RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 C9orf84Q5VXU9 1444 aa11.04□□□□□ -0.64
HNRNPU-219ENST00000639628 EXOC6Q8TAG9 804 aa11.04□□□□□ -0.64
HNRNPU-219ENST00000639628 SRPK2P78362 688 aaKnown RBP11.03□□□□□ -0.64
HNRNPU-219ENST00000639628 SNAPC4Q5SXM2 1469 aa11.03□□□□□ -0.64
HNRNPU-219ENST00000639628 ANKRD30BQ9BXX2 1392 aa11.03□□□□□ -0.64
HNRNPU-219ENST00000639628 AKNAQ7Z591 1439 aa11.03□□□□□ -0.64
HNRNPU-219ENST00000639628 ARXQ96QS3 562 aa11.01□□□□□ -0.65
HNRNPU-219ENST00000639628 CFAP43Q8NDM7 1665 aa11.01□□□□□ -0.65
HNRNPU-219ENST00000639628 CCDC146Q8IYE0 955 aa11.01□□□□□ -0.65
HNRNPU-219ENST00000639628 ABCC5O15440 1437 aa11□□□□□ -0.65
HNRNPU-219ENST00000639628 U2AF1L5P0DN76 240 aaPredicted RBP11□□□□□ -0.65
HNRNPU-219ENST00000639628 PDE4AP27815 886 aa11□□□□□ -0.65
HNRNPU-219ENST00000639628 U2AF1Q01081 240 aaKnown RBP eCLIP11□□□□□ -0.652e-8■■■□□ 17.8
HNRNPU-219ENST00000639628 WASHC2CQ9Y4E1 1318 aa11□□□□□ -0.65
HNRNPU-219ENST00000639628 CENPQQ7L2Z9 268 aaPredicted RBP11□□□□□ -0.65
HNRNPU-219ENST00000639628 CENPJQ9HC77 1338 aaPredicted RBP10.99□□□□□ -0.65
HNRNPU-219ENST00000639628 GOLGA6L22H0YM25 854 aa10.99□□□□□ -0.65
HNRNPU-219ENST00000639628 CCDC184Q52MB2 194 aa10.99□□□□□ -0.65
HNRNPU-219ENST00000639628 NGEFQ8N5V2 710 aa10.99□□□□□ -0.65
HNRNPU-219ENST00000639628 SAFB2Q14151 953 aaKnown RBP eCLIP10.99□□□□□ -0.65
HNRNPU-219ENST00000639628 PMFBP1Q8TBY8 1022 aa10.99□□□□□ -0.65
HNRNPU-219ENST00000639628 RWDD1Q9H446 243 aaPredicted RBP10.99□□□□□ -0.65
HNRNPU-219ENST00000639628 PLIN1O60240 522 aa10.98□□□□□ -0.65
HNRNPU-219ENST00000639628 RPRD2Q5VT52 1461 aaKnown RBP10.98□□□□□ -0.65
HNRNPU-219ENST00000639628 PTPRKQ15262 1439 aa10.98□□□□□ -0.65
HNRNPU-219ENST00000639628 HDGFL2Q7Z4V5 671 aaPredicted RBP10.98□□□□□ -0.65
HNRNPU-219ENST00000639628 PNISRQ8TF01 805 aaKnown RBP10.98□□□□□ -0.65
HNRNPU-219ENST00000639628 SMG6Q86US8 1419 aaKnown RBP10.98□□□□□ -0.65
HNRNPU-219ENST00000639628 CRBNQ96SW2 442 aa10.98□□□□□ -0.65
HNRNPU-219ENST00000639628 CTTNBP2Q8WZ74 1663 aa10.98□□□□□ -0.65
HNRNPU-219ENST00000639628 ARHGAP5Q13017 1502 aa10.98□□□□□ -0.65
HNRNPU-219ENST00000639628 E9PSI1 815 aa10.97□□□□□ -0.65
HNRNPU-219ENST00000639628 NCOA1Q15788 1441 aa10.97□□□□□ -0.65
HNRNPU-219ENST00000639628 UGGT2Q9NYU1 1516 aa10.97□□□□□ -0.65
HNRNPU-219ENST00000639628 IPO8O15397 1037 aaKnown RBP10.97□□□□□ -0.65
HNRNPU-219ENST00000639628 CAMSAP2Q08AD1 1489 aa10.97□□□□□ -0.65
HNRNPU-219ENST00000639628 STK26Q9P289 416 aa10.96□□□□□ -0.65
HNRNPU-219ENST00000639628 PLPPR3Q6T4P5 718 aa10.96□□□□□ -0.65
HNRNPU-219ENST00000639628 CASC1Q6TDU7 716 aa10.96□□□□□ -0.66
HNRNPU-219ENST00000639628 USP35Q9P2H5 1018 aa10.96□□□□□ -0.66
HNRNPU-219ENST00000639628 PLEKHH2Q8IVE3 1493 aa10.96□□□□□ -0.66
HNRNPU-219ENST00000639628 C11orf95C9JLR9 678 aaPredicted RBP10.96□□□□□ -0.66
HNRNPU-219ENST00000639628 TRAK1Q9UPV9 953 aa10.95□□□□□ -0.66
HNRNPU-219ENST00000639628 FAM161AQ3B820 660 aa10.94□□□□□ -0.66
HNRNPU-219ENST00000639628 TERF2IPQ9NYB0 399 aa10.94□□□□□ -0.66
HNRNPU-219ENST00000639628 GRIN2AQ12879 1464 aa10.94□□□□□ -0.66
HNRNPU-219ENST00000639628 CGNL1Q0VF96 1302 aa10.94□□□□□ -0.66
HNRNPU-219ENST00000639628 APAF1O14727 1248 aa10.94□□□□□ -0.66
HNRNPU-219ENST00000639628 HDGFP51858 240 aaKnown RBP10.94□□□□□ -0.66
HNRNPU-219ENST00000639628 HAP1P54257 671 aaPredicted RBP10.94□□□□□ -0.66
HNRNPU-219ENST00000639628 CALD1Q05682 793 aaKnown RBP10.94□□□□□ -0.66
HNRNPU-219ENST00000639628 HSCBQ8IWL3 235 aa10.94□□□□□ -0.66
HNRNPU-219ENST00000639628 NBPF1Q3BBV0 1214 aa10.93□□□□□ -0.66
HNRNPU-219ENST00000639628 TRIM44Q96DX7 344 aaPredicted RBP10.93□□□□□ -0.66
HNRNPU-219ENST00000639628 MAGI1Q96QZ7 1491 aaPredicted RBP10.92□□□□□ -0.66
HNRNPU-219ENST00000639628 TCOF1Q13428 1488 aaKnown RBP10.92□□□□□ -0.66
HNRNPU-219ENST00000639628 PLB1Q6P1J6 1458 aa10.92□□□□□ -0.66
HNRNPU-219ENST00000639628 HSP90AB1P08238 724 aaKnown RBP10.92□□□□□ -0.66
HNRNPU-219ENST00000639628 ITPRIPQ8IWB1 547 aa10.92□□□□□ -0.66
HNRNPU-219ENST00000639628 SMC4Q9NTJ3 1288 aa10.92□□□□□ -0.66
HNRNPU-219ENST00000639628 VGFO15240 615 aaPredicted RBP10.91□□□□□ -0.66
HNRNPU-219ENST00000639628 CFAP44Q96MT7 982 aa10.91□□□□□ -0.66
HNRNPU-219ENST00000639628 EVC2Q86UK5 1308 aa10.91□□□□□ -0.66
HNRNPU-219ENST00000639628 ADAMTS8Q9UP79 889 aa10.9□□□□□ -0.66
HNRNPU-219ENST00000639628 CCDC141Q6ZP82 1450 aa10.9□□□□□ -0.66
HNRNPU-219ENST00000639628 L1TD1Q5T7N2 865 aaKnown RBP10.9□□□□□ -0.66
HNRNPU-219ENST00000639628 CLUAP1Q96AJ1 413 aa10.9□□□□□ -0.67
HNRNPU-219ENST00000639628 CDCA7LQ96GN5 454 aa10.89□□□□□ -0.67
HNRNPU-219ENST00000639628 ARHGEF11O15085 1522 aa10.89□□□□□ -0.67
HNRNPU-219ENST00000639628 RTN4Q9NQC3 1192 aaKnown RBP10.89□□□□□ -0.67
HNRNPU-219ENST00000639628 KIF14Q15058 1648 aa10.89□□□□□ -0.67
HNRNPU-219ENST00000639628 DNAJC5BQ9UF47 199 aa10.89□□□□□ -0.67
HNRNPU-219ENST00000639628 RRP7AQ9Y3A4 280 aaKnown RBP10.89□□□□□ -0.67
HNRNPU-219ENST00000639628 PPP2R1AP30153 589 aa10.88□□□□□ -0.67
HNRNPU-219ENST00000639628 C14orf37Q86TY3 774 aa10.88□□□□□ -0.67
HNRNPU-219ENST00000639628 ERBINQ96RT1 1412 aa10.88□□□□□ -0.67
HNRNPU-219ENST00000639628 NCLP19338 710 aaKnown RBP10.87□□□□□ -0.67
HNRNPU-219ENST00000639628 NUTM2DQ5VT03 806 aaPredicted RBP10.87□□□□□ -0.67
HNRNPU-219ENST00000639628 AFAP1Q8N556 730 aa10.87□□□□□ -0.67
HNRNPU-219ENST00000639628 SLKQ9H2G2 1235 aaPredicted RBP10.87□□□□□ -0.67
HNRNPU-219ENST00000639628 GLIPR1L2Q4G1C9 344 aa10.87□□□□□ -0.67
HNRNPU-219ENST00000639628 COG6Q9Y2V7 657 aa10.87□□□□□ -0.67
HNRNPU-219ENST00000639628 ZNF608Q9ULD9 1512 aaPredicted RBP10.86□□□□□ -0.67
HNRNPU-219ENST00000639628 RUNDC1Q96C34 613 aa10.86□□□□□ -0.67
HNRNPU-219ENST00000639628 GPATCH8Q9UKJ3 1502 aaKnown RBP10.86□□□□□ -0.67
HNRNPU-219ENST00000639628 ZKSCAN2Q63HK3 967 aa10.86□□□□□ -0.67
HNRNPU-219ENST00000639628 RAPGEF6Q8TEU7 1601 aa10.86□□□□□ -0.67
HNRNPU-219ENST00000639628 MLECQ14165 292 aa10.85□□□□□ -0.67
HNRNPU-219ENST00000639628 AAMPQ13685 434 aa10.85□□□□□ -0.67
HNRNPU-219ENST00000639628 SCAPERQ9BY12 1400 aa10.85□□□□□ -0.67
HNRNPU-219ENST00000639628 SPRYD3Q8NCJ5 442 aa10.85□□□□□ -0.67
HNRNPU-219ENST00000639628 NUP153P49790 1475 aaKnown RBP10.84□□□□□ -0.67
HNRNPU-219ENST00000639628 LMOD3Q0VAK6 560 aa10.84□□□□□ -0.67
HNRNPU-219ENST00000639628 CFAP70Q5T0N1 1121 aa10.84□□□□□ -0.67
HNRNPU-219ENST00000639628 BCL2L13Q9BXK5 485 aa10.84□□□□□ -0.67
HNRNPU-219ENST00000639628 MFAP1P55081 439 aaKnown RBP10.83□□□□□ -0.68
HNRNPU-219ENST00000639628 WDR62O43379 1518 aa10.83□□□□□ -0.68
HNRNPU-219ENST00000639628 ZBTB7CA1YPR0 619 aa10.83□□□□□ -0.68
HNRNPU-219ENST00000639628 ITSN2Q9NZM3 1697 aa10.82□□□□□ -0.68
HNRNPU-219ENST00000639628 KIF21AQ7Z4S6 1674 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms