RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 PLIN1O60240 522 aa23.44■■□□□ 1.34
CDH23-212ENST00000616684 GZF1Q9H116 711 aaPredicted RBP23.43■■□□□ 1.34
CDH23-212ENST00000616684 NGDNQ8NEJ9 315 aaKnown RBP23.43■■□□□ 1.34
CDH23-212ENST00000616684 LMOD3Q0VAK6 560 aa23.43■■□□□ 1.34
CDH23-212ENST00000616684 CSB-PGBD3P0DP91 1061 aa23.42■■□□□ 1.34
CDH23-212ENST00000616684 NUTM2FA1L443 756 aa23.42■■□□□ 1.34
CDH23-212ENST00000616684 HMMRO75330 724 aa23.41■■□□□ 1.34
CDH23-212ENST00000616684 EXOC6Q8TAG9 804 aa23.41■■□□□ 1.34
CDH23-212ENST00000616684 UACAQ9BZF9 1416 aa23.41■■□□□ 1.34
CDH23-212ENST00000616684 GOLGA6L6A8MZA4 724 aa23.41■■□□□ 1.34
CDH23-212ENST00000616684 NRDCO43847 1150 aa23.41■■□□□ 1.34
CDH23-212ENST00000616684 SLC4A10Q6U841 1118 aa23.41■■□□□ 1.34
CDH23-212ENST00000616684 EID1Q9Y6B2 187 aa23.41■■□□□ 1.34
CDH23-212ENST00000616684 RRP1P56182 461 aaKnown RBP23.4■■□□□ 1.34
CDH23-212ENST00000616684 VGFO15240 615 aaPredicted RBP23.4■■□□□ 1.34
CDH23-212ENST00000616684 BCL2L13Q9BXK5 485 aa23.4■■□□□ 1.34
CDH23-212ENST00000616684 MSNP26038 577 aaKnown RBP23.39■■□□□ 1.33
CDH23-212ENST00000616684 LRRC9Q6ZRR7 1453 aa23.38■■□□□ 1.33
CDH23-212ENST00000616684 AMPHP49418 695 aa23.38■■□□□ 1.33
CDH23-212ENST00000616684 CGNL1Q0VF96 1302 aa23.37■■□□□ 1.33
CDH23-212ENST00000616684 E9PSI1 815 aa23.37■■□□□ 1.33
CDH23-212ENST00000616684 APAF1O14727 1248 aa23.37■■□□□ 1.33
CDH23-212ENST00000616684 CENPQQ7L2Z9 268 aaPredicted RBP23.37■■□□□ 1.33
CDH23-212ENST00000616684 ZNF330Q9Y3S2 320 aaPredicted RBP23.35■■□□□ 1.33
CDH23-212ENST00000616684 EVC2Q86UK5 1308 aa23.35■■□□□ 1.33
CDH23-212ENST00000616684 PDE4AP27815 886 aa23.35■■□□□ 1.33
CDH23-212ENST00000616684 KIF7Q2M1P5 1343 aa23.34■■□□□ 1.33
CDH23-212ENST00000616684 CCDC7Q96M83 1385 aa23.34■■□□□ 1.33
CDH23-212ENST00000616684 ELL2O00472 640 aaPredicted RBP23.34■■□□□ 1.33
CDH23-212ENST00000616684 PTMSP20962 102 aa23.34■■□□□ 1.33
CDH23-212ENST00000616684 TRIM6-TRIM34B2RNG4 842 aa23.34■■□□□ 1.33
CDH23-212ENST00000616684 CRBNQ96SW2 442 aa23.34■■□□□ 1.33
CDH23-212ENST00000616684 NCAPD3P42695 1498 aa23.33■■□□□ 1.33
CDH23-212ENST00000616684 LTV1Q96GA3 475 aaPredicted RBP23.33■■□□□ 1.32
CDH23-212ENST00000616684 TULP1O00294 542 aaPredicted RBP23.31■■□□□ 1.32
CDH23-212ENST00000616684 HDAC5Q9UQL6 1122 aa23.31■■□□□ 1.32
CDH23-212ENST00000616684 COG6Q9Y2V7 657 aa23.3■■□□□ 1.32
CDH23-212ENST00000616684 CUX1P39880 1505 aa23.3■■□□□ 1.32
CDH23-212ENST00000616684 ZKSCAN2Q63HK3 967 aa23.29■■□□□ 1.32
CDH23-212ENST00000616684 MINK1Q8N4C8 1332 aaPredicted RBP23.29■■□□□ 1.32
CDH23-212ENST00000616684 CHAF1AQ13111 956 aaPredicted RBP23.29■■□□□ 1.32
CDH23-212ENST00000616684 FAM161AQ3B820 660 aa23.29■■□□□ 1.32
CDH23-212ENST00000616684 DRC7Q8IY82 874 aa23.28■■□□□ 1.32
CDH23-212ENST00000616684 CASKIN1Q8WXD9 1431 aa23.27■■□□□ 1.32
CDH23-212ENST00000616684 ARAP1Q96P48 1450 aa23.27■■□□□ 1.32
CDH23-212ENST00000616684 COG3Q96JB2 828 aa23.26■■□□□ 1.31
CDH23-212ENST00000616684 ANKRD50Q9ULJ7 1429 aa23.26■■□□□ 1.31
CDH23-212ENST00000616684 NCOA2Q15596 1464 aa23.26■■□□□ 1.31
CDH23-212ENST00000616684 FOXD4L1Q9NU39 408 aa23.25■■□□□ 1.31
CDH23-212ENST00000616684 AQRO60306 1485 aaKnown RBP eCLIP23.25■■□□□ 1.31
CDH23-212ENST00000616684 GNL2Q13823 731 aaKnown RBP23.25■■□□□ 1.31
CDH23-212ENST00000616684 GPATCH3Q96I76 525 aa23.25■■□□□ 1.31
CDH23-212ENST00000616684 CHMP3Q9Y3E7 222 aa23.24■■□□□ 1.31
CDH23-212ENST00000616684 GOLGA6L3A6NEY3 463 aa23.23■■□□□ 1.31
CDH23-212ENST00000616684 NGEFQ8N5V2 710 aa23.23■■□□□ 1.31
CDH23-212ENST00000616684 WASHC2AQ641Q2 1341 aa23.22■■□□□ 1.31
CDH23-212ENST00000616684 GORABQ5T7V8 394 aa23.22■■□□□ 1.31
CDH23-212ENST00000616684 SYAP1Q96A49 352 aaPredicted RBP23.22■■□□□ 1.31
CDH23-212ENST00000616684 CNTLNQ9NXG0 1405 aa23.21■■□□□ 1.31
CDH23-212ENST00000616684 SLC4A3P48751 1232 aa23.21■■□□□ 1.31
CDH23-212ENST00000616684 ANKRD45Q5TZF3 282 aa23.21■■□□□ 1.31
CDH23-212ENST00000616684 FYCO1Q9BQS8 1478 aa23.21■■□□□ 1.31
CDH23-212ENST00000616684 NOL8Q76FK4 1167 aaKnown RBP23.21■■□□□ 1.31
CDH23-212ENST00000616684 STAC3Q96MF2 364 aa23.2■■□□□ 1.3
CDH23-212ENST00000616684 ERICH3Q5RHP9 1530 aa23.19■■□□□ 1.3
CDH23-212ENST00000616684 RRBP1Q9P2E9 1410 aaKnown RBP23.18■■□□□ 1.3
CDH23-212ENST00000616684 HTATSF1O43719 755 aaKnown RBP23.18■■□□□ 1.3
CDH23-212ENST00000616684 ST18O60284 1047 aa23.18■■□□□ 1.3
CDH23-212ENST00000616684 CYB5RLQ6IPT4 315 aa23.18■■□□□ 1.3
CDH23-212ENST00000616684 DIAPH1O60610 1272 aaKnown RBP23.18■■□□□ 1.3
CDH23-212ENST00000616684 KIAA2012Q0VF49 1180 aa23.17■■□□□ 1.3
CDH23-212ENST00000616684 TAF7LQ5H9L4 462 aa23.16■■□□□ 1.3
CDH23-212ENST00000616684 USP35Q9P2H5 1018 aa23.16■■□□□ 1.3
CDH23-212ENST00000616684 SYNJ1O43426 1573 aa23.16■■□□□ 1.3
CDH23-212ENST00000616684 RIPK4P57078 832 aa23.14■■□□□ 1.29
CDH23-212ENST00000616684 MIA2Q96PC5 1412 aa23.14■■□□□ 1.29
CDH23-212ENST00000616684 DDX19BQ9UMR2 479 aa23.13■■□□□ 1.29
CDH23-212ENST00000616684 FANCIQ9NVI1 1328 aa23.13■■□□□ 1.29
CDH23-212ENST00000616684 ISY1Q9ULR0 285 aaKnown RBP23.13■■□□□ 1.29
CDH23-212ENST00000616684 OSCARQ8IYS5 282 aa23.12■■□□□ 1.29
CDH23-212ENST00000616684 DZIP1LQ8IYY4 767 aaKnown RBP23.12■■□□□ 1.29
CDH23-212ENST00000616684 RUNDC1Q96C34 613 aa23.12■■□□□ 1.29
CDH23-212ENST00000616684 CFTRP13569 1480 aa23.12■■□□□ 1.29
CDH23-212ENST00000616684 HSP90B1P14625 803 aaKnown RBP23.1■■□□□ 1.29
CDH23-212ENST00000616684 RILPL2Q969X0 211 aa23.1■■□□□ 1.29
CDH23-212ENST00000616684 PRXQ9BXM0 1461 aa23.09■■□□□ 1.29
CDH23-212ENST00000616684 TEFQ10587 303 aa23.08■■□□□ 1.29
CDH23-212ENST00000616684 PRDM2Q13029 1718 aa23.08■■□□□ 1.28
CDH23-212ENST00000616684 AFAP1Q8N556 730 aa23.07■■□□□ 1.28
CDH23-212ENST00000616684 BRD4O60885 1362 aaPredicted RBP23.07■■□□□ 1.28
CDH23-212ENST00000616684 FOXD4L5Q5VV16 416 aaPredicted RBP23.07■■□□□ 1.28
CDH23-212ENST00000616684 FOXD4L4Q8WXT5 416 aaPredicted RBP23.07■■□□□ 1.28
CDH23-212ENST00000616684 GRIN2BQ13224 1484 aa23.06■■□□□ 1.28
CDH23-212ENST00000616684 ADAMTS8Q9UP79 889 aa23.06■■□□□ 1.28
CDH23-212ENST00000616684 DDX11L8A8MPP1 907 aa23.06■■□□□ 1.28
CDH23-212ENST00000616684 API5Q9BZZ5 524 aaKnown RBP23.06■■□□□ 1.28
CDH23-212ENST00000616684 KIF16BQ96L93 1317 aa23.06■■□□□ 1.28
CDH23-212ENST00000616684 CSPP1Q1MSJ5 1256 aa23.05■■□□□ 1.28
CDH23-212ENST00000616684 TMEM132EQ6IEE7 984 aa23.05■■□□□ 1.28
CDH23-212ENST00000616684 GGNBP2Q9H3C7 697 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms