RNA–Protein interactions for RNA: ENST00000624116.1

AC004943.3-201, humanhuman

BASIC

Gene AC004943.3, Length 600 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.3-201ENST00000624116 BHMG1C9JSJ3 638 aaPredicted RBP12.8□□□□□ -0.36
AC004943.3-201ENST00000624116 MRPL50Q8N5N7 158 aaKnown RBP12.8□□□□□ -0.36
AC004943.3-201ENST00000624116 WDR70Q9NW82 654 aa12.79□□□□□ -0.36
AC004943.3-201ENST00000624116 PLA2G2EQ9NZK7 142 aa12.77□□□□□ -0.37
AC004943.3-201ENST00000624116 SPDYE16A6NNV3 312 aaPredicted RBP12.75□□□□□ -0.37
AC004943.3-201ENST00000624116 E2F4Q16254 413 aa12.75□□□□□ -0.37
AC004943.3-201ENST00000624116 RABGEF1Q9UJ41 708 aa12.75□□□□□ -0.37
AC004943.3-201ENST00000624116 PDIA6Q15084 440 aa12.74□□□□□ -0.37
AC004943.3-201ENST00000624116 WNT2BQ93097 391 aa12.73□□□□□ -0.37
AC004943.3-201ENST00000624116 C6orf132Q5T0Z8 1188 aa12.71□□□□□ -0.37
AC004943.3-201ENST00000624116 THSD4Q6ZMP0 1018 aa12.71□□□□□ -0.37
AC004943.3-201ENST00000624116 ONECUT3O60422 494 aaPredicted RBP12.7□□□□□ -0.38
AC004943.3-201ENST00000624116 COL9A1P20849 921 aa12.7□□□□□ -0.38
AC004943.3-201ENST00000624116 PTPN5P54829 565 aa12.7□□□□□ -0.38
AC004943.3-201ENST00000624116 DDX12PQ92771 950 aa12.7□□□□□ -0.38
AC004943.3-201ENST00000624116 ARIH1Q9Y4X5 557 aaPredicted RBP12.69□□□□□ -0.38
AC004943.3-201ENST00000624116 LAPTM4BQ86VI4 370 aa12.68□□□□□ -0.38
AC004943.3-201ENST00000624116 NBR1Q14596 966 aa12.67□□□□□ -0.38
AC004943.3-201ENST00000624116 PROX2Q3B8N5 592 aa12.67□□□□□ -0.38
AC004943.3-201ENST00000624116 ANKK1Q8NFD2 765 aa12.66□□□□□ -0.38
AC004943.3-201ENST00000624116 RBM33Q96EV2 1170 aaKnown RBP12.66□□□□□ -0.38
AC004943.3-201ENST00000624116 EN1Q05925 392 aaPredicted RBP12.65□□□□□ -0.38
AC004943.3-201ENST00000624116 MAP3K7O43318 606 aa12.63□□□□□ -0.39
AC004943.3-201ENST00000624116 TRIM6-TRIM34B2RNG4 842 aa12.62□□□□□ -0.39
AC004943.3-201ENST00000624116 KIAA1468Q9P260 1216 aa12.62□□□□□ -0.39
AC004943.3-201ENST00000624116 CERKQ8TCT0 537 aa12.59□□□□□ -0.39
AC004943.3-201ENST00000624116 IFFO2Q5TF58 517 aa12.57□□□□□ -0.4
AC004943.3-201ENST00000624116 PACS2Q86VP3 889 aa12.57□□□□□ -0.4
AC004943.3-201ENST00000624116 ZFRQ96KR1 1074 aaKnown RBP12.57□□□□□ -0.4
AC004943.3-201ENST00000624116 FAM98CQ17RN3 349 aaKnown RBP12.56□□□□□ -0.4
AC004943.3-201ENST00000624116 NYAP1Q6ZVC0 841 aa12.56□□□□□ -0.4
AC004943.3-201ENST00000624116 SOWAHBA6NEL2 793 aa12.55□□□□□ -0.4
AC004943.3-201ENST00000624116 GRXCR2A6NFK2 248 aa12.55□□□□□ -0.4
AC004943.3-201ENST00000624116 TSR1Q2NL82 804 aaKnown RBP12.55□□□□□ -0.4
AC004943.3-201ENST00000624116 SEPT9Q9UHD8 586 aaPredicted RBP12.53□□□□□ -0.4
AC004943.3-201ENST00000624116 BCAMP50895 628 aa12.5□□□□□ -0.41
AC004943.3-201ENST00000624116 PRSS12P56730 875 aa12.49□□□□□ -0.41
AC004943.3-201ENST00000624116 CDCA7LQ96GN5 454 aa12.49□□□□□ -0.41
AC004943.3-201ENST00000624116 LRCH3Q96II8 777 aa12.49□□□□□ -0.41
AC004943.3-201ENST00000624116 ARHGEF1Q92888 912 aaKnown RBP12.48□□□□□ -0.41
AC004943.3-201ENST00000624116 TSKSQ9UJT2 592 aa12.48□□□□□ -0.41
AC004943.3-201ENST00000624116 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.47□□□□□ -0.41
AC004943.3-201ENST00000624116 RBM27Q9P2N5 1060 aaKnown RBP12.47□□□□□ -0.41
AC004943.3-201ENST00000624116 NBPF26B4DH59 902 aa12.46□□□□□ -0.41
AC004943.3-201ENST00000624116 RGS20O76081 388 aa12.46□□□□□ -0.41
AC004943.3-201ENST00000624116 OSBPP22059 807 aa12.46□□□□□ -0.41
AC004943.3-201ENST00000624116 TSHZ2Q9NRE2 1034 aa12.46□□□□□ -0.41
AC004943.3-201ENST00000624116 TSR3Q9UJK0 312 aaKnown RBP12.45□□□□□ -0.42
AC004943.3-201ENST00000624116 ITGBL1O95965 494 aaPredicted RBP12.44□□□□□ -0.42
AC004943.3-201ENST00000624116 PRIM1P49642 420 aaKnown RBP12.42□□□□□ -0.42
AC004943.3-201ENST00000624116 WBP1LQ9NX94 342 aa12.42□□□□□ -0.42
AC004943.3-201ENST00000624116 A0A0G2JS52 829 aa12.41□□□□□ -0.42
AC004943.3-201ENST00000624116 P3H3Q8IVL6 736 aa12.41□□□□□ -0.42
AC004943.3-201ENST00000624116 HPS5Q9UPZ3 1129 aa12.41□□□□□ -0.42
AC004943.3-201ENST00000624116 HDGFP51858 240 aaKnown RBP12.39□□□□□ -0.43
AC004943.3-201ENST00000624116 TATDN2Q93075 761 aa12.39□□□□□ -0.43
AC004943.3-201ENST00000624116 CDHR5Q9HBB8 845 aa12.39□□□□□ -0.43
AC004943.3-201ENST00000624116 KCNV2Q8TDN2 545 aa12.38□□□□□ -0.43
AC004943.3-201ENST00000624116 PNMA3Q9UL41 463 aa12.38□□□□□ -0.43
AC004943.3-201ENST00000624116 PPP4CP60510 307 aa12.36□□□□□ -0.43
AC004943.3-201ENST00000624116 SMAPO00193 183 aa12.35□□□□□ -0.43
AC004943.3-201ENST00000624116 KCNC4Q03721 635 aa12.35□□□□□ -0.43
AC004943.3-201ENST00000624116 FAM198AQ9UFP1 575 aa12.35□□□□□ -0.43
AC004943.3-201ENST00000624116 SAMD7Q7Z3H4 446 aa12.34□□□□□ -0.43
AC004943.3-201ENST00000624116 NECTIN2Q92692 538 aa12.34□□□□□ -0.43
AC004943.3-201ENST00000624116 NUDT18Q6ZVK8 323 aa12.33□□□□□ -0.44
AC004943.3-201ENST00000624116 SLC4A3P48751 1232 aa12.31□□□□□ -0.44
AC004943.3-201ENST00000624116 PADI6Q6TGC4 694 aa12.3□□□□□ -0.44
AC004943.3-201ENST00000624116 TTC13Q8NBP0 860 aa12.3□□□□□ -0.44
AC004943.3-201ENST00000624116 NPDC1Q9NQX5 325 aaPredicted RBP12.3□□□□□ -0.44
AC004943.3-201ENST00000624116 MLLT3P42568 568 aaPredicted RBP12.29□□□□□ -0.44
AC004943.3-201ENST00000624116 RNF40O75150 1001 aa12.27□□□□□ -0.45
AC004943.3-201ENST00000624116 PLCB2Q00722 1185 aa12.27□□□□□ -0.45
AC004943.3-201ENST00000624116 C3orf80F5H4A9 247 aa12.25□□□□□ -0.45
AC004943.3-201ENST00000624116 SLF2Q8IX21 1173 aa12.25□□□□□ -0.45
AC004943.3-201ENST00000624116 PTGDRQ13258 359 aa12.23□□□□□ -0.45
AC004943.3-201ENST00000624116 IRX2Q9BZI1 471 aaPredicted RBP12.2□□□□□ -0.46
AC004943.3-201ENST00000624116 IL21Q9HBE4 155 aa12.2□□□□□ -0.46
AC004943.3-201ENST00000624116 NUTM2FA1L443 756 aa12.19□□□□□ -0.46
AC004943.3-201ENST00000624116 SWT1Q5T5J6 900 aaKnown RBP12.19□□□□□ -0.46
AC004943.3-201ENST00000624116 EYA1Q99502 592 aa12.19□□□□□ -0.46
AC004943.3-201ENST00000624116 PRR14Q9BWN1 585 aa12.19□□□□□ -0.46
AC004943.3-201ENST00000624116 TJAP1Q5JTD0 557 aa12.18□□□□□ -0.46
AC004943.3-201ENST00000624116 RBM46Q8TBY0 533 aaKnown RBP12.18□□□□□ -0.46
AC004943.3-201ENST00000624116 MTRQ99707 1265 aa12.18□□□□□ -0.46
AC004943.3-201ENST00000624116 SMYD5Q6GMV2 418 aa12.17□□□□□ -0.46
AC004943.3-201ENST00000624116 FCHSD2O94868 740 aa12.16□□□□□ -0.46
AC004943.3-201ENST00000624116 DNAJB2P25686 324 aa12.16□□□□□ -0.46
AC004943.3-201ENST00000624116 SEMA3EO15041 775 aa12.15□□□□□ -0.46
AC004943.3-201ENST00000624116 APLP1P51693 650 aa12.14□□□□□ -0.47
AC004943.3-201ENST00000624116 ADGRG1Q9Y653 693 aa12.12□□□□□ -0.47
AC004943.3-201ENST00000624116 TMEM134Q9H6X4 195 aa12.09□□□□□ -0.47
AC004943.3-201ENST00000624116 TESPA1A2RU30 521 aaPredicted RBP12.08□□□□□ -0.48
AC004943.3-201ENST00000624116 HIC1Q14526 733 aa12.08□□□□□ -0.48
AC004943.3-201ENST00000624116 GGCXP38435 758 aa12.07□□□□□ -0.48
AC004943.3-201ENST00000624116 HAP1P54257 671 aaPredicted RBP12.07□□□□□ -0.48
AC004943.3-201ENST00000624116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.06□□□□□ -0.48
AC004943.3-201ENST00000624116 OATP04181 439 aa12.06□□□□□ -0.48
AC004943.3-201ENST00000624116 RCCD1A6NED2 376 aa12.05□□□□□ -0.48
AC004943.3-201ENST00000624116 PCDHB3Q9Y5E6 796 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms