RNA–Protein interactions for RNA: ENST00000621708.4

PCDH15-233, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-233ENST00000621708 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
PCDH15-233ENST00000621708 PDE3BQ13370 1112 aa11.26□□□□□ -0.61
PCDH15-233ENST00000621708 TRAK1Q9UPV9 953 aa11.26□□□□□ -0.61
PCDH15-233ENST00000621708 KIF14Q15058 1648 aa11.26□□□□□ -0.61
PCDH15-233ENST00000621708 U2AF1L5P0DN76 240 aaPredicted RBP11.26□□□□□ -0.61
PCDH15-233ENST00000621708 IRX6P78412 446 aaPredicted RBP11.26□□□□□ -0.61
PCDH15-233ENST00000621708 U2AF1Q01081 240 aaKnown RBP eCLIP11.26□□□□□ -0.61
PCDH15-233ENST00000621708 PCF11O94913 1555 aaKnown RBP11.25□□□□□ -0.61
PCDH15-233ENST00000621708 MYBBP1AQ9BQG0 1328 aaKnown RBP11.25□□□□□ -0.61
PCDH15-233ENST00000621708 DAPK1P53355 1430 aa11.25□□□□□ -0.61
PCDH15-233ENST00000621708 ST20-MTHFSA0A0A6YYL1 179 aa11.25□□□□□ -0.61
PCDH15-233ENST00000621708 CGNL1Q0VF96 1302 aa11.25□□□□□ -0.61
PCDH15-233ENST00000621708 THOC2Q8NI27 1593 aaKnown RBP11.24□□□□□ -0.61
PCDH15-233ENST00000621708 POGZQ7Z3K3 1410 aa11.24□□□□□ -0.61
PCDH15-233ENST00000621708 FRAT1Q92837 279 aaPredicted RBP11.24□□□□□ -0.61
PCDH15-233ENST00000621708 KIAA1107Q9UPP5 1409 aa11.23□□□□□ -0.61
PCDH15-233ENST00000621708 NGEFQ8N5V2 710 aa11.23□□□□□ -0.61
PCDH15-233ENST00000621708 CCDC141Q6ZP82 1450 aa11.23□□□□□ -0.61
PCDH15-233ENST00000621708 CSB-PGBD3P0DP91 1061 aa11.22□□□□□ -0.61
PCDH15-233ENST00000621708 HDAC5Q9UQL6 1122 aa11.22□□□□□ -0.61
PCDH15-233ENST00000621708 SOX12O15370 315 aa11.22□□□□□ -0.61
PCDH15-233ENST00000621708 AFAP1Q8N556 730 aa11.22□□□□□ -0.61
PCDH15-233ENST00000621708 ARXQ96QS3 562 aa11.22□□□□□ -0.61
PCDH15-233ENST00000621708 NUTM2DQ5VT03 806 aaPredicted RBP11.21□□□□□ -0.61
PCDH15-233ENST00000621708 CDK13Q14004 1512 aaKnown RBP11.21□□□□□ -0.62
PCDH15-233ENST00000621708 SCAPERQ9BY12 1400 aa11.21□□□□□ -0.62
PCDH15-233ENST00000621708 CENPJQ9HC77 1338 aaPredicted RBP11.21□□□□□ -0.62
PCDH15-233ENST00000621708 ZNF608Q9ULD9 1512 aaPredicted RBP11.2□□□□□ -0.62
PCDH15-233ENST00000621708 COG3Q96JB2 828 aa11.2□□□□□ -0.62
PCDH15-233ENST00000621708 SLC52A1Q9NWF4 448 aa11.2□□□□□ -0.62
PCDH15-233ENST00000621708 AMPHP49418 695 aa11.19□□□□□ -0.62
PCDH15-233ENST00000621708 PANK3Q9H999 370 aa11.19□□□□□ -0.62
PCDH15-233ENST00000621708 RPGRIP1LQ68CZ1 1315 aa11.19□□□□□ -0.62
PCDH15-233ENST00000621708 ANP32EQ9BTT0 268 aa11.19□□□□□ -0.62
PCDH15-233ENST00000621708 OS9Q13438 667 aaPredicted RBP11.18□□□□□ -0.62
PCDH15-233ENST00000621708 GOLGA2Q08379 1002 aa11.18□□□□□ -0.62
PCDH15-233ENST00000621708 WDR97A6NE52 1622 aa11.17□□□□□ -0.62
PCDH15-233ENST00000621708 NPHP1O15259 732 aa11.17□□□□□ -0.62
PCDH15-233ENST00000621708 CD109Q6YHK3 1445 aa11.17□□□□□ -0.62
PCDH15-233ENST00000621708 CAMSAP2Q08AD1 1489 aa11.17□□□□□ -0.62
PCDH15-233ENST00000621708 PLB1Q6P1J6 1458 aa11.16□□□□□ -0.62
PCDH15-233ENST00000621708 RCAN3Q9UKA8 241 aa11.16□□□□□ -0.62
PCDH15-233ENST00000621708 PTPN23Q9H3S7 1636 aa11.16□□□□□ -0.62
PCDH15-233ENST00000621708 STK31Q9BXU1 1019 aa11.16□□□□□ -0.62
PCDH15-233ENST00000621708 GOLGA6L22H0YM25 854 aa11.15□□□□□ -0.62
PCDH15-233ENST00000621708 ARHGEF11O15085 1522 aa11.15□□□□□ -0.63
PCDH15-233ENST00000621708 NCLP19338 710 aaKnown RBP11.14□□□□□ -0.63
PCDH15-233ENST00000621708 MINK1Q8N4C8 1332 aaPredicted RBP11.14□□□□□ -0.63
PCDH15-233ENST00000621708 ANKRD30BQ9BXX2 1392 aa11.14□□□□□ -0.63
PCDH15-233ENST00000621708 ADAMTS12P58397 1594 aa11.14□□□□□ -0.63
PCDH15-233ENST00000621708 CCDC7Q96M83 1385 aa11.14□□□□□ -0.63
PCDH15-233ENST00000621708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.14□□□□□ -0.63
PCDH15-233ENST00000621708 PRKRIP1Q9H875 184 aaPredicted RBP11.14□□□□□ -0.63
PCDH15-233ENST00000621708 THEMISQ8N1K5 641 aaPredicted RBP11.13□□□□□ -0.63
PCDH15-233ENST00000621708 CTTNBP2Q8WZ74 1663 aa11.13□□□□□ -0.63
PCDH15-233ENST00000621708 WDR62O43379 1518 aa11.13□□□□□ -0.63
PCDH15-233ENST00000621708 ADGRL1O94910 1474 aa11.13□□□□□ -0.63
PCDH15-233ENST00000621708 RAPGEF6Q8TEU7 1601 aa11.13□□□□□ -0.63
PCDH15-233ENST00000621708 PPP6R1Q9UPN7 881 aa11.12□□□□□ -0.63
PCDH15-233ENST00000621708 RWDD1Q9H446 243 aaPredicted RBP11.12□□□□□ -0.63
PCDH15-233ENST00000621708 UGGT2Q9NYU1 1516 aa11.12□□□□□ -0.63
PCDH15-233ENST00000621708 AKNAQ7Z591 1439 aa11.12□□□□□ -0.63
PCDH15-233ENST00000621708 PMFBP1Q8TBY8 1022 aa11.11□□□□□ -0.63
PCDH15-233ENST00000621708 CNTLNQ9NXG0 1405 aa11.11□□□□□ -0.63
PCDH15-233ENST00000621708 WASHC2AQ641Q2 1341 aa11.11□□□□□ -0.63
PCDH15-233ENST00000621708 NAIPQ13075 1403 aa11.11□□□□□ -0.63
PCDH15-233ENST00000621708 SENP3-EIF4A1A0A087X0R7 540 aa11.11□□□□□ -0.63
PCDH15-233ENST00000621708 MCCP23508 829 aa11.1□□□□□ -0.63
PCDH15-233ENST00000621708 HMMRO75330 724 aa11.09□□□□□ -0.63
PCDH15-233ENST00000621708 ABCC5O15440 1437 aa11.09□□□□□ -0.63
PCDH15-233ENST00000621708 E9PSI1 815 aa11.09□□□□□ -0.63
PCDH15-233ENST00000621708 ITSN2Q9NZM3 1697 aa11.09□□□□□ -0.63
PCDH15-233ENST00000621708 DENND4BO75064 1496 aaPredicted RBP11.08□□□□□ -0.64
PCDH15-233ENST00000621708 DIAPH1O60610 1272 aaKnown RBP11.08□□□□□ -0.64
PCDH15-233ENST00000621708 ATF3P18847 181 aa11.08□□□□□ -0.64
PCDH15-233ENST00000621708 RGS3P49796 1198 aa11.08□□□□□ -0.64
PCDH15-233ENST00000621708 SMC4Q9NTJ3 1288 aa11.08□□□□□ -0.64
PCDH15-233ENST00000621708 KIF7Q2M1P5 1343 aa11.08□□□□□ -0.64
PCDH15-233ENST00000621708 KIF21AQ7Z4S6 1674 aa11.08□□□□□ -0.64
PCDH15-233ENST00000621708 PSME1Q06323 249 aa11.08□□□□□ -0.64
PCDH15-233ENST00000621708 TXNDC2Q86VQ3 553 aa11.08□□□□□ -0.64
PCDH15-233ENST00000621708 C1orf141Q5JVX7 400 aa11.07□□□□□ -0.64
PCDH15-233ENST00000621708 ZBED9Q6R2W3 1325 aa11.07□□□□□ -0.64
PCDH15-233ENST00000621708 TEX14Q8IWB6 1497 aa11.07□□□□□ -0.64
PCDH15-233ENST00000621708 ITPRIPQ8IWB1 547 aa11.06□□□□□ -0.64
PCDH15-233ENST00000621708 ERBINQ96RT1 1412 aa11.06□□□□□ -0.64
PCDH15-233ENST00000621708 CCDC9Q9Y3X0 531 aaKnown RBP11.06□□□□□ -0.64
PCDH15-233ENST00000621708 FANCAO15360 1455 aa11.06□□□□□ -0.64
PCDH15-233ENST00000621708 NUTM2FA1L443 756 aa11.06□□□□□ -0.64
PCDH15-233ENST00000621708 KIAA0556O60303 1618 aa11.06□□□□□ -0.64
PCDH15-233ENST00000621708 RAPGEF3O95398 923 aa11.06□□□□□ -0.64
PCDH15-233ENST00000621708 KCNJ4P48050 445 aa11.05□□□□□ -0.64
PCDH15-233ENST00000621708 BRD4O60885 1362 aaPredicted RBP11.05□□□□□ -0.64
PCDH15-233ENST00000621708 GPRASP1Q5JY77 1395 aa11.05□□□□□ -0.64
PCDH15-233ENST00000621708 EIF4G3O43432 1585 aaKnown RBP11.05□□□□□ -0.64
PCDH15-233ENST00000621708 CCDC146Q8IYE0 955 aa11.05□□□□□ -0.64
PCDH15-233ENST00000621708 GPATCH3Q96I76 525 aa11.04□□□□□ -0.64
PCDH15-233ENST00000621708 CFAP70Q5T0N1 1121 aa11.04□□□□□ -0.64
PCDH15-233ENST00000621708 B4GALNT3Q6L9W6 998 aa11.04□□□□□ -0.64
PCDH15-233ENST00000621708 NCOA1Q15788 1441 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms