RNA–Protein interactions for RNA: ENST00000624116.1

AC004943.3-201, humanhuman

BASIC

Gene AC004943.3, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.3-201ENST00000624116 BHMG1C9JSJ3 638 aaPredicted RBP12.8□□□□□ -0.36
AC004943.3-201ENST00000624116 MRPL50Q8N5N7 158 aaKnown RBP12.8□□□□□ -0.36
AC004943.3-201ENST00000624116 WDR70Q9NW82 654 aa12.79□□□□□ -0.36
AC004943.3-201ENST00000624116 PLA2G2EQ9NZK7 142 aa12.77□□□□□ -0.37
AC004943.3-201ENST00000624116 SPDYE16A6NNV3 312 aaPredicted RBP12.75□□□□□ -0.37
AC004943.3-201ENST00000624116 E2F4Q16254 413 aa12.75□□□□□ -0.37
AC004943.3-201ENST00000624116 RABGEF1Q9UJ41 708 aa12.75□□□□□ -0.37
AC004943.3-201ENST00000624116 PDIA6Q15084 440 aa12.74□□□□□ -0.37
AC004943.3-201ENST00000624116 WNT2BQ93097 391 aa12.73□□□□□ -0.37
AC004943.3-201ENST00000624116 C6orf132Q5T0Z8 1188 aa12.71□□□□□ -0.37
AC004943.3-201ENST00000624116 THSD4Q6ZMP0 1018 aa12.71□□□□□ -0.37
AC004943.3-201ENST00000624116 ONECUT3O60422 494 aaPredicted RBP12.7□□□□□ -0.38
AC004943.3-201ENST00000624116 COL9A1P20849 921 aa12.7□□□□□ -0.38
AC004943.3-201ENST00000624116 PTPN5P54829 565 aa12.7□□□□□ -0.38
AC004943.3-201ENST00000624116 DDX12PQ92771 950 aa12.7□□□□□ -0.38
AC004943.3-201ENST00000624116 ARIH1Q9Y4X5 557 aaPredicted RBP12.69□□□□□ -0.38
AC004943.3-201ENST00000624116 LAPTM4BQ86VI4 370 aa12.68□□□□□ -0.38
AC004943.3-201ENST00000624116 NBR1Q14596 966 aa12.67□□□□□ -0.38
AC004943.3-201ENST00000624116 PROX2Q3B8N5 592 aa12.67□□□□□ -0.38
AC004943.3-201ENST00000624116 ANKK1Q8NFD2 765 aa12.66□□□□□ -0.38
AC004943.3-201ENST00000624116 RBM33Q96EV2 1170 aaKnown RBP12.66□□□□□ -0.38
AC004943.3-201ENST00000624116 EN1Q05925 392 aaPredicted RBP12.65□□□□□ -0.38
AC004943.3-201ENST00000624116 MAP3K7O43318 606 aa12.63□□□□□ -0.39
AC004943.3-201ENST00000624116 TRIM6-TRIM34B2RNG4 842 aa12.62□□□□□ -0.39
AC004943.3-201ENST00000624116 KIAA1468Q9P260 1216 aa12.62□□□□□ -0.39
AC004943.3-201ENST00000624116 CERKQ8TCT0 537 aa12.59□□□□□ -0.39
AC004943.3-201ENST00000624116 IFFO2Q5TF58 517 aa12.57□□□□□ -0.4
AC004943.3-201ENST00000624116 PACS2Q86VP3 889 aa12.57□□□□□ -0.4
AC004943.3-201ENST00000624116 ZFRQ96KR1 1074 aaKnown RBP12.57□□□□□ -0.4
AC004943.3-201ENST00000624116 FAM98CQ17RN3 349 aaKnown RBP12.56□□□□□ -0.4
AC004943.3-201ENST00000624116 NYAP1Q6ZVC0 841 aa12.56□□□□□ -0.4
AC004943.3-201ENST00000624116 SOWAHBA6NEL2 793 aa12.55□□□□□ -0.4
AC004943.3-201ENST00000624116 GRXCR2A6NFK2 248 aa12.55□□□□□ -0.4
AC004943.3-201ENST00000624116 TSR1Q2NL82 804 aaKnown RBP12.55□□□□□ -0.4
AC004943.3-201ENST00000624116 SEPT9Q9UHD8 586 aaPredicted RBP12.53□□□□□ -0.4
AC004943.3-201ENST00000624116 BCAMP50895 628 aa12.5□□□□□ -0.41
AC004943.3-201ENST00000624116 PRSS12P56730 875 aa12.49□□□□□ -0.41
AC004943.3-201ENST00000624116 CDCA7LQ96GN5 454 aa12.49□□□□□ -0.41
AC004943.3-201ENST00000624116 LRCH3Q96II8 777 aa12.49□□□□□ -0.41
AC004943.3-201ENST00000624116 ARHGEF1Q92888 912 aaKnown RBP12.48□□□□□ -0.41
AC004943.3-201ENST00000624116 TSKSQ9UJT2 592 aa12.48□□□□□ -0.41
AC004943.3-201ENST00000624116 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.47□□□□□ -0.41
AC004943.3-201ENST00000624116 RBM27Q9P2N5 1060 aaKnown RBP12.47□□□□□ -0.41
AC004943.3-201ENST00000624116 NBPF26B4DH59 902 aa12.46□□□□□ -0.41
AC004943.3-201ENST00000624116 RGS20O76081 388 aa12.46□□□□□ -0.41
AC004943.3-201ENST00000624116 OSBPP22059 807 aa12.46□□□□□ -0.41
AC004943.3-201ENST00000624116 TSHZ2Q9NRE2 1034 aa12.46□□□□□ -0.41
AC004943.3-201ENST00000624116 TSR3Q9UJK0 312 aaKnown RBP12.45□□□□□ -0.42
AC004943.3-201ENST00000624116 ITGBL1O95965 494 aaPredicted RBP12.44□□□□□ -0.42
AC004943.3-201ENST00000624116 PRIM1P49642 420 aaKnown RBP12.42□□□□□ -0.42
AC004943.3-201ENST00000624116 WBP1LQ9NX94 342 aa12.42□□□□□ -0.42
AC004943.3-201ENST00000624116 A0A0G2JS52 829 aa12.41□□□□□ -0.42
AC004943.3-201ENST00000624116 P3H3Q8IVL6 736 aa12.41□□□□□ -0.42
AC004943.3-201ENST00000624116 HPS5Q9UPZ3 1129 aa12.41□□□□□ -0.42
AC004943.3-201ENST00000624116 HDGFP51858 240 aaKnown RBP12.39□□□□□ -0.43
AC004943.3-201ENST00000624116 TATDN2Q93075 761 aa12.39□□□□□ -0.43
AC004943.3-201ENST00000624116 CDHR5Q9HBB8 845 aa12.39□□□□□ -0.43
AC004943.3-201ENST00000624116 KCNV2Q8TDN2 545 aa12.38□□□□□ -0.43
AC004943.3-201ENST00000624116 PNMA3Q9UL41 463 aa12.38□□□□□ -0.43
AC004943.3-201ENST00000624116 PPP4CP60510 307 aa12.36□□□□□ -0.43
AC004943.3-201ENST00000624116 SMAPO00193 183 aa12.35□□□□□ -0.43
AC004943.3-201ENST00000624116 KCNC4Q03721 635 aa12.35□□□□□ -0.43
AC004943.3-201ENST00000624116 FAM198AQ9UFP1 575 aa12.35□□□□□ -0.43
AC004943.3-201ENST00000624116 SAMD7Q7Z3H4 446 aa12.34□□□□□ -0.43
AC004943.3-201ENST00000624116 NECTIN2Q92692 538 aa12.34□□□□□ -0.43
AC004943.3-201ENST00000624116 NUDT18Q6ZVK8 323 aa12.33□□□□□ -0.44
AC004943.3-201ENST00000624116 SLC4A3P48751 1232 aa12.31□□□□□ -0.44
AC004943.3-201ENST00000624116 PADI6Q6TGC4 694 aa12.3□□□□□ -0.44
AC004943.3-201ENST00000624116 TTC13Q8NBP0 860 aa12.3□□□□□ -0.44
AC004943.3-201ENST00000624116 NPDC1Q9NQX5 325 aaPredicted RBP12.3□□□□□ -0.44
AC004943.3-201ENST00000624116 MLLT3P42568 568 aaPredicted RBP12.29□□□□□ -0.44
AC004943.3-201ENST00000624116 RNF40O75150 1001 aa12.27□□□□□ -0.45
AC004943.3-201ENST00000624116 PLCB2Q00722 1185 aa12.27□□□□□ -0.45
AC004943.3-201ENST00000624116 C3orf80F5H4A9 247 aa12.25□□□□□ -0.45
AC004943.3-201ENST00000624116 SLF2Q8IX21 1173 aa12.25□□□□□ -0.45
AC004943.3-201ENST00000624116 PTGDRQ13258 359 aa12.23□□□□□ -0.45
AC004943.3-201ENST00000624116 IRX2Q9BZI1 471 aaPredicted RBP12.2□□□□□ -0.46
AC004943.3-201ENST00000624116 IL21Q9HBE4 155 aa12.2□□□□□ -0.46
AC004943.3-201ENST00000624116 NUTM2FA1L443 756 aa12.19□□□□□ -0.46
AC004943.3-201ENST00000624116 SWT1Q5T5J6 900 aaKnown RBP12.19□□□□□ -0.46
AC004943.3-201ENST00000624116 EYA1Q99502 592 aa12.19□□□□□ -0.46
AC004943.3-201ENST00000624116 PRR14Q9BWN1 585 aa12.19□□□□□ -0.46
AC004943.3-201ENST00000624116 TJAP1Q5JTD0 557 aa12.18□□□□□ -0.46
AC004943.3-201ENST00000624116 RBM46Q8TBY0 533 aaKnown RBP12.18□□□□□ -0.46
AC004943.3-201ENST00000624116 MTRQ99707 1265 aa12.18□□□□□ -0.46
AC004943.3-201ENST00000624116 SMYD5Q6GMV2 418 aa12.17□□□□□ -0.46
AC004943.3-201ENST00000624116 FCHSD2O94868 740 aa12.16□□□□□ -0.46
AC004943.3-201ENST00000624116 DNAJB2P25686 324 aa12.16□□□□□ -0.46
AC004943.3-201ENST00000624116 SEMA3EO15041 775 aa12.15□□□□□ -0.46
AC004943.3-201ENST00000624116 APLP1P51693 650 aa12.14□□□□□ -0.47
AC004943.3-201ENST00000624116 ADGRG1Q9Y653 693 aa12.12□□□□□ -0.47
AC004943.3-201ENST00000624116 TMEM134Q9H6X4 195 aa12.09□□□□□ -0.47
AC004943.3-201ENST00000624116 TESPA1A2RU30 521 aaPredicted RBP12.08□□□□□ -0.48
AC004943.3-201ENST00000624116 HIC1Q14526 733 aa12.08□□□□□ -0.48
AC004943.3-201ENST00000624116 GGCXP38435 758 aa12.07□□□□□ -0.48
AC004943.3-201ENST00000624116 HAP1P54257 671 aaPredicted RBP12.07□□□□□ -0.48
AC004943.3-201ENST00000624116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.06□□□□□ -0.48
AC004943.3-201ENST00000624116 OATP04181 439 aa12.06□□□□□ -0.48
AC004943.3-201ENST00000624116 RCCD1A6NED2 376 aa12.05□□□□□ -0.48
AC004943.3-201ENST00000624116 PCDHB3Q9Y5E6 796 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms