RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 PTGDRQ13258 359 aa4.12□□□□□ -1.75
HMHB1-202ENST00000638299 CALR3Q96L12 384 aaKnown RBP4.12□□□□□ -1.75
HMHB1-202ENST00000638299 BEGAINQ9BUH8 593 aa4.12□□□□□ -1.75
HMHB1-202ENST00000638299 TRPC6Q9Y210 931 aa4.12□□□□□ -1.75
HMHB1-202ENST00000638299 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.11□□□□□ -1.75
HMHB1-202ENST00000638299 RFC5P40937 340 aa4.11□□□□□ -1.75
HMHB1-202ENST00000638299 MAP3K9P80192 1104 aa4.11□□□□□ -1.75
HMHB1-202ENST00000638299 MYSM1Q5VVJ2 828 aa4.11□□□□□ -1.75
HMHB1-202ENST00000638299 DPY19L2Q6NUT2 758 aa4.11□□□□□ -1.75
HMHB1-202ENST00000638299 PLPP6Q8IY26 295 aa4.11□□□□□ -1.75
HMHB1-202ENST00000638299 GLMNQ92990 594 aa4.11□□□□□ -1.75
HMHB1-202ENST00000638299 IVNS1ABPQ9Y6Y0 642 aa4.11□□□□□ -1.75
HMHB1-202ENST00000638299 TBC1D12O60347 775 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 BRD1O95696 1058 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 ABL2P42684 1182 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 FOXK1P85037 733 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 KCNA1Q09470 495 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 FAM161AQ3B820 660 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 MTMR14Q8NCE2 650 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 UPF1Q92900 1129 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMHB1-202ENST00000638299 CDHR5Q9HBB8 845 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 GPCPD1Q9NPB8 672 aa4.1□□□□□ -1.75
HMHB1-202ENST00000638299 CDK11BP21127 795 aaKnown RBP4.09□□□□□ -1.75
HMHB1-202ENST00000638299 CLCN1P35523 988 aa4.09□□□□□ -1.75
HMHB1-202ENST00000638299 SRPK2P78362 688 aaKnown RBP4.09□□□□□ -1.75
HMHB1-202ENST00000638299 CCDC27Q2M243 656 aa4.09□□□□□ -1.75
HMHB1-202ENST00000638299 BANK1Q8NDB2 785 aa4.09□□□□□ -1.75
HMHB1-202ENST00000638299 PUS7Q96PZ0 661 aaKnown RBP4.09□□□□□ -1.75
HMHB1-202ENST00000638299 TMEM106CQ9BVX2 250 aa4.09□□□□□ -1.75
HMHB1-202ENST00000638299 CDK11AQ9UQ88 783 aaPredicted RBP4.09□□□□□ -1.75
HMHB1-202ENST00000638299 HSP90B1P14625 803 aaKnown RBP4.08□□□□□ -1.76
HMHB1-202ENST00000638299 CLK2P49760 499 aaKnown RBP4.08□□□□□ -1.76
HMHB1-202ENST00000638299 GOLGA2Q08379 1002 aa4.08□□□□□ -1.76
HMHB1-202ENST00000638299 CFAP70Q5T0N1 1121 aa4.08□□□□□ -1.76
HMHB1-202ENST00000638299 ADAMTS19Q8TE59 1207 aa4.08□□□□□ -1.76
HMHB1-202ENST00000638299 PBXIP1Q96AQ6 731 aa4.08□□□□□ -1.76
HMHB1-202ENST00000638299 NPDC1Q9NQX5 325 aaPredicted RBP4.08□□□□□ -1.76
HMHB1-202ENST00000638299 FAM217BQ9NTX9 383 aaPredicted RBP4.08□□□□□ -1.76
HMHB1-202ENST00000638299 LIMD1Q9UGP4 676 aa4.08□□□□□ -1.76
HMHB1-202ENST00000638299 TBC1D2BQ9UPU7 963 aa4.08□□□□□ -1.76
HMHB1-202ENST00000638299 AMOTL2Q9Y2J4 779 aa4.08□□□□□ -1.76
HMHB1-202ENST00000638299 C2orf72A6NCS6 295 aa4.07□□□□□ -1.76
HMHB1-202ENST00000638299 PTGER2P43116 358 aa4.07□□□□□ -1.76
HMHB1-202ENST00000638299 HDGFL1Q5TGJ6 251 aa4.07□□□□□ -1.76
HMHB1-202ENST00000638299 PELP1Q8IZL8 1130 aaKnown RBP4.07□□□□□ -1.76
HMHB1-202ENST00000638299 TMC2Q8TDI7 906 aa4.07□□□□□ -1.76
HMHB1-202ENST00000638299 RBM42Q9BTD8 480 aaKnown RBP4.07□□□□□ -1.76
HMHB1-202ENST00000638299 TBC1D2Q9BYX2 928 aa4.07□□□□□ -1.76
HMHB1-202ENST00000638299 PATL2C9JE40 543 aaKnown RBP4.06□□□□□ -1.76
HMHB1-202ENST00000638299 PDE4CQ08493 712 aa4.06□□□□□ -1.76
HMHB1-202ENST00000638299 CDCA8Q53HL2 280 aa4.06□□□□□ -1.76
HMHB1-202ENST00000638299 SND1Q7KZF4 910 aaKnown RBP eCLIP4.06□□□□□ -1.76
HMHB1-202ENST00000638299 ILDR1Q86SU0 546 aaPredicted RBP4.06□□□□□ -1.76
HMHB1-202ENST00000638299 MICALL2Q8IY33 904 aa4.06□□□□□ -1.76
HMHB1-202ENST00000638299 FAM177A1Q8N128 213 aaPredicted RBP4.06□□□□□ -1.76
HMHB1-202ENST00000638299 PHF12Q96QT6 1004 aa4.06□□□□□ -1.76
HMHB1-202ENST00000638299 IGSF5Q9NSI5 407 aa4.06□□□□□ -1.76
HMHB1-202ENST00000638299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.06□□□□□ -1.76
HMHB1-202ENST00000638299 KIF3CO14782 793 aa4.05□□□□□ -1.76
HMHB1-202ENST00000638299 HMGB1P09429 215 aaKnown RBP4.05□□□□□ -1.76
HMHB1-202ENST00000638299 CSB-PGBD3P0DP91 1061 aa4.05□□□□□ -1.76
HMHB1-202ENST00000638299 PRKAR2AP13861 404 aaKnown RBP4.05□□□□□ -1.76
HMHB1-202ENST00000638299 MYT1LQ9UL68 1186 aa4.05□□□□□ -1.76
HMHB1-202ENST00000638299 USTQ9Y2C2 406 aa4.05□□□□□ -1.76
HMHB1-202ENST00000638299 EIF5BO60841 1220 aaKnown RBP4.04□□□□□ -1.76
HMHB1-202ENST00000638299 TMEM259Q4ZIN3 620 aa4.04□□□□□ -1.76
HMHB1-202ENST00000638299 PPP2R2DQ66LE6 453 aa4.04□□□□□ -1.76
HMHB1-202ENST00000638299 CHMP4AQ9BY43 222 aa4.04□□□□□ -1.76
HMHB1-202ENST00000638299 VRTNQ9H8Y1 702 aa4.04□□□□□ -1.76
HMHB1-202ENST00000638299 KIAA1522Q9P206 1035 aaPredicted RBP4.04□□□□□ -1.76
HMHB1-202ENST00000638299 TMEM88BA6NKF7 163 aa4.03□□□□□ -1.76
HMHB1-202ENST00000638299 EVI5O60447 810 aa4.03□□□□□ -1.76
HMHB1-202ENST00000638299 PAK3O75914 559 aaPredicted RBP4.03□□□□□ -1.76
HMHB1-202ENST00000638299 CSPP1Q1MSJ5 1256 aa4.03□□□□□ -1.76
HMHB1-202ENST00000638299 RSPH4AQ5TD94 716 aa4.03□□□□□ -1.76
HMHB1-202ENST00000638299 RIC3Q7Z5B4 369 aa4.03□□□□□ -1.76
HMHB1-202ENST00000638299 AP1G2O75843 785 aa4.02□□□□□ -1.77
HMHB1-202ENST00000638299 LMOD1P29536 600 aaPredicted RBP4.02□□□□□ -1.77
HMHB1-202ENST00000638299 QPCTQ16769 361 aa4.02□□□□□ -1.77
HMHB1-202ENST00000638299 TSR1Q2NL82 804 aaKnown RBP4.02□□□□□ -1.77
HMHB1-202ENST00000638299 RTL5Q5HYW3 569 aaPredicted RBP4.02□□□□□ -1.77
HMHB1-202ENST00000638299 METTL3Q86U44 580 aaKnown RBP4.02□□□□□ -1.77
HMHB1-202ENST00000638299 WWC1Q8IX03 1113 aa4.02□□□□□ -1.77
HMHB1-202ENST00000638299 RBM33Q96EV2 1170 aaKnown RBP4.02□□□□□ -1.77
HMHB1-202ENST00000638299 PPP1R12CQ9BZL4 782 aa4.02□□□□□ -1.77
HMHB1-202ENST00000638299 ZRANB1Q9UGI0 708 aa4.02□□□□□ -1.77
HMHB1-202ENST00000638299 RBM47A0AV96 593 aaKnown RBP4.01□□□□□ -1.77
HMHB1-202ENST00000638299 PALM3A6NDB9 673 aaPredicted RBP4.01□□□□□ -1.77
HMHB1-202ENST00000638299 VAC14Q08AM6 782 aa4.01□□□□□ -1.77
HMHB1-202ENST00000638299 NOM1Q5C9Z4 860 aaKnown RBP4.01□□□□□ -1.77
HMHB1-202ENST00000638299 ZNF710Q8N1W2 664 aa4.01□□□□□ -1.77
HMHB1-202ENST00000638299 SPIRE2Q8WWL2 714 aa4.01□□□□□ -1.77
HMHB1-202ENST00000638299 MRRFQ96E11 262 aaKnown RBP4.01□□□□□ -1.77
HMHB1-202ENST00000638299 MS4A3Q96HJ5 214 aa4.01□□□□□ -1.77
HMHB1-202ENST00000638299 GJD4Q96KN9 370 aaPredicted RBP4.01□□□□□ -1.77
HMHB1-202ENST00000638299 GPR37L1O60883 481 aa4□□□□□ -1.77
HMHB1-202ENST00000638299 NDUFV2P19404 249 aa4□□□□□ -1.77
HMHB1-202ENST00000638299 EN1Q05925 392 aaPredicted RBP4□□□□□ -1.77
HMHB1-202ENST00000638299 TMEM92Q6UXU6 159 aa4□□□□□ -1.77
HMHB1-202ENST00000638299 TXNDC2Q86VQ3 553 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms