RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 EN1Q05925 392 aaPredicted RBP8.36□□□□□ -1.07
ATRX-209ENST00000623242 EPAS1Q99814 870 aa8.36□□□□□ -1.07
ATRX-209ENST00000623242 KRTAP3-3Q9BYR6 98 aa8.36□□□□□ -1.07
ATRX-209ENST00000623242 KRTAP3-2Q9BYR7 98 aa8.36□□□□□ -1.07
ATRX-209ENST00000623242 RBM33Q96EV2 1170 aaKnown RBP8.35□□□□□ -1.07
ATRX-209ENST00000623242 JPH4Q96JJ6 628 aa8.35□□□□□ -1.07
ATRX-209ENST00000623242 NPDC1Q9NQX5 325 aaPredicted RBP8.35□□□□□ -1.07
ATRX-209ENST00000623242 PTGDRQ13258 359 aa8.34□□□□□ -1.07
ATRX-209ENST00000623242 TYW1BQ6NUM6 668 aa8.34□□□□□ -1.07
ATRX-209ENST00000623242 FCHSD2O94868 740 aa8.33□□□□□ -1.08
ATRX-209ENST00000623242 TSR1Q2NL82 804 aaKnown RBP8.33□□□□□ -1.08
ATRX-209ENST00000623242 SPNS2Q8IVW8 549 aa8.33□□□□□ -1.08
ATRX-209ENST00000623242 AK7Q96M32 723 aa8.33□□□□□ -1.08
ATRX-209ENST00000623242 GNPATO15228 680 aa8.32□□□□□ -1.08
ATRX-209ENST00000623242 HIC1Q14526 733 aa8.32□□□□□ -1.08
ATRX-209ENST00000623242 KRI1Q8N9T8 703 aaKnown RBP8.32□□□□□ -1.08
ATRX-209ENST00000623242 TRIM66O15016 1216 aa8.31□□□□□ -1.08
ATRX-209ENST00000623242 MAP3K7O43318 606 aa8.31□□□□□ -1.08
ATRX-209ENST00000623242 ZNF687Q8N1G0 1237 aa8.31□□□□□ -1.08
ATRX-209ENST00000623242 ZNF454Q8N9F8 522 aa8.31□□□□□ -1.08
ATRX-209ENST00000623242 LHX6Q9UPM6 363 aa8.31□□□□□ -1.08
ATRX-209ENST00000623242 MAP2K5Q13163 448 aa8.3□□□□□ -1.08
ATRX-209ENST00000623242 MMRN1Q13201 1228 aa8.3□□□□□ -1.08
ATRX-209ENST00000623242 IRF6O14896 467 aa8.29□□□□□ -1.08
ATRX-209ENST00000623242 NEUROD2Q15784 382 aa8.29□□□□□ -1.08
ATRX-209ENST00000623242 FBXW7Q969H0 707 aa8.29□□□□□ -1.08
ATRX-209ENST00000623242 ZDHHC16Q969W1 377 aa8.29□□□□□ -1.08
ATRX-209ENST00000623242 CCDC102AQ96A19 550 aa8.29□□□□□ -1.08
ATRX-209ENST00000623242 ADAM33Q9BZ11 813 aa8.29□□□□□ -1.08
ATRX-209ENST00000623242 MINK1Q8N4C8 1332 aaPredicted RBP8.29□□□□□ -1.08
ATRX-209ENST00000623242 C6orf132Q5T0Z8 1188 aa8.27□□□□□ -1.09
ATRX-209ENST00000623242 GPBP1L1Q9HC44 474 aaPredicted RBP8.27□□□□□ -1.09
ATRX-209ENST00000623242 PDE4DQ08499 809 aa8.26□□□□□ -1.09
ATRX-209ENST00000623242 PSDA5PKW4 1024 aaPredicted RBP8.23□□□□□ -1.09
ATRX-209ENST00000623242 COL9A1P20849 921 aa8.22□□□□□ -1.09
ATRX-209ENST00000623242 PBX2P40425 430 aa8.22□□□□□ -1.09
ATRX-209ENST00000623242 AMHR2Q16671 573 aa8.22□□□□□ -1.09
ATRX-209ENST00000623242 TMEM132AQ24JP5 1023 aa8.22□□□□□ -1.09
ATRX-209ENST00000623242 FAM161AQ3B820 660 aa8.21□□□□□ -1.1
ATRX-209ENST00000623242 PPP4R3BQ5MIZ7 849 aa8.21□□□□□ -1.1
ATRX-209ENST00000623242 PADI6Q6TGC4 694 aa8.21□□□□□ -1.1
ATRX-209ENST00000623242 TTC13Q8NBP0 860 aa8.21□□□□□ -1.1
ATRX-209ENST00000623242 KDM4CQ9H3R0 1056 aa8.21□□□□□ -1.1
ATRX-209ENST00000623242 BCL2L12Q9HB09 334 aa8.21□□□□□ -1.1
ATRX-209ENST00000623242 ANKRD13DQ6ZTN6 518 aa8.2□□□□□ -1.1
ATRX-209ENST00000623242 PHOX2BQ99453 314 aa8.2□□□□□ -1.1
ATRX-209ENST00000623242 FAM198AQ9UFP1 575 aa8.2□□□□□ -1.1
ATRX-209ENST00000623242 PARP9Q8IXQ6 854 aa8.19□□□□□ -1.1
ATRX-209ENST00000623242 CERKQ8TCT0 537 aa8.19□□□□□ -1.1
ATRX-209ENST00000623242 REPIN1Q9BWE0 567 aaKnown RBP8.18□□□□□ -1.1
ATRX-209ENST00000623242 ADGRG1Q9Y653 693 aa8.18□□□□□ -1.1
ATRX-209ENST00000623242 PRSS12P56730 875 aa8.17□□□□□ -1.1
ATRX-209ENST00000623242 CDCA7LQ96GN5 454 aa8.17□□□□□ -1.1
ATRX-209ENST00000623242 RBM27Q9P2N5 1060 aaKnown RBP8.17□□□□□ -1.1
ATRX-209ENST00000623242 AXIN2Q9Y2T1 843 aa8.17□□□□□ -1.1
ATRX-209ENST00000623242 C3orf80F5H4A9 247 aa8.16□□□□□ -1.1
ATRX-209ENST00000623242 TMUB1Q9BVT8 246 aa8.16□□□□□ -1.1
ATRX-209ENST00000623242 PPP1R3GB7ZBB8 358 aa8.15□□□□□ -1.1
ATRX-209ENST00000623242 PTPREP23469 700 aa8.15□□□□□ -1.1
ATRX-209ENST00000623242 LSM11P83369 360 aaKnown RBP eCLIP8.15□□□□□ -1.1
ATRX-209ENST00000623242 POTEEQ6S8J3 1075 aa8.15□□□□□ -1.1
ATRX-209ENST00000623242 METTL3Q86U44 580 aaKnown RBP8.15□□□□□ -1.1
ATRX-209ENST00000623242 NLRP7Q8WX94 980 aa8.15□□□□□ -1.1
ATRX-209ENST00000623242 TSKSQ9UJT2 592 aa8.15□□□□□ -1.1
ATRX-209ENST00000623242 PXYLP1Q8TE99 480 aa8.14□□□□□ -1.11
ATRX-209ENST00000623242 IL27Q8NEV9 243 aa8.13□□□□□ -1.11
ATRX-209ENST00000623242 KCNK17Q96T54 332 aa8.13□□□□□ -1.11
ATRX-209ENST00000623242 FAM117AQ9C073 453 aa8.13□□□□□ -1.11
ATRX-209ENST00000623242 PLEKHG3A1L390 1219 aa8.12□□□□□ -1.11
ATRX-209ENST00000623242 PSEN2P49810 448 aa8.12□□□□□ -1.11
ATRX-209ENST00000623242 MDM2Q00987 491 aaPredicted RBP8.12□□□□□ -1.11
ATRX-209ENST00000623242 TTLL12Q14166 644 aaPredicted RBP8.12□□□□□ -1.11
ATRX-209ENST00000623242 PROX2Q3B8N5 592 aa8.12□□□□□ -1.11
ATRX-209ENST00000623242 GIGYF2Q6Y7W6 1299 aaKnown RBP8.12□□□□□ -1.11
ATRX-209ENST00000623242 RNF166Q96A37 237 aaPredicted RBP8.12□□□□□ -1.11
ATRX-209ENST00000623242 MYT1LQ9UL68 1186 aa8.12□□□□□ -1.11
ATRX-209ENST00000623242 ARHGAP33O14559 1287 aa8.11□□□□□ -1.11
ATRX-209ENST00000623242 OATP04181 439 aa8.11□□□□□ -1.11
ATRX-209ENST00000623242 MS4A1P11836 297 aa8.11□□□□□ -1.11
ATRX-209ENST00000623242 KCNH8Q96L42 1107 aa8.11□□□□□ -1.11
ATRX-209ENST00000623242 TRIM6-TRIM34B2RNG4 842 aa8.1□□□□□ -1.11
ATRX-209ENST00000623242 EYA1Q99502 592 aa8.1□□□□□ -1.11
ATRX-209ENST00000623242 GTF3C3Q9Y5Q9 886 aa8.1□□□□□ -1.11
ATRX-209ENST00000623242 TK2O00142 265 aa8.09□□□□□ -1.11
ATRX-209ENST00000623242 DMRTA1Q5VZB9 504 aa8.09□□□□□ -1.11
ATRX-209ENST00000623242 ZBED2Q9BTP6 218 aa8.09□□□□□ -1.11
ATRX-209ENST00000623242 CLCN1P35523 988 aa8.08□□□□□ -1.12
ATRX-209ENST00000623242 NUDT18Q6ZVK8 323 aa8.08□□□□□ -1.12
ATRX-209ENST00000623242 GPCPD1Q9NPB8 672 aa8.08□□□□□ -1.12
ATRX-209ENST00000623242 RBM46Q8TBY0 533 aaKnown RBP8.07□□□□□ -1.12
ATRX-209ENST00000623242 TATDN2Q93075 761 aa8.07□□□□□ -1.12
ATRX-209ENST00000623242 RCCD1A6NED2 376 aa8.06□□□□□ -1.12
ATRX-209ENST00000623242 SMAPO00193 183 aa8.06□□□□□ -1.12
ATRX-209ENST00000623242 FAM217BQ9NTX9 383 aaPredicted RBP8.06□□□□□ -1.12
ATRX-209ENST00000623242 ONECUT3O60422 494 aaPredicted RBP8.05□□□□□ -1.12
ATRX-209ENST00000623242 SSTR3P32745 418 aaPredicted RBP8.05□□□□□ -1.12
ATRX-209ENST00000623242 ADGRD1Q6QNK2 874 aa8.05□□□□□ -1.12
ATRX-209ENST00000623242 DDRGK1Q96HY6 314 aa8.05□□□□□ -1.12
ATRX-209ENST00000623242 PNMA3Q9UL41 463 aa8.05□□□□□ -1.12
ATRX-209ENST00000623242 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms