□□□□ -0.71
HNRNPU-222ENST00000639880 NCOA1Q15788 1441 aa10.64□□□□□ -0.71
HNRNPU-222ENST00000639880 PLB1Q6P1J6 1458 aa10.64□□□□□ -0.71
HNRNPU-222ENST00000639880 KIAA0586Q9BVV6 1533 aa10.63□□□□□ -0.71
HNRNPU-222ENST00000639880 PANK1Q8TE04 598 aa10.63□□□□□ -0.71
HNRNPU-222ENST00000639880 CGNL1Q0VF96 1302 aa10.63□□□□□ -0.71
HNRNPU-222ENST00000639880 IFT140Q96RY7 1462 aa10.63□□□□□ -0.71
HNRNPU-222ENST00000639880 ARHGAP5Q13017 1502 aa10.63□□□□□ -0.71
HNRNPU-222ENST00000639880 USP35Q9P2H5 1018 aa10.63□□□□□ -0.71
HNRNPU-222ENST00000639880 SYNJ2O15056 1496 aa10.62□□□□□ -0.71
HNRNPU-222ENST00000639880 RPRD2Q5VT52 1461 aaKnown RBP10.62□□□□□ -0.71
HNRNPU-222ENST00000639880 SKAP1Q86WV1 359 aa10.62□□□□□ -0.71
HNRNPU-222ENST00000639880 MINK1Q8N4C8 1332 aaPredicted RBP10.62□□□□□ -0.71
HNRNPU-222ENST00000639880 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
HNRNPU-222ENST00000639880 LMOD2Q6P5Q4 547 aa10.62□□□□□ -0.71
HNRNPU-222ENST00000639880 NAP1L5Q96NT1 182 aaPredicted RBP10.61□□□□□ -0.71
HNRNPU-222ENST00000639880 ARHGEF11O15085 1522 aa10.61□□□□□ -0.71
HNRNPU-222ENST00000639880 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.61□□□□□ -0.71
HNRNPU-222ENST00000639880 FOXD4L1Q9NU39 408 aa10.6□□□□□ -0.71
HNRNPU-222ENST00000639880 CAMSAP2Q08AD1 1489 aa10.6□□□□□ -0.71
HNRNPU-222ENST00000639880 VGFO15240 615 aaPredicted RBP10.6□□□□□ -0.71
HNRNPU-222ENST00000639880 BCAR3O75815 825 aa10.6□□□□□ -0.71
HNRNPU-222ENST00000639880 ZKSCAN2Q63HK3 967 aa10.6□□□□□ -0.71
HNRNPU-222ENST00000639880 EVC2Q86UK5 1308 aa10.6□□□□□ -0.71
HNRNPU-222ENST00000639880 GSE1Q14687 1217 aa10.6□□□□□ -0.71
HNRNPU-222ENST00000639880 LAMC3Q9Y6N6 1575 aa10.6□□□□□ -0.71
HNRNPU-222ENST00000639880 THOC2Q8NI27 1593 aaKnown RBP10.6□□□□□ -0.71
HNRNPU-222ENST00000639880 MTHFSP49914 203 aa10.59□□□□□ -0.71
HNRNPU-222ENST00000639880 L1TD1Q5T7N2 865 aaKnown RBP10.59□□□□□ -0.71
HNRNPU-222ENST00000639880 BACH2Q9BYV9 841 aa10.59□□□□□ -0.71
HNRNPU-222ENST00000639880 TCP11L2Q8N4U5 519 aa10.58□□□□□ -0.72
HNRNPU-222ENST00000639880 RUNDC1Q96C34 613 aa10.58□□□□□ -0.72
HNRNPU-222ENST00000639880 ZNF608Q9ULD9 1512 aaPredicted RBP10.58□□□□□ -0.72
HNRNPU-222ENST00000639880 SLC12A5Q9H2X9 1139 aa10.58□□□□□ -0.72
HNRNPU-222ENST00000639880 GGNBP2Q9H3C7 697 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms