RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 DHX29Q7Z478 1369 aaKnown RBP26.76■■□□□ 1.87
PSPC1-206ENST00000619300 ZNF326Q5BKZ1 582 aaKnown RBP26.75■■□□□ 1.87
PSPC1-206ENST00000619300 SPATA31E1Q6ZUB1 1445 aa26.75■■□□□ 1.87
PSPC1-206ENST00000619300 ATP10AO60312 1499 aa26.74■■□□□ 1.87
PSPC1-206ENST00000619300 WASHC2AQ641Q2 1341 aa26.73■■□□□ 1.87
PSPC1-206ENST00000619300 DCAF11Q8TEB1 546 aa26.72■■□□□ 1.87
PSPC1-206ENST00000619300 RIMBP3CA6NJZ7 1639 aa26.72■■□□□ 1.87
PSPC1-206ENST00000619300 RIMBP3BA6NNM3 1639 aa26.72■■□□□ 1.87
PSPC1-206ENST00000619300 RIMBP3Q9UFD9 1639 aa26.72■■□□□ 1.87
PSPC1-206ENST00000619300 KIF3BO15066 747 aa26.71■■□□□ 1.87
PSPC1-206ENST00000619300 KDM2AQ9Y2K7 1162 aa26.7■■□□□ 1.87
PSPC1-206ENST00000619300 POGZQ7Z3K3 1410 aa26.7■■□□□ 1.86
PSPC1-206ENST00000619300 DEPDC5O75140 1603 aa26.69■■□□□ 1.86
PSPC1-206ENST00000619300 NEO1Q92859 1461 aa26.68■■□□□ 1.86
PSPC1-206ENST00000619300 KANK1Q14678 1352 aa26.68■■□□□ 1.86
PSPC1-206ENST00000619300 KIDINS220Q9ULH0 1771 aa26.67■■□□□ 1.86
PSPC1-206ENST00000619300 ANP32CO43423 234 aa26.67■■□□□ 1.86
PSPC1-206ENST00000619300 C11orf95C9JLR9 678 aaPredicted RBP26.66■■□□□ 1.86
PSPC1-206ENST00000619300 RALGAPBQ86X10 1494 aa26.66■■□□□ 1.86
PSPC1-206ENST00000619300 KDM5CP41229 1560 aa26.65■■□□□ 1.86
PSPC1-206ENST00000619300 EIF2AK4Q9P2K8 1649 aaKnown RBP26.65■■□□□ 1.86
PSPC1-206ENST00000619300 MLH3Q9UHC1 1453 aa26.65■■□□□ 1.86
PSPC1-206ENST00000619300 RGL3Q3MIN7 710 aa26.64■■□□□ 1.86
PSPC1-206ENST00000619300 VWDEQ8N2E2 1590 aa26.63■■□□□ 1.85
PSPC1-206ENST00000619300 USP47Q96K76 1375 aa26.62■■□□□ 1.85
PSPC1-206ENST00000619300 CCDC7Q96M83 1385 aa26.62■■□□□ 1.85
PSPC1-206ENST00000619300 A2MP01023 1474 aa26.61■■□□□ 1.85
PSPC1-206ENST00000619300 E9PCH4 1651 aa26.6■■□□□ 1.85
PSPC1-206ENST00000619300 GLI2P10070 1586 aa26.59■■□□□ 1.85
PSPC1-206ENST00000619300 PTPRTO14522 1441 aa26.59■■□□□ 1.85
PSPC1-206ENST00000619300 CARD11Q9BXL7 1154 aa26.59■■□□□ 1.85
PSPC1-206ENST00000619300 PRDM15P57071 1507 aaPredicted RBP26.58■■□□□ 1.85
PSPC1-206ENST00000619300 CCER2I3L3R5 266 aa26.58■■□□□ 1.85
PSPC1-206ENST00000619300 TET3O43151 1660 aa26.58■■□□□ 1.84
PSPC1-206ENST00000619300 MAP3K4Q9Y6R4 1608 aa26.57■■□□□ 1.84
PSPC1-206ENST00000619300 RAPGEF3O95398 923 aa26.57■■□□□ 1.84
PSPC1-206ENST00000619300 PRAG1Q86YV5 1406 aa26.57■■□□□ 1.84
PSPC1-206ENST00000619300 SCAF1Q9H7N4 1312 aaKnown RBP26.56■■□□□ 1.84
PSPC1-206ENST00000619300 MROH1Q8NDA8 1641 aa26.56■■□□□ 1.84
PSPC1-206ENST00000619300 HECW2Q9P2P5 1572 aa26.56■■□□□ 1.84
PSPC1-206ENST00000619300 KIF7Q2M1P5 1343 aa26.55■■□□□ 1.84
PSPC1-206ENST00000619300 TRPM2O94759 1503 aa26.54■■□□□ 1.84
PSPC1-206ENST00000619300 FAM69CQ0P6D2 419 aa26.53■■□□□ 1.84
PSPC1-206ENST00000619300 ROCK2O75116 1388 aaKnown RBP26.52■■□□□ 1.84
PSPC1-206ENST00000619300 CNTLNQ9NXG0 1405 aa26.52■■□□□ 1.84
PSPC1-206ENST00000619300 FRMPD1Q5SYB0 1578 aa26.49■■□□□ 1.83
PSPC1-206ENST00000619300 SPHKAPQ2M3C7 1700 aa26.48■■□□□ 1.83
PSPC1-206ENST00000619300 ARID4BQ4LE39 1312 aaPredicted RBP26.48■■□□□ 1.83
PSPC1-206ENST00000619300 RNF17Q9BXT8 1623 aaKnown RBP26.47■■□□□ 1.83
PSPC1-206ENST00000619300 LMTK2Q8IWU2 1503 aa26.47■■□□□ 1.83
PSPC1-206ENST00000619300 POLR1AO95602 1720 aaPredicted RBP26.46■■□□□ 1.83
PSPC1-206ENST00000619300 TRPM1Q7Z4N2 1603 aa26.45■■□□□ 1.83
PSPC1-206ENST00000619300 ABCA6Q8N139 1617 aa26.45■■□□□ 1.83
PSPC1-206ENST00000619300 ST20-MTHFSA0A0A6YYL1 179 aa26.44■■□□□ 1.82
PSPC1-206ENST00000619300 STAC3Q96MF2 364 aa26.44■■□□□ 1.82
PSPC1-206ENST00000619300 GPRASP1Q5JY77 1395 aa26.44■■□□□ 1.82
PSPC1-206ENST00000619300 NBPF1Q3BBV0 1214 aa26.44■■□□□ 1.82
PSPC1-206ENST00000619300 DIP2BQ9P265 1576 aa26.44■■□□□ 1.82
PSPC1-206ENST00000619300 EFCAB6Q5THR3 1501 aa26.44■■□□□ 1.82
PSPC1-206ENST00000619300 BCORL1Q5H9F3 1711 aa26.43■■□□□ 1.82
PSPC1-206ENST00000619300 GGT6Q6P531 493 aa26.43■■□□□ 1.82
PSPC1-206ENST00000619300 CLTCL1P53675 1640 aa26.43■■□□□ 1.82
PSPC1-206ENST00000619300 RICTORQ6R327 1708 aa26.41■■□□□ 1.82
PSPC1-206ENST00000619300 CEP152O94986 1710 aa26.4■■□□□ 1.82
PSPC1-206ENST00000619300 GTF3C3Q9Y5Q9 886 aa26.39■■□□□ 1.81
PSPC1-206ENST00000619300 DIP2CQ9Y2E4 1556 aa26.38■■□□□ 1.81
PSPC1-206ENST00000619300 PPRC1Q5VV67 1664 aaKnown RBP26.38■■□□□ 1.81
PSPC1-206ENST00000619300 WASHC2CQ9Y4E1 1318 aa26.36■■□□□ 1.81
PSPC1-206ENST00000619300 NEURL4Q96JN8 1562 aa26.36■■□□□ 1.81
PSPC1-206ENST00000619300 LAMC1P11047 1609 aa26.35■■□□□ 1.81
PSPC1-206ENST00000619300 POLR3GLQ9BT43 218 aa26.34■■□□□ 1.81
PSPC1-206ENST00000619300 YEATS2Q9ULM3 1422 aa26.34■■□□□ 1.81
PSPC1-206ENST00000619300 PRKRIP1Q9H875 184 aaPredicted RBP26.32■■□□□ 1.8
PSPC1-206ENST00000619300 NPATQ14207 1427 aa26.32■■□□□ 1.8
PSPC1-206ENST00000619300 ABCC3O15438 1527 aa26.31■■□□□ 1.8
PSPC1-206ENST00000619300 UGGT1Q9NYU2 1555 aa26.3■■□□□ 1.8
PSPC1-206ENST00000619300 MADDQ8WXG6 1647 aa26.29■■□□□ 1.8
PSPC1-206ENST00000619300 ZMYM4Q5VZL5 1548 aa26.28■■□□□ 1.8
PSPC1-206ENST00000619300 TSPOAP1O95153 1857 aa26.25■■□□□ 1.79
PSPC1-206ENST00000619300 TESK2Q96S53 571 aa26.24■■□□□ 1.79
PSPC1-206ENST00000619300 KIF1BO60333 1816 aa26.23■■□□□ 1.79
PSPC1-206ENST00000619300 MYOM2P54296 1465 aa26.2■■□□□ 1.78
PSPC1-206ENST00000619300 CAMSAP1Q5T5Y3 1602 aa26.2■■□□□ 1.78
PSPC1-206ENST00000619300 ARHGAP31Q2M1Z3 1444 aa26.2■■□□□ 1.78
PSPC1-206ENST00000619300 NOS1P29475 1434 aa26.19■■□□□ 1.78
PSPC1-206ENST00000619300 CHGAP10645 457 aaKnown RBP26.17■■□□□ 1.78
PSPC1-206ENST00000619300 ADGRB3O60242 1522 aa26.17■■□□□ 1.78
PSPC1-206ENST00000619300 ADGRF5Q8IZF2 1346 aa26.17■■□□□ 1.78
PSPC1-206ENST00000619300 TMF1P82094 1093 aa26.15■■□□□ 1.78
PSPC1-206ENST00000619300 CCDC184Q52MB2 194 aa26.15■■□□□ 1.78
PSPC1-206ENST00000619300 SCAF11Q99590 1463 aaKnown RBP26.15■■□□□ 1.78
PSPC1-206ENST00000619300 COL17A1Q9UMD9 1497 aaPredicted RBP26.15■■□□□ 1.78
PSPC1-206ENST00000619300 ZC3H13Q5T200 1668 aaKnown RBP26.14■■□□□ 1.78
PSPC1-206ENST00000619300 CFAP65Q6ZU64 1925 aaKnown RBP26.14■■□□□ 1.77
PSPC1-206ENST00000619300 MROH2AA6NES4 1674 aa26.13■■□□□ 1.77
PSPC1-206ENST00000619300 KIAA1210Q9ULL0 1709 aa26.13■■□□□ 1.77
PSPC1-206ENST00000619300 PELP1Q8IZL8 1130 aaKnown RBP26.13■■□□□ 1.77
PSPC1-206ENST00000619300 DISP3Q9P2K9 1392 aa26.13■■□□□ 1.77
PSPC1-206ENST00000619300 RPGRIP1LQ68CZ1 1315 aa26.13■■□□□ 1.77
PSPC1-206ENST00000619300 CFAP70Q5T0N1 1121 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms