RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CCDC144AA2RUR9 1427 aa17.44■□□□□ 0.38
SYNGAP1-207ENST00000628646 CDC42BPAQ5VT25 1732 aa17.44■□□□□ 0.38
SYNGAP1-207ENST00000628646 MBD5Q9P267 1494 aa17.44■□□□□ 0.38
SYNGAP1-207ENST00000628646 YTHDC1Q96MU7 727 aaKnown RBP17.43■□□□□ 0.38
SYNGAP1-207ENST00000628646 EID1Q9Y6B2 187 aa17.43■□□□□ 0.38
SYNGAP1-207ENST00000628646 ATP7AQ04656 1500 aa17.43■□□□□ 0.38
SYNGAP1-207ENST00000628646 RTEL1-TNFRSF6BF6WH68 1400 aa17.42■□□□□ 0.38
SYNGAP1-207ENST00000628646 ABCC1P33527 1531 aa17.42■□□□□ 0.38
SYNGAP1-207ENST00000628646 FBXO31Q5XUX0 539 aaPredicted RBP17.42■□□□□ 0.38
SYNGAP1-207ENST00000628646 ATP10AO60312 1499 aa17.42■□□□□ 0.38
SYNGAP1-207ENST00000628646 ARHGEF12Q9NZN5 1544 aa17.42■□□□□ 0.38
SYNGAP1-207ENST00000628646 C14orf37Q86TY3 774 aa17.41■□□□□ 0.38
SYNGAP1-207ENST00000628646 ZFYVE16Q7Z3T8 1539 aa17.39■□□□□ 0.38
SYNGAP1-207ENST00000628646 DNMT1P26358 1616 aaKnown RBP17.39■□□□□ 0.37
SYNGAP1-207ENST00000628646 DUOX2Q9NRD8 1548 aa17.39■□□□□ 0.37
SYNGAP1-207ENST00000628646 SHANK2Q9UPX8 1470 aa17.38■□□□□ 0.37
SYNGAP1-207ENST00000628646 ARAP3Q8WWN8 1544 aa17.37■□□□□ 0.37
SYNGAP1-207ENST00000628646 GLI2P10070 1586 aa17.37■□□□□ 0.37
SYNGAP1-207ENST00000628646 CDC42BPBQ9Y5S2 1711 aa17.36■□□□□ 0.37
SYNGAP1-207ENST00000628646 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
SYNGAP1-207ENST00000628646 L3MBTL2Q969R5 705 aa17.35■□□□□ 0.37
SYNGAP1-207ENST00000628646 ERBINQ96RT1 1412 aa17.34■□□□□ 0.37
SYNGAP1-207ENST00000628646 STK26Q9P289 416 aa17.34■□□□□ 0.37
SYNGAP1-207ENST00000628646 HIRIP3Q9BW71 556 aaPredicted RBP17.34■□□□□ 0.37
SYNGAP1-207ENST00000628646 ARHGEF5Q12774 1597 aa17.33■□□□□ 0.37
SYNGAP1-207ENST00000628646 MLH3Q9UHC1 1453 aa17.33■□□□□ 0.36
SYNGAP1-207ENST00000628646 CARD11Q9BXL7 1154 aa17.33■□□□□ 0.36
SYNGAP1-207ENST00000628646 SLC52A1Q9NWF4 448 aa17.32■□□□□ 0.36
SYNGAP1-207ENST00000628646 MAGI2Q86UL8 1455 aa17.31■□□□□ 0.36
SYNGAP1-207ENST00000628646 POGKQ9P215 609 aa17.3■□□□□ 0.36
SYNGAP1-207ENST00000628646 SAFB2Q14151 953 aaKnown RBP eCLIP17.3■□□□□ 0.36
SYNGAP1-207ENST00000628646 THEMISQ8N1K5 641 aaPredicted RBP17.3■□□□□ 0.36
SYNGAP1-207ENST00000628646 VGFO15240 615 aaPredicted RBP17.29■□□□□ 0.36
SYNGAP1-207ENST00000628646 COL17A1Q9UMD9 1497 aaPredicted RBP17.29■□□□□ 0.36
SYNGAP1-207ENST00000628646 HECW2Q9P2P5 1572 aa17.29■□□□□ 0.36
SYNGAP1-207ENST00000628646 CROCC2H7BZ55 1655 aa17.29■□□□□ 0.36
SYNGAP1-207ENST00000628646 TXNDC2Q86VQ3 553 aa17.28■□□□□ 0.36
SYNGAP1-207ENST00000628646 ADGRL2O95490 1459 aa17.28■□□□□ 0.36
SYNGAP1-207ENST00000628646 IDI1Q13907 227 aa17.27■□□□□ 0.36
SYNGAP1-207ENST00000628646 ZMYM3Q14202 1370 aa17.26■□□□□ 0.35
SYNGAP1-207ENST00000628646 EIF4G2P78344 907 aaKnown RBP eCLIP17.25■□□□□ 0.351e-7■■■■■ 32.2
SYNGAP1-207ENST00000628646 ADGBQ8N7X0 1667 aa17.24■□□□□ 0.35
SYNGAP1-207ENST00000628646 MAP3K4Q9Y6R4 1608 aa17.24■□□□□ 0.35
SYNGAP1-207ENST00000628646 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.23■□□□□ 0.35
SYNGAP1-207ENST00000628646 TNRQ92752 1358 aa17.22■□□□□ 0.35
SYNGAP1-207ENST00000628646 PELP1Q8IZL8 1130 aaKnown RBP17.22■□□□□ 0.35
SYNGAP1-207ENST00000628646 ANKLE2Q86XL3 938 aa17.2■□□□□ 0.34
SYNGAP1-207ENST00000628646 CFAP65Q6ZU64 1925 aaKnown RBP17.2■□□□□ 0.34
SYNGAP1-207ENST00000628646 DDX10Q13206 875 aaKnown RBP17.19■□□□□ 0.34
SYNGAP1-207ENST00000628646 CNTLNQ9NXG0 1405 aa17.18■□□□□ 0.34
SYNGAP1-207ENST00000628646 ROCK2O75116 1388 aaKnown RBP17.18■□□□□ 0.34
SYNGAP1-207ENST00000628646 TRAK1Q9UPV9 953 aa17.18■□□□□ 0.34
SYNGAP1-207ENST00000628646 FAM135AQ9P2D6 1515 aa17.18■□□□□ 0.34
SYNGAP1-207ENST00000628646 HSPA2P54652 639 aa17.18■□□□□ 0.34
SYNGAP1-207ENST00000628646 SLC26A8Q96RN1 970 aa17.18■□□□□ 0.34
SYNGAP1-207ENST00000628646 ANKRD30BQ9BXX2 1392 aa17.17■□□□□ 0.34
SYNGAP1-207ENST00000628646 PZPP20742 1482 aa17.17■□□□□ 0.34
SYNGAP1-207ENST00000628646 TMC1Q8TDI8 760 aa17.16■□□□□ 0.34
SYNGAP1-207ENST00000628646 PLEKHG5O94827 1062 aa17.16■□□□□ 0.34
SYNGAP1-207ENST00000628646 RPRD2Q5VT52 1461 aaKnown RBP17.16■□□□□ 0.34
SYNGAP1-207ENST00000628646 TMEM132EQ6IEE7 984 aa17.14■□□□□ 0.33
SYNGAP1-207ENST00000628646 KIF13AQ9H1H9 1805 aa17.14■□□□□ 0.33
SYNGAP1-207ENST00000628646 CFAP70Q5T0N1 1121 aa17.13■□□□□ 0.33
SYNGAP1-207ENST00000628646 SRPK2P78362 688 aaKnown RBP17.1■□□□□ 0.33
SYNGAP1-207ENST00000628646 NUTM2FA1L443 756 aa17.1■□□□□ 0.33
SYNGAP1-207ENST00000628646 POLR1AO95602 1720 aaPredicted RBP17.1■□□□□ 0.33
SYNGAP1-207ENST00000628646 DIP2CQ9Y2E4 1556 aa17.1■□□□□ 0.33
SYNGAP1-207ENST00000628646 MAST1Q9Y2H9 1570 aa17.09■□□□□ 0.33
SYNGAP1-207ENST00000628646 PLXNC1O60486 1568 aa17.08■□□□□ 0.33
SYNGAP1-207ENST00000628646 STAC3Q96MF2 364 aa17.08■□□□□ 0.32
SYNGAP1-207ENST00000628646 KDM5CP41229 1560 aa17.08■□□□□ 0.32
SYNGAP1-207ENST00000628646 NPATQ14207 1427 aa17.08■□□□□ 0.32
SYNGAP1-207ENST00000628646 KIDINS220Q9ULH0 1771 aa17.07■□□□□ 0.32
SYNGAP1-207ENST00000628646 RPGRIP1LQ68CZ1 1315 aa17.07■□□□□ 0.32
SYNGAP1-207ENST00000628646 ABCA6Q8N139 1617 aa17.06■□□□□ 0.32
SYNGAP1-207ENST00000628646 CCER2I3L3R5 266 aa17.06■□□□□ 0.32
SYNGAP1-207ENST00000628646 SPATA31E1Q6ZUB1 1445 aa17.06■□□□□ 0.32
SYNGAP1-207ENST00000628646 WASHC2AQ641Q2 1341 aa17.06■□□□□ 0.32
SYNGAP1-207ENST00000628646 HSPA5P11021 654 aaKnown RBP17.05■□□□□ 0.32
SYNGAP1-207ENST00000628646 ARHGEF40Q8TER5 1519 aa17.05■□□□□ 0.32
SYNGAP1-207ENST00000628646 INO80Q9ULG1 1556 aaPredicted RBP17.05■□□□□ 0.32
SYNGAP1-207ENST00000628646 LMOD2Q6P5Q4 547 aa17.05■□□□□ 0.32
SYNGAP1-207ENST00000628646 UHRF1BP1Q6BDS2 1440 aa17.05■□□□□ 0.32
SYNGAP1-207ENST00000628646 CDCA8Q53HL2 280 aa17.04■□□□□ 0.32
SYNGAP1-207ENST00000628646 SUPT16HQ9Y5B9 1047 aaKnown RBP17.04■□□□□ 0.32
SYNGAP1-207ENST00000628646 TMF1P82094 1093 aa17.04■□□□□ 0.32
SYNGAP1-207ENST00000628646 NBPF1Q3BBV0 1214 aa17.04■□□□□ 0.32
SYNGAP1-207ENST00000628646 KDM5DQ9BY66 1539 aa17.03■□□□□ 0.32
SYNGAP1-207ENST00000628646 ADGRF5Q8IZF2 1346 aa17.03■□□□□ 0.32
SYNGAP1-207ENST00000628646 MINK1Q8N4C8 1332 aaPredicted RBP17.03■□□□□ 0.32
SYNGAP1-207ENST00000628646 NBPF8Q3BBV2 869 aa17.03■□□□□ 0.32
SYNGAP1-207ENST00000628646 PROSER2Q86WR7 435 aaPredicted RBP17.02■□□□□ 0.32
SYNGAP1-207ENST00000628646 ANP32CO43423 234 aa17.02■□□□□ 0.31
SYNGAP1-207ENST00000628646 ST20-MTHFSA0A0A6YYL1 179 aa17.01■□□□□ 0.31
SYNGAP1-207ENST00000628646 ZMYM4Q5VZL5 1548 aa17.01■□□□□ 0.31
SYNGAP1-207ENST00000628646 NCKAP5LQ9HCH0 1330 aa17.01■□□□□ 0.31
SYNGAP1-207ENST00000628646 NOS1P29475 1434 aa17.01■□□□□ 0.31
SYNGAP1-207ENST00000628646 EIF3AQ14152 1382 aaKnown RBP17.01■□□□□ 0.31
SYNGAP1-207ENST00000628646 RICTORQ6R327 1708 aa17■□□□□ 0.31
SYNGAP1-207ENST00000628646 C11orf95C9JLR9 678 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms