RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 RABGEF1Q9UJ41 708 aa10.21□□□□□ -0.77
CHD2-219ENST00000630016 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.19□□□□□ -0.78
CHD2-219ENST00000630016 COL9A1P20849 921 aa10.18□□□□□ -0.78
CHD2-219ENST00000630016 PROX2Q3B8N5 592 aa10.18□□□□□ -0.78
CHD2-219ENST00000630016 AMER1Q5JTC6 1135 aaPredicted RBP10.18□□□□□ -0.78
CHD2-219ENST00000630016 SPRYD3Q8NCJ5 442 aa10.18□□□□□ -0.78
CHD2-219ENST00000630016 ANKK1Q8NFD2 765 aa10.16□□□□□ -0.78
CHD2-219ENST00000630016 C6orf132Q5T0Z8 1188 aa10.14□□□□□ -0.79
CHD2-219ENST00000630016 LAPTM4BQ86VI4 370 aa10.14□□□□□ -0.79
CHD2-219ENST00000630016 IFFO2Q5TF58 517 aa10.13□□□□□ -0.79
CHD2-219ENST00000630016 DDX12PQ92771 950 aa10.13□□□□□ -0.79
CHD2-219ENST00000630016 ONECUT3O60422 494 aaPredicted RBP10.12□□□□□ -0.79
CHD2-219ENST00000630016 RBM33Q96EV2 1170 aaKnown RBP10.12□□□□□ -0.79
CHD2-219ENST00000630016 PDIA6Q15084 440 aa10.11□□□□□ -0.79
CHD2-219ENST00000630016 KIAA1468Q9P260 1216 aa10.11□□□□□ -0.79
CHD2-219ENST00000630016 NBR1Q14596 966 aa10.1□□□□□ -0.79
CHD2-219ENST00000630016 SPDYE16A6NNV3 312 aaPredicted RBP10.09□□□□□ -0.79
CHD2-219ENST00000630016 TRIM6-TRIM34B2RNG4 842 aa10.09□□□□□ -0.79
CHD2-219ENST00000630016 MAP3K7O43318 606 aa10.08□□□□□ -0.8
CHD2-219ENST00000630016 BCAMP50895 628 aa10.08□□□□□ -0.8
CHD2-219ENST00000630016 EN1Q05925 392 aaPredicted RBP10.08□□□□□ -0.8
CHD2-219ENST00000630016 ZFRQ96KR1 1074 aaKnown RBP10.08□□□□□ -0.8
CHD2-219ENST00000630016 CFAP44Q96MT7 982 aa10.08□□□□□ -0.8
CHD2-219ENST00000630016 SOWAHBA6NEL2 793 aa10.07□□□□□ -0.8
CHD2-219ENST00000630016 E2F4Q16254 413 aa10.07□□□□□ -0.8
CHD2-219ENST00000630016 WDR70Q9NW82 654 aa10.07□□□□□ -0.8
CHD2-219ENST00000630016 SEPT9Q9UHD8 586 aaPredicted RBP10.07□□□□□ -0.8
CHD2-219ENST00000630016 A0A0G2JS52 829 aa10.06□□□□□ -0.8
CHD2-219ENST00000630016 RGS20O76081 388 aa10.06□□□□□ -0.8
CHD2-219ENST00000630016 NYAP1Q6ZVC0 841 aa10.06□□□□□ -0.8
CHD2-219ENST00000630016 PAXIP1Q6ZW49 1069 aaPredicted RBP10.06□□□□□ -0.8
CHD2-219ENST00000630016 FAM98CQ17RN3 349 aaKnown RBP10.05□□□□□ -0.8
CHD2-219ENST00000630016 RTN4Q9NQC3 1192 aaKnown RBP10.05□□□□□ -0.8
CHD2-219ENST00000630016 TSR1Q2NL82 804 aaKnown RBP10.03□□□□□ -0.8
CHD2-219ENST00000630016 ITGBL1O95965 494 aaPredicted RBP10.02□□□□□ -0.81
CHD2-219ENST00000630016 PACS2Q86VP3 889 aa10.02□□□□□ -0.81
CHD2-219ENST00000630016 LRCH3Q96II8 777 aa10.01□□□□□ -0.81
CHD2-219ENST00000630016 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.01□□□□□ -0.81
CHD2-219ENST00000630016 ARIH1Q9Y4X5 557 aaPredicted RBP10.01□□□□□ -0.81
CHD2-219ENST00000630016 CERKQ8TCT0 537 aa10□□□□□ -0.81
CHD2-219ENST00000630016 WBP1LQ9NX94 342 aa9.99□□□□□ -0.81
CHD2-219ENST00000630016 TSKSQ9UJT2 592 aa9.99□□□□□ -0.81
CHD2-219ENST00000630016 GRXCR2A6NFK2 248 aa9.98□□□□□ -0.81
CHD2-219ENST00000630016 TSR3Q9UJK0 312 aaKnown RBP9.98□□□□□ -0.81
CHD2-219ENST00000630016 HPS5Q9UPZ3 1129 aa9.98□□□□□ -0.81
CHD2-219ENST00000630016 CDCA7LQ96GN5 454 aa9.96□□□□□ -0.82
CHD2-219ENST00000630016 PRSS12P56730 875 aa9.95□□□□□ -0.82
CHD2-219ENST00000630016 NBPF26B4DH59 902 aa9.94□□□□□ -0.82
CHD2-219ENST00000630016 KCNC4Q03721 635 aa9.94□□□□□ -0.82
CHD2-219ENST00000630016 IRX2Q9BZI1 471 aaPredicted RBP9.93□□□□□ -0.82
CHD2-219ENST00000630016 PRIM1P49642 420 aaKnown RBP9.91□□□□□ -0.82
CHD2-219ENST00000630016 PPP4CP60510 307 aa9.91□□□□□ -0.82
CHD2-219ENST00000630016 RBM27Q9P2N5 1060 aaKnown RBP9.91□□□□□ -0.82
CHD2-219ENST00000630016 SMAPO00193 183 aa9.9□□□□□ -0.82
CHD2-219ENST00000630016 CDHR5Q9HBB8 845 aa9.9□□□□□ -0.82
CHD2-219ENST00000630016 PNMA3Q9UL41 463 aa9.9□□□□□ -0.82
CHD2-219ENST00000630016 OSBPP22059 807 aa9.89□□□□□ -0.83
CHD2-219ENST00000630016 SAMD7Q7Z3H4 446 aa9.89□□□□□ -0.83
CHD2-219ENST00000630016 TATDN2Q93075 761 aa9.89□□□□□ -0.83
CHD2-219ENST00000630016 FAM198AQ9UFP1 575 aa9.88□□□□□ -0.83
CHD2-219ENST00000630016 HDGFP51858 240 aaKnown RBP9.86□□□□□ -0.83
CHD2-219ENST00000630016 RNF40O75150 1001 aa9.85□□□□□ -0.83
CHD2-219ENST00000630016 NUDT18Q6ZVK8 323 aa9.85□□□□□ -0.83
CHD2-219ENST00000630016 C3orf80F5H4A9 247 aa9.82□□□□□ -0.84
CHD2-219ENST00000630016 NECTIN2Q92692 538 aa9.82□□□□□ -0.84
CHD2-219ENST00000630016 PADI6Q6TGC4 694 aa9.81□□□□□ -0.84
CHD2-219ENST00000630016 ARHGEF1Q92888 912 aaKnown RBP9.81□□□□□ -0.84
CHD2-219ENST00000630016 SLC4A3P48751 1232 aa9.79□□□□□ -0.84
CHD2-219ENST00000630016 TJAP1Q5JTD0 557 aa9.79□□□□□ -0.84
CHD2-219ENST00000630016 MTRQ99707 1265 aa9.79□□□□□ -0.84
CHD2-219ENST00000630016 IL21Q9HBE4 155 aa9.79□□□□□ -0.84
CHD2-219ENST00000630016 SLF2Q8IX21 1173 aa9.78□□□□□ -0.84
CHD2-219ENST00000630016 TTC13Q8NBP0 860 aa9.78□□□□□ -0.84
CHD2-219ENST00000630016 NPDC1Q9NQX5 325 aaPredicted RBP9.77□□□□□ -0.85
CHD2-219ENST00000630016 TSHZ2Q9NRE2 1034 aa9.77□□□□□ -0.85
CHD2-219ENST00000630016 KCNV2Q8TDN2 545 aa9.76□□□□□ -0.85
CHD2-219ENST00000630016 SWT1Q5T5J6 900 aaKnown RBP9.75□□□□□ -0.85
CHD2-219ENST00000630016 MLLT3P42568 568 aaPredicted RBP9.74□□□□□ -0.85
CHD2-219ENST00000630016 APLP1P51693 650 aa9.74□□□□□ -0.85
CHD2-219ENST00000630016 Q6ZNB5 142 aa9.73□□□□□ -0.85
CHD2-219ENST00000630016 P3H3Q8IVL6 736 aa9.73□□□□□ -0.85
CHD2-219ENST00000630016 LAPTM4AQ15012 233 aa9.71□□□□□ -0.86
CHD2-219ENST00000630016 PRR14Q9BWN1 585 aa9.71□□□□□ -0.86
CHD2-219ENST00000630016 PPP1R18Q6NYC8 613 aa9.7□□□□□ -0.86
CHD2-219ENST00000630016 EYA1Q99502 592 aa9.7□□□□□ -0.86
CHD2-219ENST00000630016 PTGDRQ13258 359 aa9.69□□□□□ -0.86
CHD2-219ENST00000630016 ZNF516Q92618 1163 aa9.69□□□□□ -0.86
CHD2-219ENST00000630016 DNAJB2P25686 324 aa9.68□□□□□ -0.86
CHD2-219ENST00000630016 PRKD2Q9BZL6 878 aa9.68□□□□□ -0.86
CHD2-219ENST00000630016 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.68□□□□□ -0.86
CHD2-219ENST00000630016 GGCXP38435 758 aa9.67□□□□□ -0.86
CHD2-219ENST00000630016 COPS2P61201 443 aa9.67□□□□□ -0.86
CHD2-219ENST00000630016 RBM46Q8TBY0 533 aaKnown RBP9.67□□□□□ -0.86
CHD2-219ENST00000630016 NUTM2FA1L443 756 aa9.66□□□□□ -0.86
CHD2-219ENST00000630016 V9GY48 417 aaPredicted RBP9.66□□□□□ -0.86
CHD2-219ENST00000630016 PCDHB3Q9Y5E6 796 aa9.65□□□□□ -0.86
CHD2-219ENST00000630016 GFRA3O60609 400 aa9.63□□□□□ -0.87
CHD2-219ENST00000630016 ZPR1O75312 459 aa9.63□□□□□ -0.87
CHD2-219ENST00000630016 NKX2-3Q8TAU0 364 aa9.63□□□□□ -0.87
CHD2-219ENST00000630016 TMEM134Q9H6X4 195 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms