RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 PTPRKQ15262 1439 aa7.31□□□□□ -1.24
POLR2B-213ENST00000639658 CENPQQ7L2Z9 268 aaPredicted RBP7.31□□□□□ -1.24
POLR2B-213ENST00000639658 SAMD9Q5K651 1589 aa7.31□□□□□ -1.24
POLR2B-213ENST00000639658 CANXP27824 592 aaKnown RBP7.3□□□□□ -1.24
POLR2B-213ENST00000639658 NCOA3Q9Y6Q9 1424 aa7.3□□□□□ -1.24
POLR2B-213ENST00000639658 EIF3AQ14152 1382 aaKnown RBP7.3□□□□□ -1.24
POLR2B-213ENST00000639658 CNGB1Q14028 1251 aaPredicted RBP7.3□□□□□ -1.24
POLR2B-213ENST00000639658 BBXQ8WY36 941 aaPredicted RBP7.3□□□□□ -1.24
POLR2B-213ENST00000639658 USP19O94966 1318 aa7.3□□□□□ -1.24
POLR2B-213ENST00000639658 TAF3Q5VWG9 929 aa7.3□□□□□ -1.24
POLR2B-213ENST00000639658 FTSJ3Q8IY81 847 aaKnown RBP7.3□□□□□ -1.24
POLR2B-213ENST00000639658 KIF7Q2M1P5 1343 aa7.29□□□□□ -1.24
POLR2B-213ENST00000639658 ARHGEF12Q9NZN5 1544 aa7.29□□□□□ -1.24
POLR2B-213ENST00000639658 ESPNB1AK53 854 aa7.29□□□□□ -1.24
POLR2B-213ENST00000639658 DMTNQ08495 405 aa7.29□□□□□ -1.24
POLR2B-213ENST00000639658 OFD1O75665 1012 aa7.29□□□□□ -1.24
POLR2B-213ENST00000639658 KIF20AO95235 890 aa7.29□□□□□ -1.24
POLR2B-213ENST00000639658 ZNF608Q9ULD9 1512 aaPredicted RBP7.29□□□□□ -1.24
POLR2B-213ENST00000639658 CC2D2AQ9P2K1 1620 aa7.29□□□□□ -1.24
POLR2B-213ENST00000639658 SLC20A2Q08357 652 aa7.29□□□□□ -1.24
POLR2B-213ENST00000639658 PPP1R9BQ96SB3 815 aa7.29□□□□□ -1.24
POLR2B-213ENST00000639658 UHRF1BP1LA0JNW5 1464 aa7.29□□□□□ -1.24
POLR2B-213ENST00000639658 GOLGA6L3A6NEY3 463 aa7.28□□□□□ -1.24
POLR2B-213ENST00000639658 EPRSP07814 1512 aaKnown RBP7.28□□□□□ -1.24
POLR2B-213ENST00000639658 RALGAPBQ86X10 1494 aa7.28□□□□□ -1.24
POLR2B-213ENST00000639658 ATAD2BQ9ULI0 1458 aa7.28□□□□□ -1.24
POLR2B-213ENST00000639658 EXOC6Q8TAG9 804 aa7.27□□□□□ -1.24
POLR2B-213ENST00000639658 CAMSAP2Q08AD1 1489 aa7.27□□□□□ -1.25
POLR2B-213ENST00000639658 ROCK1Q13464 1354 aa7.27□□□□□ -1.25
POLR2B-213ENST00000639658 GTPBP4Q9BZE4 634 aaKnown RBP7.27□□□□□ -1.25
POLR2B-213ENST00000639658 RCAN3Q9UKA8 241 aa7.27□□□□□ -1.25
POLR2B-213ENST00000639658 CUL7Q14999 1698 aa7.27□□□□□ -1.25
POLR2B-213ENST00000639658 HMGXB3Q12766 1538 aa7.27□□□□□ -1.25
POLR2B-213ENST00000639658 KIF15Q9NS87 1388 aa7.27□□□□□ -1.25
POLR2B-213ENST00000639658 POLA1P09884 1462 aaPredicted RBP7.27□□□□□ -1.25
POLR2B-213ENST00000639658 ANKRD30BQ9BXX2 1392 aa7.26□□□□□ -1.25
POLR2B-213ENST00000639658 PTMSP20962 102 aa7.26□□□□□ -1.25
POLR2B-213ENST00000639658 ARID3AQ99856 593 aa7.26□□□□□ -1.25
POLR2B-213ENST00000639658 POGKQ9P215 609 aa7.26□□□□□ -1.25
POLR2B-213ENST00000639658 ABCC2Q92887 1545 aa7.26□□□□□ -1.25
POLR2B-213ENST00000639658 PARD3Q8TEW0 1356 aa7.26□□□□□ -1.25
POLR2B-213ENST00000639658 NINLQ9Y2I6 1382 aa7.26□□□□□ -1.25
POLR2B-213ENST00000639658 RIPK4P57078 832 aa7.26□□□□□ -1.25
POLR2B-213ENST00000639658 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.26□□□□□ -1.25
POLR2B-213ENST00000639658 BICRAQ9NZM4 1560 aa7.25□□□□□ -1.25
POLR2B-213ENST00000639658 RGS3P49796 1198 aa7.25□□□□□ -1.25
POLR2B-213ENST00000639658 ZNF500O60304 480 aaPredicted RBP7.25□□□□□ -1.25
POLR2B-213ENST00000639658 MMP14P50281 582 aa7.25□□□□□ -1.25
POLR2B-213ENST00000639658 RALBP1Q15311 655 aa7.25□□□□□ -1.25
POLR2B-213ENST00000639658 FAM9BQ8IZU0 186 aa7.25□□□□□ -1.25
POLR2B-213ENST00000639658 ANP32BQ92688 251 aaKnown RBP7.25□□□□□ -1.25
POLR2B-213ENST00000639658 GRIN2BQ13224 1484 aa7.25□□□□□ -1.25
POLR2B-213ENST00000639658 DYNC1I1O14576 645 aa7.24□□□□□ -1.25
POLR2B-213ENST00000639658 CNKSR2Q8WXI2 1034 aa7.24□□□□□ -1.25
POLR2B-213ENST00000639658 TMEM51Q9NW97 253 aa7.24□□□□□ -1.25
POLR2B-213ENST00000639658 ERBB4Q15303 1308 aa7.24□□□□□ -1.25
POLR2B-213ENST00000639658 FHOD3Q2V2M9 1422 aa7.24□□□□□ -1.25
POLR2B-213ENST00000639658 BECN1Q14457 450 aa7.24□□□□□ -1.25
POLR2B-213ENST00000639658 CEP170Q5SW79 1584 aa7.24□□□□□ -1.25
POLR2B-213ENST00000639658 KDM6BO15054 1643 aa7.24□□□□□ -1.25
POLR2B-213ENST00000639658 MCM5P33992 734 aa7.24□□□□□ -1.25
POLR2B-213ENST00000639658 DDIT3P35638 169 aa7.24□□□□□ -1.25
POLR2B-213ENST00000639658 MYBBP1AQ9BQG0 1328 aaKnown RBP7.24□□□□□ -1.25
POLR2B-213ENST00000639658 RTEL1-TNFRSF6BF6WH68 1400 aa7.24□□□□□ -1.25
POLR2B-213ENST00000639658 NPM2Q86SE8 214 aaKnown RBP7.23□□□□□ -1.25
POLR2B-213ENST00000639658 LETM1O95202 739 aaPredicted RBP7.23□□□□□ -1.25
POLR2B-213ENST00000639658 CLEC17AQ6ZS10 378 aa7.23□□□□□ -1.25
POLR2B-213ENST00000639658 HIRIP3Q9BW71 556 aaPredicted RBP7.22□□□□□ -1.25
POLR2B-213ENST00000639658 DNMT1P26358 1616 aaKnown RBP7.22□□□□□ -1.25
POLR2B-213ENST00000639658 ADGBQ8N7X0 1667 aa7.22□□□□□ -1.25
POLR2B-213ENST00000639658 HSP90B1P14625 803 aaKnown RBP7.22□□□□□ -1.25
POLR2B-213ENST00000639658 CCDC173Q0VFZ6 552 aa7.22□□□□□ -1.25
POLR2B-213ENST00000639658 GRPEL1Q9HAV7 217 aa7.22□□□□□ -1.25
POLR2B-213ENST00000639658 FBXO3Q9UK99 471 aa7.22□□□□□ -1.25
POLR2B-213ENST00000639658 MTUS2Q5JR59 1369 aa7.22□□□□□ -1.25
POLR2B-213ENST00000639658 ZSCAN20P17040 1043 aaPredicted RBP7.22□□□□□ -1.25
POLR2B-213ENST00000639658 MCM4P33991 863 aa7.22□□□□□ -1.25
POLR2B-213ENST00000639658 RNF216Q9NWF9 866 aaPredicted RBP7.22□□□□□ -1.25
POLR2B-213ENST00000639658 KDM5DQ9BY66 1539 aa7.22□□□□□ -1.25
POLR2B-213ENST00000639658 IGF1RP08069 1367 aa7.21□□□□□ -1.25
POLR2B-213ENST00000639658 ZSCAN30Q86W11 494 aa7.21□□□□□ -1.26
POLR2B-213ENST00000639658 CHMP4AQ9BY43 222 aa7.21□□□□□ -1.26
POLR2B-213ENST00000639658 MYH16Q9H6N6 1097 aa7.21□□□□□ -1.26
POLR2B-213ENST00000639658 MAPK8IP3Q9UPT6 1336 aa7.21□□□□□ -1.26
POLR2B-213ENST00000639658 DDX11L8A8MPP1 907 aa7.21□□□□□ -1.26
POLR2B-213ENST00000639658 GTF2F1P35269 517 aaKnown RBP eCLIP7.21□□□□□ -1.26
POLR2B-213ENST00000639658 PAXIP1Q6ZW49 1069 aaPredicted RBP7.21□□□□□ -1.26
POLR2B-213ENST00000639658 CCDC94Q9BW85 323 aaPredicted RBP7.21□□□□□ -1.26
POLR2B-213ENST00000639658 CHMP4BQ9H444 224 aaKnown RBP7.2□□□□□ -1.26
POLR2B-213ENST00000639658 ITSN2Q9NZM3 1697 aa7.2□□□□□ -1.26
POLR2B-213ENST00000639658 HSP90AB1P08238 724 aaKnown RBP7.2□□□□□ -1.26
POLR2B-213ENST00000639658 KIAA1211Q6ZU35 1233 aa7.2□□□□□ -1.26
POLR2B-213ENST00000639658 ANKRD30AQ9BXX3 1397 aa7.2□□□□□ -1.26
POLR2B-213ENST00000639658 CFTRP13569 1480 aa7.2□□□□□ -1.26
POLR2B-213ENST00000639658 ZNF521Q96K83 1311 aa7.19□□□□□ -1.26
POLR2B-213ENST00000639658 SKOR2Q2VWA4 1001 aaPredicted RBP7.19□□□□□ -1.26
POLR2B-213ENST00000639658 SAMD1Q6SPF0 538 aaPredicted RBP7.19□□□□□ -1.26
POLR2B-213ENST00000639658 ZNF692Q9BU19 519 aaPredicted RBP7.19□□□□□ -1.26
POLR2B-213ENST00000639658 REREQ9P2R6 1566 aa7.19□□□□□ -1.26
POLR2B-213ENST00000639658 CROCC2H7BZ55 1655 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms