RNA–Protein interactions for RNA: ENST00000622827.4

CDH23-214, Transcript of cadherin related 23, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDH23, Length 11,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-214ENST00000622827 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
CDH23-214ENST00000622827 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
CDH23-214ENST00000622827 FANCIQ9NVI1 1328 aa17.78■□□□□ 0.44
CDH23-214ENST00000622827 FAM161AQ3B820 660 aa17.78■□□□□ 0.44
CDH23-214ENST00000622827 MTERF4Q7Z6M4 381 aaKnown RBP17.77■□□□□ 0.44
CDH23-214ENST00000622827 RB1CC1Q8TDY2 1594 aa17.76■□□□□ 0.43
CDH23-214ENST00000622827 STK31Q9BXU1 1019 aa17.76■□□□□ 0.43
CDH23-214ENST00000622827 SPAG9O60271 1321 aaKnown RBP17.76■□□□□ 0.43
CDH23-214ENST00000622827 HOMER1Q86YM7 354 aa17.76■□□□□ 0.43
CDH23-214ENST00000622827 CHMP3Q9Y3E7 222 aa17.76■□□□□ 0.43
CDH23-214ENST00000622827 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
CDH23-214ENST00000622827 CENPQQ7L2Z9 268 aaPredicted RBP17.75■□□□□ 0.43
CDH23-214ENST00000622827 RUFY1Q96T51 708 aa17.75■□□□□ 0.43
CDH23-214ENST00000622827 FOXD4L6Q3SYB3 417 aaPredicted RBP17.75■□□□□ 0.43
CDH23-214ENST00000622827 FOXD4L3Q6VB84 417 aaPredicted RBP17.75■□□□□ 0.43
CDH23-214ENST00000622827 ARGLU1Q9NWB6 273 aaPredicted RBP17.75■□□□□ 0.43
CDH23-214ENST00000622827 ANO8Q9HCE9 1232 aaPredicted RBP17.74■□□□□ 0.43
CDH23-214ENST00000622827 IPO7O95373 1038 aaKnown RBP17.74■□□□□ 0.43
CDH23-214ENST00000622827 MAP7D2Q96T17 732 aa17.74■□□□□ 0.43
CDH23-214ENST00000622827 PDE4AP27815 886 aa17.73■□□□□ 0.43
CDH23-214ENST00000622827 TAF7LQ5H9L4 462 aa17.73■□□□□ 0.43
CDH23-214ENST00000622827 ACBD3Q9H3P7 528 aa17.73■□□□□ 0.43
CDH23-214ENST00000622827 VPS53Q5VIR6 699 aa17.72■□□□□ 0.43
CDH23-214ENST00000622827 SLC4A3P48751 1232 aa17.72■□□□□ 0.43
CDH23-214ENST00000622827 MCTP1Q6DN14 999 aa17.71■□□□□ 0.43
CDH23-214ENST00000622827 PDE3BQ13370 1112 aa17.7■□□□□ 0.42
CDH23-214ENST00000622827 HSP90B2PQ58FF3 399 aa17.7■□□□□ 0.42
CDH23-214ENST00000622827 SAFB2Q14151 953 aaKnown RBP eCLIP17.7■□□□□ 0.42
CDH23-214ENST00000622827 HDAC5Q9UQL6 1122 aa17.7■□□□□ 0.42
CDH23-214ENST00000622827 CCDC66A2RUB6 948 aa17.7■□□□□ 0.42
CDH23-214ENST00000622827 IFT57Q9NWB7 429 aa17.69■□□□□ 0.42
CDH23-214ENST00000622827 HDGFL2Q7Z4V5 671 aaPredicted RBP17.69■□□□□ 0.42
CDH23-214ENST00000622827 CCDC191Q8NCU4 936 aa17.69■□□□□ 0.42
CDH23-214ENST00000622827 CHMP4AQ9BY43 222 aa17.69■□□□□ 0.42
CDH23-214ENST00000622827 ANKRD20A12PQ8NF67 263 aa17.69■□□□□ 0.42
CDH23-214ENST00000622827 RDXP35241 583 aaKnown RBP17.68■□□□□ 0.42
CDH23-214ENST00000622827 FBXO3Q9UK99 471 aa17.68■□□□□ 0.42
CDH23-214ENST00000622827 FAM184AQ8NB25 1140 aa17.68■□□□□ 0.42
CDH23-214ENST00000622827 CLUAP1Q96AJ1 413 aa17.67■□□□□ 0.42
CDH23-214ENST00000622827 NASPP49321 788 aaPredicted RBP17.67■□□□□ 0.42
CDH23-214ENST00000622827 H0YHG0 523 aa17.66■□□□□ 0.42
CDH23-214ENST00000622827 CCDC146Q8IYE0 955 aa17.66■□□□□ 0.42
CDH23-214ENST00000622827 MNS1Q8NEH6 495 aa17.66■□□□□ 0.42
CDH23-214ENST00000622827 CDR1P51861 262 aa17.66■□□□□ 0.42
CDH23-214ENST00000622827 HOOK1Q9UJC3 728 aaKnown RBP17.66■□□□□ 0.42
CDH23-214ENST00000622827 MARCH6O60337 910 aa17.66■□□□□ 0.42
CDH23-214ENST00000622827 ZNF330Q9Y3S2 320 aaPredicted RBP17.66■□□□□ 0.42
CDH23-214ENST00000622827 KIF15Q9NS87 1388 aa17.66■□□□□ 0.42
CDH23-214ENST00000622827 SLC4A10Q6U841 1118 aa17.65■□□□□ 0.42
CDH23-214ENST00000622827 CHMP4CQ96CF2 233 aa17.65■□□□□ 0.42
CDH23-214ENST00000622827 CCDC39Q9UFE4 941 aa17.65■□□□□ 0.42
CDH23-214ENST00000622827 PCMTD1Q96MG8 357 aaPredicted RBP17.65■□□□□ 0.42
CDH23-214ENST00000622827 DCTN1Q14203 1278 aa17.64■□□□□ 0.41
CDH23-214ENST00000622827 BAZ1BQ9UIG0 1483 aaKnown RBP17.64■□□□□ 0.41
CDH23-214ENST00000622827 TOMM22Q9NS69 142 aa17.64■□□□□ 0.41
CDH23-214ENST00000622827 REC8O95072 547 aa17.63■□□□□ 0.41
CDH23-214ENST00000622827 DIAPH3Q9NSV4 1193 aa17.63■□□□□ 0.41
CDH23-214ENST00000622827 RAB3GAP2Q9H2M9 1393 aa17.63■□□□□ 0.41
CDH23-214ENST00000622827 AKAP17AQ02040 695 aaKnown RBP17.62■□□□□ 0.41
CDH23-214ENST00000622827 RILPL2Q969X0 211 aa17.62■□□□□ 0.41
CDH23-214ENST00000622827 ZBED9Q6R2W3 1325 aa17.62■□□□□ 0.41
CDH23-214ENST00000622827 NLRP13Q86W25 1043 aa17.62■□□□□ 0.41
CDH23-214ENST00000622827 VPS8Q8N3P4 1428 aa17.61■□□□□ 0.41
CDH23-214ENST00000622827 FOXD1Q16676 465 aa17.6■□□□□ 0.41
CDH23-214ENST00000622827 PODXL2Q9NZ53 605 aa17.6■□□□□ 0.41
CDH23-214ENST00000622827 CGNL1Q0VF96 1302 aa17.6■□□□□ 0.41
CDH23-214ENST00000622827 LMOD3Q0VAK6 560 aa17.6■□□□□ 0.41
CDH23-214ENST00000622827 RRP1P56182 461 aaKnown RBP17.6■□□□□ 0.41
CDH23-214ENST00000622827 R3HCC1Q9Y3T6 440 aaKnown RBP17.59■□□□□ 0.41
CDH23-214ENST00000622827 ANKRD45Q5TZF3 282 aa17.59■□□□□ 0.41
CDH23-214ENST00000622827 FBXW7Q969H0 707 aa17.59■□□□□ 0.41
CDH23-214ENST00000622827 BICD2Q8TD16 824 aa17.58■□□□□ 0.41
CDH23-214ENST00000622827 NAP1L1P55209 391 aaKnown RBP17.58■□□□□ 0.4
CDH23-214ENST00000622827 STK26Q9P289 416 aa17.57■□□□□ 0.4
CDH23-214ENST00000622827 BCL11BQ9C0K0 894 aaPredicted RBP17.57■□□□□ 0.4
CDH23-214ENST00000622827 CAGE1Q8TC20 777 aa17.57■□□□□ 0.4
CDH23-214ENST00000622827 PRDM2Q13029 1718 aa17.56■□□□□ 0.4
CDH23-214ENST00000622827 TMX4Q9H1E5 349 aaPredicted RBP17.56■□□□□ 0.4
CDH23-214ENST00000622827 SASS6Q6UVJ0 657 aa17.55■□□□□ 0.4
CDH23-214ENST00000622827 NAT10Q9H0A0 1025 aaKnown RBP17.55■□□□□ 0.4
CDH23-214ENST00000622827 CHMP5Q9NZZ3 219 aa17.55■□□□□ 0.4
CDH23-214ENST00000622827 PKD2Q13563 968 aa17.55■□□□□ 0.4
CDH23-214ENST00000622827 LEKR1Q6ZMV7 388 aa17.55■□□□□ 0.4
CDH23-214ENST00000622827 TCEAL9Q9UHQ7 104 aa17.54■□□□□ 0.4
CDH23-214ENST00000622827 PAK3O75914 559 aaPredicted RBP17.54■□□□□ 0.4
CDH23-214ENST00000622827 CRBNQ96SW2 442 aa17.54■□□□□ 0.4
CDH23-214ENST00000622827 TRIM29Q14134 588 aa17.53■□□□□ 0.4
CDH23-214ENST00000622827 ANO2Q9NQ90 1003 aa17.53■□□□□ 0.4
CDH23-214ENST00000622827 PLIN1O60240 522 aa17.53■□□□□ 0.4
CDH23-214ENST00000622827 HSP90AB3PQ58FF7 597 aa17.53■□□□□ 0.4
CDH23-214ENST00000622827 MYBBP1AQ9BQG0 1328 aaKnown RBP17.53■□□□□ 0.4
CDH23-214ENST00000622827 MRE11P49959 708 aa17.53■□□□□ 0.4
CDH23-214ENST00000622827 HDGFP51858 240 aaKnown RBP17.52■□□□□ 0.4
CDH23-214ENST00000622827 BRPF3Q9ULD4 1205 aa17.52■□□□□ 0.4
CDH23-214ENST00000622827 BAZ1AQ9NRL2 1556 aaPredicted RBP17.52■□□□□ 0.4
CDH23-214ENST00000622827 RUFY2Q8WXA3 655 aa17.52■□□□□ 0.4
CDH23-214ENST00000622827 NUCB2P80303 420 aa17.52■□□□□ 0.4
CDH23-214ENST00000622827 TSPYL1Q9H0U9 437 aa17.52■□□□□ 0.39
CDH23-214ENST00000622827 ERCC4Q92889 916 aaPredicted RBP17.51■□□□□ 0.39
CDH23-214ENST00000622827 ABCC8Q09428 1581 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms