RNA–Protein interactions for RNA: ENST00000620859.4

LINC01515-217, Transcript of long intergenic non-protein coding RNA 1515, human

TSL 5 BASIC

Gene LINC01515, Length 694 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01515-217	ENST00000620859	PLA2G2E	Q9NZK7	142 aa		10.5	□□□□□ -0.73
LINC01515-217	ENST00000620859	PDIA6	Q15084	440 aa		10.49	□□□□□ -0.73
LINC01515-217	ENST00000620859	MRPL50	Q8N5N7	158 aa	Known RBP	10.49	□□□□□ -0.73
LINC01515-217	ENST00000620859	PROX2	Q3B8N5	592 aa		10.48	□□□□□ -0.73
LINC01515-217	ENST00000620859	C6orf132	Q5T0Z8	1188 aa		10.48	□□□□□ -0.73
LINC01515-217	ENST00000620859	DDX12P	Q92771	950 aa		10.48	□□□□□ -0.73
LINC01515-217	ENST00000620859	NBPF3	Q9H094	633 aa		10.48	□□□□□ -0.73
LINC01515-217	ENST00000620859	E2F4	Q16254	413 aa		10.47	□□□□□ -0.73
LINC01515-217	ENST00000620859	RABGEF1	Q9UJ41	708 aa		10.47	□□□□□ -0.73
LINC01515-217	ENST00000620859	THSD4	Q6ZMP0	1018 aa		10.46	□□□□□ -0.73
LINC01515-217	ENST00000620859	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.46	□□□□□ -0.73
LINC01515-217	ENST00000620859	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.45	□□□□□ -0.74
LINC01515-217	ENST00000620859	PTPN5	P54829	565 aa		10.45	□□□□□ -0.74
LINC01515-217	ENST00000620859	WNT2B	Q93097	391 aa		10.45	□□□□□ -0.74
LINC01515-217	ENST00000620859	GOLGA8CP	A6NN73	597 aa		10.44	□□□□□ -0.74
LINC01515-217	ENST00000620859	RBM33	Q96EV2	1170 aa	Known RBP	10.44	□□□□□ -0.74
LINC01515-217	ENST00000620859	ONECUT3	O60422	494 aa	Predicted RBP	10.43	□□□□□ -0.74
LINC01515-217	ENST00000620859	WDR70	Q9NW82	654 aa		10.43	□□□□□ -0.74
LINC01515-217	ENST00000620859	EN1	Q05925	392 aa	Predicted RBP	10.41	□□□□□ -0.74
LINC01515-217	ENST00000620859	NBR1	Q14596	966 aa		10.41	□□□□□ -0.74
LINC01515-217	ENST00000620859	KIAA1468	Q9P260	1216 aa		10.41	□□□□□ -0.74
LINC01515-217	ENST00000620859	LAPTM4B	Q86VI4	370 aa		10.39	□□□□□ -0.75
LINC01515-217	ENST00000620859	TRIM6-TRIM34	B2RNG4	842 aa		10.38	□□□□□ -0.75
LINC01515-217	ENST00000620859	TSR1	Q2NL82	804 aa	Known RBP	10.38	□□□□□ -0.75
LINC01515-217	ENST00000620859	MAP3K7	O43318	606 aa		10.37	□□□□□ -0.75
LINC01515-217	ENST00000620859	PRIM1	P49642	420 aa	Known RBP	10.37	□□□□□ -0.75
LINC01515-217	ENST00000620859	ANKK1	Q8NFD2	765 aa		10.36	□□□□□ -0.75
LINC01515-217	ENST00000620859	ZFR	Q96KR1	1074 aa	Known RBP	10.34	□□□□□ -0.75
LINC01515-217	ENST00000620859	TSHZ2	Q9NRE2	1034 aa		10.34	□□□□□ -0.75
LINC01515-217	ENST00000620859	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.34	□□□□□ -0.75
LINC01515-217	ENST00000620859	GRXCR2	A6NFK2	248 aa		10.33	□□□□□ -0.76
LINC01515-217	ENST00000620859	TSKS	Q9UJT2	592 aa		10.33	□□□□□ -0.76
LINC01515-217	ENST00000620859	SOWAHB	A6NEL2	793 aa		10.32	□□□□□ -0.76
LINC01515-217	ENST00000620859	BCAM	P50895	628 aa		10.32	□□□□□ -0.76
LINC01515-217	ENST00000620859	IFFO2	Q5TF58	517 aa		10.32	□□□□□ -0.76
LINC01515-217	ENST00000620859	OSBP	P22059	807 aa		10.31	□□□□□ -0.76
LINC01515-217	ENST00000620859	FAM98C	Q17RN3	349 aa	Known RBP	10.31	□□□□□ -0.76
LINC01515-217	ENST00000620859	PACS2	Q86VP3	889 aa		10.29	□□□□□ -0.76
LINC01515-217	ENST00000620859	PRSS12	P56730	875 aa		10.28	□□□□□ -0.76
LINC01515-217	ENST00000620859	CERK	Q8TCT0	537 aa		10.28	□□□□□ -0.76
LINC01515-217	ENST00000620859	CDCA7L	Q96GN5	454 aa		10.28	□□□□□ -0.76
LINC01515-217	ENST00000620859	FAM198A	Q9UFP1	575 aa		10.28	□□□□□ -0.76
LINC01515-217	ENST00000620859	CDHR5	Q9HBB8	845 aa		10.26	□□□□□ -0.77
LINC01515-217	ENST00000620859	WBP1L	Q9NX94	342 aa		10.25	□□□□□ -0.77
LINC01515-217	ENST00000620859	NYAP1	Q6ZVC0	841 aa		10.24	□□□□□ -0.77
LINC01515-217	ENST00000620859	ARHGEF1	Q92888	912 aa	Known RBP	10.24	□□□□□ -0.77
LINC01515-217	ENST00000620859	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.24	□□□□□ -0.77
LINC01515-217	ENST00000620859	C3orf80	F5H4A9	247 aa		10.23	□□□□□ -0.77
LINC01515-217	ENST00000620859	ITGBL1	O95965	494 aa	Predicted RBP	10.23	□□□□□ -0.77
LINC01515-217	ENST00000620859	LRCH3	Q96II8	777 aa		10.23	□□□□□ -0.77
LINC01515-217	ENST00000620859	KCNV2	Q8TDN2	545 aa		10.22	□□□□□ -0.77
LINC01515-217	ENST00000620859	TSR3	Q9UJK0	312 aa	Known RBP	10.22	□□□□□ -0.77
LINC01515-217	ENST00000620859		A0A0G2JS52	829 aa		10.21	□□□□□ -0.77
LINC01515-217	ENST00000620859	SMAP	O00193	183 aa		10.21	□□□□□ -0.77
LINC01515-217	ENST00000620859	TATDN2	Q93075	761 aa		10.21	□□□□□ -0.77
LINC01515-217	ENST00000620859	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.21	□□□□□ -0.77
LINC01515-217	ENST00000620859	HPS5	Q9UPZ3	1129 aa		10.21	□□□□□ -0.77
LINC01515-217	ENST00000620859	RBM27	Q9P2N5	1060 aa	Known RBP	10.2	□□□□□ -0.78
LINC01515-217	ENST00000620859	RGS20	O76081	388 aa		10.19	□□□□□ -0.78
LINC01515-217	ENST00000620859	TTC13	Q8NBP0	860 aa		10.19	□□□□□ -0.78
LINC01515-217	ENST00000620859	NBPF26	B4DH59	902 aa		10.18	□□□□□ -0.78
LINC01515-217	ENST00000620859	MLLT3	P42568	568 aa	Predicted RBP	10.18	□□□□□ -0.78
LINC01515-217	ENST00000620859	PNMA3	Q9UL41	463 aa		10.18	□□□□□ -0.78
LINC01515-217	ENST00000620859	SAMD7	Q7Z3H4	446 aa		10.17	□□□□□ -0.78
LINC01515-217	ENST00000620859	NUDT18	Q6ZVK8	323 aa		10.15	□□□□□ -0.78
LINC01515-217	ENST00000620859	PPP4C	P60510	307 aa		10.14	□□□□□ -0.79
LINC01515-217	ENST00000620859	PADI6	Q6TGC4	694 aa		10.14	□□□□□ -0.79
LINC01515-217	ENST00000620859	KCNC4	Q03721	635 aa		10.12	□□□□□ -0.79
LINC01515-217	ENST00000620859	PLCB2	Q00722	1185 aa		10.1	□□□□□ -0.79
LINC01515-217	ENST00000620859	P3H3	Q8IVL6	736 aa		10.09	□□□□□ -0.79
LINC01515-217	ENST00000620859	PTGDR	Q13258	359 aa		10.08	□□□□□ -0.8
LINC01515-217	ENST00000620859	EYA1	Q99502	592 aa		10.08	□□□□□ -0.8
LINC01515-217	ENST00000620859	HDGF	P51858	240 aa	Known RBP	10.07	□□□□□ -0.8
LINC01515-217	ENST00000620859	TJAP1	Q5JTD0	557 aa		10.07	□□□□□ -0.8
LINC01515-217	ENST00000620859	SEMA3E	O15041	775 aa		10.05	□□□□□ -0.8
LINC01515-217	ENST00000620859	SWT1	Q5T5J6	900 aa	Known RBP	10.05	□□□□□ -0.8
LINC01515-217	ENST00000620859	RNF40	O75150	1001 aa		10.03	□□□□□ -0.8
LINC01515-217	ENST00000620859	APLP1	P51693	650 aa		10.03	□□□□□ -0.8
LINC01515-217	ENST00000620859	MTR	Q99707	1265 aa		10.02	□□□□□ -0.81
LINC01515-217	ENST00000620859	NUTM2F	A1L443	756 aa		10.01	□□□□□ -0.81
LINC01515-217	ENST00000620859	SLF2	Q8IX21	1173 aa		10.01	□□□□□ -0.81
LINC01515-217	ENST00000620859	IL21	Q9HBE4	155 aa		10.01	□□□□□ -0.81
LINC01515-217	ENST00000620859	NECTIN2	Q92692	538 aa		10	□□□□□ -0.81
LINC01515-217	ENST00000620859	IRX2	Q9BZI1	471 aa	Predicted RBP	10	□□□□□ -0.81
LINC01515-217	ENST00000620859	ADGRG1	Q9Y653	693 aa		10	□□□□□ -0.81
LINC01515-217	ENST00000620859	ZNF516	Q92618	1163 aa		9.98	□□□□□ -0.81
LINC01515-217	ENST00000620859	TESPA1	A2RU30	521 aa	Predicted RBP	9.97	□□□□□ -0.81
LINC01515-217	ENST00000620859	FCHSD2	O94868	740 aa		9.97	□□□□□ -0.81
LINC01515-217	ENST00000620859	RBM46	Q8TBY0	533 aa	Known RBP	9.97	□□□□□ -0.81
LINC01515-217	ENST00000620859	DNAJB2	P25686	324 aa		9.96	□□□□□ -0.82
LINC01515-217	ENST00000620859	FAM161A	Q3B820	660 aa		9.96	□□□□□ -0.82
LINC01515-217	ENST00000620859	SLC4A3	P48751	1232 aa		9.95	□□□□□ -0.82
LINC01515-217	ENST00000620859	TMEM134	Q9H6X4	195 aa		9.95	□□□□□ -0.82
LINC01515-217	ENST00000620859	RCCD1	A6NED2	376 aa		9.93	□□□□□ -0.82
LINC01515-217	ENST00000620859	RBM26	Q5T8P6	1007 aa	Known RBP	9.92	□□□□□ -0.82
LINC01515-217	ENST00000620859	PPP1R18	Q6NYC8	613 aa		9.92	□□□□□ -0.82
LINC01515-217	ENST00000620859	NKX2-3	Q8TAU0	364 aa		9.92	□□□□□ -0.82
LINC01515-217	ENST00000620859	COPS2	P61201	443 aa		9.91	□□□□□ -0.82
LINC01515-217	ENST00000620859	PRR14	Q9BWN1	585 aa		9.91	□□□□□ -0.82
LINC01515-217	ENST00000620859	HAP1	P54257	671 aa	Predicted RBP	9.9	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms