RNA–Protein interactions for RNA: ENST00000629918.1

TTC38-207, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 5 BASIC

Gene TTC38, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-207ENST00000629918 ATP7AQ04656 1500 aa17.2■□□□□ 0.34
TTC38-207ENST00000629918 SPAG9O60271 1321 aaKnown RBP17.2■□□□□ 0.34
TTC38-207ENST00000629918 INO80Q9ULG1 1556 aaPredicted RBP17.19■□□□□ 0.34
TTC38-207ENST00000629918 PZPP20742 1482 aa17.18■□□□□ 0.34
TTC38-207ENST00000629918 CLIP1P30622 1438 aa17.18■□□□□ 0.34
TTC38-207ENST00000629918 UGGT1Q9NYU2 1555 aa17.18■□□□□ 0.34
TTC38-207ENST00000629918 NLRP1Q9C000 1473 aa17.17■□□□□ 0.34
TTC38-207ENST00000629918 CDC42BPAQ5VT25 1732 aa17.16■□□□□ 0.34
TTC38-207ENST00000629918 MIA2Q96PC5 1412 aa17.16■□□□□ 0.34
TTC38-207ENST00000629918 ROBO1Q9Y6N7 1651 aa17.16■□□□□ 0.34
TTC38-207ENST00000629918 LRRIQ1Q96JM4 1722 aa17.16■□□□□ 0.34
TTC38-207ENST00000629918 SYCP2Q9BX26 1530 aa17.15■□□□□ 0.34
TTC38-207ENST00000629918 FAM135AQ9P2D6 1515 aa17.15■□□□□ 0.34
TTC38-207ENST00000629918 TRIM52Q96A61 297 aa17.14■□□□□ 0.33
TTC38-207ENST00000629918 CDK12Q9NYV4 1490 aaPredicted RBP17.13■□□□□ 0.33
TTC38-207ENST00000629918 LRP6O75581 1613 aa17.12■□□□□ 0.33
TTC38-207ENST00000629918 KDM5DQ9BY66 1539 aa17.11■□□□□ 0.33
TTC38-207ENST00000629918 HNRNPMP52272 730 aaKnown RBP eCLIP17.11■□□□□ 0.33
TTC38-207ENST00000629918 JCADQ9P266 1359 aa17.11■□□□□ 0.33
TTC38-207ENST00000629918 FMN1Q68DA7 1419 aa17.11■□□□□ 0.33
TTC38-207ENST00000629918 KIAA1107Q9UPP5 1409 aa17.1■□□□□ 0.33
TTC38-207ENST00000629918 ZNF772Q68DY9 489 aaPredicted RBP17.09■□□□□ 0.33
TTC38-207ENST00000629918 ATP1B4Q9UN42 357 aaPredicted RBP17.09■□□□□ 0.33
TTC38-207ENST00000629918 ADGBQ8N7X0 1667 aa17.09■□□□□ 0.33
TTC38-207ENST00000629918 MAP3K1Q13233 1512 aa17.06■□□□□ 0.32
TTC38-207ENST00000629918 RXRBP28702 533 aa17.05■□□□□ 0.32
TTC38-207ENST00000629918 GPATCH8Q9UKJ3 1502 aaKnown RBP17.05■□□□□ 0.32
TTC38-207ENST00000629918 TMEM94Q12767 1356 aa17.04■□□□□ 0.32
TTC38-207ENST00000629918 PHLPP1O60346 1717 aa17.04■□□□□ 0.32
TTC38-207ENST00000629918 COL16A1Q07092 1604 aaPredicted RBP17.03■□□□□ 0.32
TTC38-207ENST00000629918 SETBP1Q9Y6X0 1596 aa17.03■□□□□ 0.32
TTC38-207ENST00000629918 LRRC9Q6ZRR7 1453 aa17.03■□□□□ 0.32
TTC38-207ENST00000629918 DHX29Q7Z478 1369 aaKnown RBP17.02■□□□□ 0.32
TTC38-207ENST00000629918 SCAF11Q99590 1463 aaKnown RBP17.02■□□□□ 0.32
TTC38-207ENST00000629918 ARHGAP35Q9NRY4 1499 aa17.02■□□□□ 0.32
TTC38-207ENST00000629918 ZNF777Q9ULD5 760 aaPredicted RBP17.02■□□□□ 0.32
TTC38-207ENST00000629918 SPATA31A6Q5VVP1 1343 aa17.01■□□□□ 0.31
TTC38-207ENST00000629918 ARHGAP23Q9P227 1491 aa17.01■□□□□ 0.31
TTC38-207ENST00000629918 LTKP29376 864 aa17.01■□□□□ 0.31
TTC38-207ENST00000629918 NCOA2Q15596 1464 aa16.99■□□□□ 0.31
TTC38-207ENST00000629918 FGD6Q6ZV73 1430 aa16.99■□□□□ 0.31
TTC38-207ENST00000629918 PLEKHH2Q8IVE3 1493 aa16.99■□□□□ 0.31
TTC38-207ENST00000629918 RGS12O14924 1447 aa16.97■□□□□ 0.31
TTC38-207ENST00000629918 SLIT1O75093 1534 aa16.97■□□□□ 0.31
TTC38-207ENST00000629918 UBR1Q8IWV7 1749 aa16.97■□□□□ 0.31
TTC38-207ENST00000629918 RTEL1-TNFRSF6BF6WH68 1400 aa16.96■□□□□ 0.31
TTC38-207ENST00000629918 WASHC2CQ9Y4E1 1318 aa16.96■□□□□ 0.3
TTC38-207ENST00000629918 KIF3BO15066 747 aa16.95■□□□□ 0.3
TTC38-207ENST00000629918 MBD5Q9P267 1494 aa16.94■□□□□ 0.3
TTC38-207ENST00000629918 SLAIN2Q9P270 581 aa16.94■□□□□ 0.3
TTC38-207ENST00000629918 ZRANB1Q9UGI0 708 aa16.94■□□□□ 0.3
TTC38-207ENST00000629918 KCNA6P17658 529 aa16.93■□□□□ 0.3
TTC38-207ENST00000629918 SHPRHQ149N8 1683 aa16.93■□□□□ 0.3
TTC38-207ENST00000629918 PRDM15P57071 1507 aaPredicted RBP16.92■□□□□ 0.3
TTC38-207ENST00000629918 TXNDC2Q86VQ3 553 aa16.92■□□□□ 0.3
TTC38-207ENST00000629918 ERVK-7P63135 1459 aa16.92■□□□□ 0.3
TTC38-207ENST00000629918 EEA1Q15075 1411 aa16.91■□□□□ 0.3
TTC38-207ENST00000629918 MEX3CQ5U5Q3 659 aaKnown RBP16.91■□□□□ 0.3
TTC38-207ENST00000629918 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
TTC38-207ENST00000629918 TIAM1Q13009 1591 aa16.9■□□□□ 0.3
TTC38-207ENST00000629918 CCDC18Q5T9S5 1454 aa16.9■□□□□ 0.3
TTC38-207ENST00000629918 PROSER2Q86WR7 435 aaPredicted RBP16.88■□□□□ 0.29
TTC38-207ENST00000629918 CFDP1Q9UEE9 299 aaPredicted RBP16.88■□□□□ 0.29
TTC38-207ENST00000629918 NWD1Q149M9 1564 aa16.87■□□□□ 0.29
TTC38-207ENST00000629918 AFF2P51816 1311 aa16.87■□□□□ 0.29
TTC38-207ENST00000629918 TET3O43151 1660 aa16.87■□□□□ 0.29
TTC38-207ENST00000629918 CASKIN1Q8WXD9 1431 aa16.87■□□□□ 0.29
TTC38-207ENST00000629918 DIP2AQ14689 1571 aa16.86■□□□□ 0.29
TTC38-207ENST00000629918 AHDC1Q5TGY3 1603 aaPredicted RBP16.86■□□□□ 0.29
TTC38-207ENST00000629918 ZNF644Q9H582 1327 aaPredicted RBP16.86■□□□□ 0.29
TTC38-207ENST00000629918 NKTRP30414 1462 aaKnown RBP16.86■□□□□ 0.29
TTC38-207ENST00000629918 ABCC3O15438 1527 aa16.86■□□□□ 0.29
TTC38-207ENST00000629918 RBM6P78332 1123 aaKnown RBP16.85■□□□□ 0.29
TTC38-207ENST00000629918 MSH6P52701 1360 aa16.84■□□□□ 0.29
TTC38-207ENST00000629918 CAMSAP2Q08AD1 1489 aa16.84■□□□□ 0.29
TTC38-207ENST00000629918 ATAD2Q6PL18 1390 aa16.82■□□□□ 0.28
TTC38-207ENST00000629918 FOXD1Q16676 465 aa16.82■□□□□ 0.28
TTC38-207ENST00000629918 LRP5O75197 1615 aa16.81■□□□□ 0.28
TTC38-207ENST00000629918 NUTM2BA6NNL0 878 aaPredicted RBP16.81■□□□□ 0.28
TTC38-207ENST00000629918 NUTM2EB1AL46 878 aaPredicted RBP16.81■□□□□ 0.28
TTC38-207ENST00000629918 NUTM2DQ5VT03 806 aaPredicted RBP16.81■□□□□ 0.28
TTC38-207ENST00000629918 NUTM2AQ8IVF1 878 aaPredicted RBP16.81■□□□□ 0.28
TTC38-207ENST00000629918 KDM5AP29375 1690 aaKnown RBP16.81■□□□□ 0.28
TTC38-207ENST00000629918 TMEM2Q9UHN6 1383 aa16.8■□□□□ 0.28
TTC38-207ENST00000629918 QTRT2Q9H974 415 aaKnown RBP16.8■□□□□ 0.28
TTC38-207ENST00000629918 EID1Q9Y6B2 187 aa16.79■□□□□ 0.28
TTC38-207ENST00000629918 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.28
TTC38-207ENST00000629918 CFAP65Q6ZU64 1925 aaKnown RBP16.77■□□□□ 0.28
TTC38-207ENST00000629918 SLC26A8Q96RN1 970 aa16.77■□□□□ 0.28
TTC38-207ENST00000629918 MROH1Q8NDA8 1641 aa16.76■□□□□ 0.27
TTC38-207ENST00000629918 MAST1Q9Y2H9 1570 aa16.73■□□□□ 0.27
TTC38-207ENST00000629918 NCOA3Q9Y6Q9 1424 aa16.73■□□□□ 0.27
TTC38-207ENST00000629918 CCDC125Q86Z20 511 aa16.73■□□□□ 0.27
TTC38-207ENST00000629918 EP400Q96L91 3159 aa16.73■□□□□ 0.27
TTC38-207ENST00000629918 PIK3C2BO00750 1634 aa16.73■□□□□ 0.27
TTC38-207ENST00000629918 SETD5Q9C0A6 1442 aa16.72■□□□□ 0.27
TTC38-207ENST00000629918 CCDC141Q6ZP82 1450 aa16.71■□□□□ 0.27
TTC38-207ENST00000629918 ARHGAP31Q2M1Z3 1444 aa16.7■□□□□ 0.26
TTC38-207ENST00000629918 CHD2O14647 1828 aaKnown RBP16.7■□□□□ 0.26
TTC38-207ENST00000629918 FYCO1Q9BQS8 1478 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms