RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 ANP32BQ92688 251 aaKnown RBP17.45■□□□□ 0.38
SCARB2-215ENST00000639145 TAOK2Q9UL54 1235 aa17.45■□□□□ 0.38
SCARB2-215ENST00000639145 PLB1Q6P1J6 1458 aa17.45■□□□□ 0.38
SCARB2-215ENST00000639145 COG3Q96JB2 828 aa17.45■□□□□ 0.38
SCARB2-215ENST00000639145 GOLGA2Q08379 1002 aa17.43■□□□□ 0.38
SCARB2-215ENST00000639145 CALD1Q05682 793 aaKnown RBP17.43■□□□□ 0.38
SCARB2-215ENST00000639145 CASC1Q6TDU7 716 aa17.43■□□□□ 0.38
SCARB2-215ENST00000639145 CFAP70Q5T0N1 1121 aa17.42■□□□□ 0.38
SCARB2-215ENST00000639145 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.42■□□□□ 0.38
SCARB2-215ENST00000639145 CLUAP1Q96AJ1 413 aa17.42■□□□□ 0.38
SCARB2-215ENST00000639145 RCAN3Q9UKA8 241 aa17.42■□□□□ 0.38
SCARB2-215ENST00000639145 LAMC3Q9Y6N6 1575 aa17.41■□□□□ 0.38
SCARB2-215ENST00000639145 TROQ12816 1431 aaPredicted RBP17.41■□□□□ 0.38
SCARB2-215ENST00000639145 IPO8O15397 1037 aaKnown RBP17.41■□□□□ 0.38
SCARB2-215ENST00000639145 PSME1Q06323 249 aa17.41■□□□□ 0.38
SCARB2-215ENST00000639145 TXNDC2Q86VQ3 553 aa17.41■□□□□ 0.38
SCARB2-215ENST00000639145 CGNL1Q0VF96 1302 aa17.4■□□□□ 0.38
SCARB2-215ENST00000639145 CENPJQ9HC77 1338 aaPredicted RBP17.4■□□□□ 0.38
SCARB2-215ENST00000639145 KIAA0586Q9BVV6 1533 aa17.4■□□□□ 0.38
SCARB2-215ENST00000639145 ELL2O00472 640 aaPredicted RBP17.4■□□□□ 0.38
SCARB2-215ENST00000639145 BECN1Q14457 450 aa17.4■□□□□ 0.38
SCARB2-215ENST00000639145 STK31Q9BXU1 1019 aa17.4■□□□□ 0.38
SCARB2-215ENST00000639145 KCNJ4P48050 445 aa17.39■□□□□ 0.37
SCARB2-215ENST00000639145 TPRNQ4KMQ1 711 aa17.38■□□□□ 0.37
SCARB2-215ENST00000639145 ITPRIPQ8IWB1 547 aa17.38■□□□□ 0.37
SCARB2-215ENST00000639145 SMC4Q9NTJ3 1288 aa17.38■□□□□ 0.37
SCARB2-215ENST00000639145 EVA1CP58658 441 aa17.37■□□□□ 0.37
SCARB2-215ENST00000639145 NBPF1Q3BBV0 1214 aa17.37■□□□□ 0.37
SCARB2-215ENST00000639145 PRKRIP1Q9H875 184 aaPredicted RBP17.36■□□□□ 0.37
SCARB2-215ENST00000639145 NUTM2GQ5VZR2 741 aa17.36■□□□□ 0.37
SCARB2-215ENST00000639145 SLC4A10Q6U841 1118 aa17.36■□□□□ 0.37
SCARB2-215ENST00000639145 NBPF8Q3BBV2 869 aa17.36■□□□□ 0.37
SCARB2-215ENST00000639145 CABP2Q9NPB3 220 aa17.35■□□□□ 0.37
SCARB2-215ENST00000639145 FGD1P98174 961 aa17.35■□□□□ 0.37
SCARB2-215ENST00000639145 ATF3P18847 181 aa17.34■□□□□ 0.37
SCARB2-215ENST00000639145 MYBBP1AQ9BQG0 1328 aaKnown RBP17.34■□□□□ 0.37
SCARB2-215ENST00000639145 C9orf84Q5VXU9 1444 aa17.34■□□□□ 0.37
SCARB2-215ENST00000639145 RRBP1Q9P2E9 1410 aaKnown RBP17.33■□□□□ 0.36
SCARB2-215ENST00000639145 EFCAB5A4FU69 1503 aa17.33■□□□□ 0.36
SCARB2-215ENST00000639145 GGNBP2Q9H3C7 697 aa17.32■□□□□ 0.36
SCARB2-215ENST00000639145 NAP1L2Q9ULW6 460 aaPredicted RBP17.32■□□□□ 0.36
SCARB2-215ENST00000639145 BCL2L13Q9BXK5 485 aa17.31■□□□□ 0.36
SCARB2-215ENST00000639145 CHMP3Q9Y3E7 222 aa17.31■□□□□ 0.36
SCARB2-215ENST00000639145 SLC26A8Q96RN1 970 aa17.31■□□□□ 0.36
SCARB2-215ENST00000639145 LMOD3Q0VAK6 560 aa17.31■□□□□ 0.36
SCARB2-215ENST00000639145 DDRGK1Q96HY6 314 aa17.3■□□□□ 0.36
SCARB2-215ENST00000639145 APAF1O14727 1248 aa17.29■□□□□ 0.36
SCARB2-215ENST00000639145 TIAM1Q13009 1591 aa17.29■□□□□ 0.36
SCARB2-215ENST00000639145 ARHGEF11O15085 1522 aa17.29■□□□□ 0.36
SCARB2-215ENST00000639145 STAC3Q96MF2 364 aa17.29■□□□□ 0.36
SCARB2-215ENST00000639145 PCF11O94913 1555 aaKnown RBP17.29■□□□□ 0.36
SCARB2-215ENST00000639145 EPRSP07814 1512 aaKnown RBP17.29■□□□□ 0.36
SCARB2-215ENST00000639145 PROSER2Q86WR7 435 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-215ENST00000639145 TEFQ10587 303 aa17.28■□□□□ 0.36
SCARB2-215ENST00000639145 THEMISQ8N1K5 641 aaPredicted RBP17.27■□□□□ 0.36
SCARB2-215ENST00000639145 CHMP4AQ9BY43 222 aa17.27■□□□□ 0.36
SCARB2-215ENST00000639145 GRIN2AQ12879 1464 aa17.27■□□□□ 0.36
SCARB2-215ENST00000639145 NCLP19338 710 aaKnown RBP17.27■□□□□ 0.36
SCARB2-215ENST00000639145 NLRP6P59044 892 aa17.27■□□□□ 0.36
SCARB2-215ENST00000639145 KIF7Q2M1P5 1343 aa17.27■□□□□ 0.35
SCARB2-215ENST00000639145 C1orf141Q5JVX7 400 aa17.27■□□□□ 0.35
SCARB2-215ENST00000639145 DIAPH1O60610 1272 aaKnown RBP17.26■□□□□ 0.35
SCARB2-215ENST00000639145 PMFBP1Q8TBY8 1022 aa17.26■□□□□ 0.35
SCARB2-215ENST00000639145 PRAM1Q96QH2 718 aa17.26■□□□□ 0.35
SCARB2-215ENST00000639145 MIA2Q96PC5 1412 aa17.25■□□□□ 0.35
SCARB2-215ENST00000639145 GTF2E1P29083 439 aaPredicted RBP17.25■□□□□ 0.35
SCARB2-215ENST00000639145 SYTL4Q96C24 671 aaPredicted RBP17.25■□□□□ 0.35
SCARB2-215ENST00000639145 IQGAP2Q13576 1575 aa17.24■□□□□ 0.35
SCARB2-215ENST00000639145 SLC52A1Q9NWF4 448 aa17.24■□□□□ 0.35
SCARB2-215ENST00000639145 WASHC2AQ641Q2 1341 aa17.24■□□□□ 0.35
SCARB2-215ENST00000639145 TCERG1O14776 1098 aaKnown RBP17.24■□□□□ 0.35
SCARB2-215ENST00000639145 NGEFQ8N5V2 710 aa17.24■□□□□ 0.35
SCARB2-215ENST00000639145 CD109Q6YHK3 1445 aa17.23■□□□□ 0.35
SCARB2-215ENST00000639145 HMOX1P09601 288 aa17.23■□□□□ 0.35
SCARB2-215ENST00000639145 ESCO1Q5FWF5 840 aa17.23■□□□□ 0.35
SCARB2-215ENST00000639145 TAF7LQ5H9L4 462 aa17.23■□□□□ 0.35
SCARB2-215ENST00000639145 GOLGA6L22H0YM25 854 aa17.23■□□□□ 0.35
SCARB2-215ENST00000639145 PLEKHH2Q8IVE3 1493 aa17.22■□□□□ 0.35
SCARB2-215ENST00000639145 EHBP1L1Q8N3D4 1523 aa17.22■□□□□ 0.35
SCARB2-215ENST00000639145 RWDD1Q9H446 243 aaPredicted RBP17.22■□□□□ 0.35
SCARB2-215ENST00000639145 MAGI1Q96QZ7 1491 aaPredicted RBP17.22■□□□□ 0.35
SCARB2-215ENST00000639145 PDE3BQ13370 1112 aa17.21■□□□□ 0.35
SCARB2-215ENST00000639145 NLRP2Q9NX02 1062 aa17.21■□□□□ 0.35
SCARB2-215ENST00000639145 EIF5BO60841 1220 aaKnown RBP17.21■□□□□ 0.34
SCARB2-215ENST00000639145 EIF2S2P20042 333 aaKnown RBP17.21■□□□□ 0.34
SCARB2-215ENST00000639145 GORABQ5T7V8 394 aa17.21■□□□□ 0.34
SCARB2-215ENST00000639145 NECTIN2Q92692 538 aa17.21■□□□□ 0.34
SCARB2-215ENST00000639145 USP35Q9P2H5 1018 aa17.21■□□□□ 0.34
SCARB2-215ENST00000639145 SLC12A5Q9H2X9 1139 aa17.19■□□□□ 0.34
SCARB2-215ENST00000639145 CCDC7Q96M83 1385 aa17.19■□□□□ 0.34
SCARB2-215ENST00000639145 TULP1O00294 542 aaPredicted RBP17.19■□□□□ 0.34
SCARB2-215ENST00000639145 ISY1Q9ULR0 285 aaKnown RBP17.19■□□□□ 0.34
SCARB2-215ENST00000639145 HECW1Q76N89 1606 aa17.19■□□□□ 0.34
SCARB2-215ENST00000639145 NAIPQ13075 1403 aa17.18■□□□□ 0.34
SCARB2-215ENST00000639145 PLIN1O60240 522 aa17.18■□□□□ 0.34
SCARB2-215ENST00000639145 HSP90AB1P08238 724 aaKnown RBP17.18■□□□□ 0.34
SCARB2-215ENST00000639145 RIPK4P57078 832 aa17.18■□□□□ 0.34
SCARB2-215ENST00000639145 ABTB2Q8N961 1025 aa17.18■□□□□ 0.34
SCARB2-215ENST00000639145 CCDC184Q52MB2 194 aa17.18■□□□□ 0.34
SCARB2-215ENST00000639145 MEX3CQ5U5Q3 659 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms