RNA–Protein interactions for RNA: ENST00000620578.4

COPS7B-224, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2 BASIC

Gene COPS7B, Length 2,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-224ENST00000620578 MLH3Q9UHC1 1453 aa21.96■■□□□ 1.11
COPS7B-224ENST00000620578 L3MBTL2Q969R5 705 aa21.95■■□□□ 1.1
COPS7B-224ENST00000620578 FRMPD1Q5SYB0 1578 aa21.95■■□□□ 1.1
COPS7B-224ENST00000620578 PPP1R15AO75807 674 aaPredicted RBP21.95■■□□□ 1.1
COPS7B-224ENST00000620578 A2MP01023 1474 aa21.94■■□□□ 1.1
COPS7B-224ENST00000620578 HECW2Q9P2P5 1572 aa21.93■■□□□ 1.1
COPS7B-224ENST00000620578 ABCA6Q8N139 1617 aa21.93■■□□□ 1.1
COPS7B-224ENST00000620578 HIRIP3Q9BW71 556 aaPredicted RBP21.91■■□□□ 1.1
COPS7B-224ENST00000620578 TEX14Q8IWB6 1497 aa21.91■■□□□ 1.1
COPS7B-224ENST00000620578 UNC13BO14795 1591 aa21.91■■□□□ 1.1
COPS7B-224ENST00000620578 KDM5DQ9BY66 1539 aa21.9■■□□□ 1.1
COPS7B-224ENST00000620578 ACIN1Q9UKV3 1341 aaKnown RBP21.88■■□□□ 1.09
COPS7B-224ENST00000620578 PLA2R1Q13018 1463 aa21.87■■□□□ 1.09
COPS7B-224ENST00000620578 DIP2CQ9Y2E4 1556 aa21.87■■□□□ 1.09
COPS7B-224ENST00000620578 RPRD2Q5VT52 1461 aaKnown RBP21.85■■□□□ 1.09
COPS7B-224ENST00000620578 MAGI2Q86UL8 1455 aa21.85■■□□□ 1.09
COPS7B-224ENST00000620578 RGL3Q3MIN7 710 aa21.85■■□□□ 1.09
COPS7B-224ENST00000620578 MLECQ14165 292 aa21.85■■□□□ 1.09
COPS7B-224ENST00000620578 IQGAP3Q86VI3 1631 aa21.84■■□□□ 1.09
COPS7B-224ENST00000620578 ZNF316A6NFI3 1004 aaPredicted RBP21.83■■□□□ 1.09
COPS7B-224ENST00000620578 ZNF326Q5BKZ1 582 aaKnown RBP21.83■■□□□ 1.09
COPS7B-224ENST00000620578 MROH1Q8NDA8 1641 aa21.83■■□□□ 1.09
COPS7B-224ENST00000620578 KDM2AQ9Y2K7 1162 aa21.83■■□□□ 1.09
COPS7B-224ENST00000620578 NBPF8Q3BBV2 869 aa21.82■■□□□ 1.08
COPS7B-224ENST00000620578 TIMELESSQ9UNS1 1208 aa21.82■■□□□ 1.08
COPS7B-224ENST00000620578 CFAP65Q6ZU64 1925 aaKnown RBP21.82■■□□□ 1.08
COPS7B-224ENST00000620578 WASHC2CQ9Y4E1 1318 aa21.8■■□□□ 1.08
COPS7B-224ENST00000620578 KANK1Q14678 1352 aa21.79■■□□□ 1.08
COPS7B-224ENST00000620578 DEPDC5O75140 1603 aa21.79■■□□□ 1.08
COPS7B-224ENST00000620578 E9PCH4 1651 aa21.77■■□□□ 1.08
COPS7B-224ENST00000620578 DCAF11Q8TEB1 546 aa21.76■■□□□ 1.07
COPS7B-224ENST00000620578 SIGLEC1Q9BZZ2 1709 aa21.76■■□□□ 1.07
COPS7B-224ENST00000620578 CCDC144AA2RUR9 1427 aa21.75■■□□□ 1.07
COPS7B-224ENST00000620578 PRDM15P57071 1507 aaPredicted RBP21.75■■□□□ 1.07
COPS7B-224ENST00000620578 ZMYM4Q5VZL5 1548 aa21.75■■□□□ 1.07
COPS7B-224ENST00000620578 ATP10AO60312 1499 aa21.74■■□□□ 1.07
COPS7B-224ENST00000620578 EIF2AK4Q9P2K8 1649 aaKnown RBP21.74■■□□□ 1.07
COPS7B-224ENST00000620578 VWDEQ8N2E2 1590 aa21.73■■□□□ 1.07
COPS7B-224ENST00000620578 CEP152O94986 1710 aa21.73■■□□□ 1.07
COPS7B-224ENST00000620578 UGGT1Q9NYU2 1555 aa21.71■■□□□ 1.07
COPS7B-224ENST00000620578 ARID4BQ4LE39 1312 aaPredicted RBP21.71■■□□□ 1.07
COPS7B-224ENST00000620578 RNF17Q9BXT8 1623 aaKnown RBP21.68■■□□□ 1.06
COPS7B-224ENST00000620578 FBXO31Q5XUX0 539 aaPredicted RBP21.68■■□□□ 1.06
COPS7B-224ENST00000620578 NPATQ14207 1427 aa21.68■■□□□ 1.06
COPS7B-224ENST00000620578 TET3O43151 1660 aa21.67■■□□□ 1.06
COPS7B-224ENST00000620578 ABCC3O15438 1527 aa21.65■■□□□ 1.06
COPS7B-224ENST00000620578 CHGAP10645 457 aaKnown RBP21.65■■□□□ 1.06
COPS7B-224ENST00000620578 DIEXFQ68CQ4 756 aaKnown RBP21.65■■□□□ 1.06
COPS7B-224ENST00000620578 SENP3Q9H4L4 574 aaPredicted RBP21.64■■□□□ 1.05
COPS7B-224ENST00000620578 EFCAB6Q5THR3 1501 aa21.64■■□□□ 1.05
COPS7B-224ENST00000620578 PTPRTO14522 1441 aa21.63■■□□□ 1.05
COPS7B-224ENST00000620578 PLPPR3Q6T4P5 718 aa21.61■■□□□ 1.05
COPS7B-224ENST00000620578 CLTCL1P53675 1640 aa21.6■■□□□ 1.05
COPS7B-224ENST00000620578 SPHKAPQ2M3C7 1700 aa21.6■■□□□ 1.05
COPS7B-224ENST00000620578 ARHGEF40Q8TER5 1519 aa21.6■■□□□ 1.05
COPS7B-224ENST00000620578 BCORL1Q5H9F3 1711 aa21.59■■□□□ 1.05
COPS7B-224ENST00000620578 HSPA5P11021 654 aaKnown RBP21.59■■□□□ 1.05
COPS7B-224ENST00000620578 NUTM2DQ5VT03 806 aaPredicted RBP21.58■■□□□ 1.05
COPS7B-224ENST00000620578 LMTK2Q8IWU2 1503 aa21.58■■□□□ 1.05
COPS7B-224ENST00000620578 NBPF1Q3BBV0 1214 aa21.58■■□□□ 1.04
COPS7B-224ENST00000620578 TRPM2O94759 1503 aa21.57■■□□□ 1.04
COPS7B-224ENST00000620578 SPATA31E1Q6ZUB1 1445 aa21.56■■□□□ 1.04
COPS7B-224ENST00000620578 CAMSAP1Q5T5Y3 1602 aa21.55■■□□□ 1.04
COPS7B-224ENST00000620578 IDI1Q13907 227 aa21.55■■□□□ 1.04
COPS7B-224ENST00000620578 CEBPAP49715 358 aaPredicted RBP21.53■■□□□ 1.04
COPS7B-224ENST00000620578 AGLP35573 1532 aa21.52■■□□□ 1.04
COPS7B-224ENST00000620578 C11orf95C9JLR9 678 aaPredicted RBP21.5■■□□□ 1.03
COPS7B-224ENST00000620578 EIF4G2P78344 907 aaKnown RBP eCLIP21.5■■□□□ 1.033e-10■■■■■ 43
COPS7B-224ENST00000620578 DDX10Q13206 875 aaKnown RBP21.5■■□□□ 1.03
COPS7B-224ENST00000620578 CLTCQ00610 1675 aaKnown RBP21.5■■□□□ 1.03
COPS7B-224ENST00000620578 REREQ9P2R6 1566 aa21.5■■□□□ 1.03
COPS7B-224ENST00000620578 ESF1Q9H501 851 aaKnown RBP21.5■■□□□ 1.03
COPS7B-224ENST00000620578 CARD11Q9BXL7 1154 aa21.49■■□□□ 1.03
COPS7B-224ENST00000620578 NOS1P29475 1434 aa21.48■■□□□ 1.03
COPS7B-224ENST00000620578 ADGRF5Q8IZF2 1346 aa21.48■■□□□ 1.03
COPS7B-224ENST00000620578 PRAG1Q86YV5 1406 aa21.47■■□□□ 1.03
COPS7B-224ENST00000620578 SYNMO15061 1565 aa21.47■■□□□ 1.03
COPS7B-224ENST00000620578 UHRF1BP1Q6BDS2 1440 aa21.46■■□□□ 1.03
COPS7B-224ENST00000620578 ZMYM3Q14202 1370 aa21.46■■□□□ 1.03
COPS7B-224ENST00000620578 MROH2AA6NES4 1674 aa21.44■■□□□ 1.02
COPS7B-224ENST00000620578 ARHGAP31Q2M1Z3 1444 aa21.44■■□□□ 1.02
COPS7B-224ENST00000620578 ROCK2O75116 1388 aaKnown RBP21.44■■□□□ 1.02
COPS7B-224ENST00000620578 CNTLNQ9NXG0 1405 aa21.44■■□□□ 1.02
COPS7B-224ENST00000620578 MIER1Q8N108 512 aa21.43■■□□□ 1.02
COPS7B-224ENST00000620578 CFAP70Q5T0N1 1121 aa21.42■■□□□ 1.02
COPS7B-224ENST00000620578 USP47Q96K76 1375 aa21.41■■□□□ 1.02
COPS7B-224ENST00000620578 ZC3H13Q5T200 1668 aaKnown RBP21.41■■□□□ 1.02
COPS7B-224ENST00000620578 ST20-MTHFSA0A0A6YYL1 179 aa21.4■■□□□ 1.02
COPS7B-224ENST00000620578 PPP6R1Q9UPN7 881 aa21.4■■□□□ 1.02
COPS7B-224ENST00000620578 KIF1BO60333 1816 aa21.4■■□□□ 1.02
COPS7B-224ENST00000620578 WASHC2AQ641Q2 1341 aa21.39■■□□□ 1.02
COPS7B-224ENST00000620578 PREX1Q8TCU6 1659 aa21.39■■□□□ 1.02
COPS7B-224ENST00000620578 POLR3GLQ9BT43 218 aa21.39■■□□□ 1.01
COPS7B-224ENST00000620578 ERVK-7P63135 1459 aa21.39■■□□□ 1.01
COPS7B-224ENST00000620578 RALGAPBQ86X10 1494 aa21.39■■□□□ 1.01
COPS7B-224ENST00000620578 STAG3Q9UJ98 1225 aa21.37■■□□□ 1.01
COPS7B-224ENST00000620578 SLC52A1Q9NWF4 448 aa21.37■■□□□ 1.01
COPS7B-224ENST00000620578 ADGRB3O60242 1522 aa21.35■■□□□ 1.01
COPS7B-224ENST00000620578 MYO5BQ9ULV0 1848 aa21.34■■□□□ 1.01
COPS7B-224ENST00000620578 TMEM132EQ6IEE7 984 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms