RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 RBM33Q96EV2 1170 aaKnown RBP7.31□□□□□ -1.24
HMGB1P50-201ENST00000605814 EPAS1Q99814 870 aa7.31□□□□□ -1.24
HMGB1P50-201ENST00000605814 COL9A1P20849 921 aa7.29□□□□□ -1.24
HMGB1P50-201ENST00000605814 LAPTM4BQ86VI4 370 aa7.28□□□□□ -1.24
HMGB1P50-201ENST00000605814 BBXQ8WY36 941 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P50-201ENST00000605814 DDX12PQ92771 950 aa7.28□□□□□ -1.24
HMGB1P50-201ENST00000605814 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P50-201ENST00000605814 KIAA1468Q9P260 1216 aa7.28□□□□□ -1.24
HMGB1P50-201ENST00000605814 RGS20O76081 388 aa7.27□□□□□ -1.25
HMGB1P50-201ENST00000605814 BCAMP50895 628 aa7.27□□□□□ -1.25
HMGB1P50-201ENST00000605814 NBR1Q14596 966 aa7.27□□□□□ -1.25
HMGB1P50-201ENST00000605814 A0A0G2JS52 829 aa7.26□□□□□ -1.25
HMGB1P50-201ENST00000605814 MAP3K7O43318 606 aa7.26□□□□□ -1.25
HMGB1P50-201ENST00000605814 C6orf132Q5T0Z8 1188 aa7.26□□□□□ -1.25
HMGB1P50-201ENST00000605814 SEPT9Q9UHD8 586 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P50-201ENST00000605814 CAMK2BQ13554 666 aa7.25□□□□□ -1.25
HMGB1P50-201ENST00000605814 IFFO2Q5TF58 517 aa7.25□□□□□ -1.25
HMGB1P50-201ENST00000605814 NYAP1Q6ZVC0 841 aa7.25□□□□□ -1.25
HMGB1P50-201ENST00000605814 SPRYD3Q8NCJ5 442 aa7.25□□□□□ -1.25
HMGB1P50-201ENST00000605814 ZFRQ96KR1 1074 aaKnown RBP7.25□□□□□ -1.25
HMGB1P50-201ENST00000605814 IRX2Q9BZI1 471 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P50-201ENST00000605814 WDR70Q9NW82 654 aa7.25□□□□□ -1.25
HMGB1P50-201ENST00000605814 SOWAHBA6NEL2 793 aa7.24□□□□□ -1.25
HMGB1P50-201ENST00000605814 TRIM6-TRIM34B2RNG4 842 aa7.24□□□□□ -1.25
HMGB1P50-201ENST00000605814 LRCH3Q96II8 777 aa7.24□□□□□ -1.25
HMGB1P50-201ENST00000605814 ONECUT3O60422 494 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P50-201ENST00000605814 FAM98CQ17RN3 349 aaKnown RBP7.23□□□□□ -1.25
HMGB1P50-201ENST00000605814 PACS2Q86VP3 889 aa7.23□□□□□ -1.25
HMGB1P50-201ENST00000605814 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P50-201ENST00000605814 HPS5Q9UPZ3 1129 aa7.21□□□□□ -1.26
HMGB1P50-201ENST00000605814 SPDYE16A6NNV3 312 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P50-201ENST00000605814 KCNC4Q03721 635 aa7.2□□□□□ -1.26
HMGB1P50-201ENST00000605814 EN1Q05925 392 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P50-201ENST00000605814 CFAP44Q96MT7 982 aa7.2□□□□□ -1.26
HMGB1P50-201ENST00000605814 WBP1LQ9NX94 342 aa7.2□□□□□ -1.26
HMGB1P50-201ENST00000605814 PDIA6Q15084 440 aa7.19□□□□□ -1.26
HMGB1P50-201ENST00000605814 TSR3Q9UJK0 312 aaKnown RBP7.19□□□□□ -1.26
HMGB1P50-201ENST00000605814 GRXCR2A6NFK2 248 aa7.18□□□□□ -1.26
HMGB1P50-201ENST00000605814 RNF40O75150 1001 aa7.18□□□□□ -1.26
HMGB1P50-201ENST00000605814 ITGBL1O95965 494 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P50-201ENST00000605814 E2F4Q16254 413 aa7.18□□□□□ -1.26
HMGB1P50-201ENST00000605814 TSR1Q2NL82 804 aaKnown RBP7.18□□□□□ -1.26
HMGB1P50-201ENST00000605814 AMER1Q5JTC6 1135 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P50-201ENST00000605814 PPP4CP60510 307 aa7.17□□□□□ -1.26
HMGB1P50-201ENST00000605814 PAXIP1Q6ZW49 1069 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P50-201ENST00000605814 NBPF26B4DH59 902 aa7.16□□□□□ -1.26
HMGB1P50-201ENST00000605814 HDGFP51858 240 aaKnown RBP7.16□□□□□ -1.26
HMGB1P50-201ENST00000605814 CERKQ8TCT0 537 aa7.16□□□□□ -1.26
HMGB1P50-201ENST00000605814 CDCA7LQ96GN5 454 aa7.14□□□□□ -1.27
HMGB1P50-201ENST00000605814 TSKSQ9UJT2 592 aa7.14□□□□□ -1.27
HMGB1P50-201ENST00000605814 SMAPO00193 183 aa7.13□□□□□ -1.27
HMGB1P50-201ENST00000605814 PRSS12P56730 875 aa7.13□□□□□ -1.27
HMGB1P50-201ENST00000605814 PNMA3Q9UL41 463 aa7.13□□□□□ -1.27
HMGB1P50-201ENST00000605814 SLC4A3P48751 1232 aa7.12□□□□□ -1.27
HMGB1P50-201ENST00000605814 Q6ZNB5 142 aa7.12□□□□□ -1.27
HMGB1P50-201ENST00000605814 SAMD7Q7Z3H4 446 aa7.12□□□□□ -1.27
HMGB1P50-201ENST00000605814 NECTIN2Q92692 538 aa7.09□□□□□ -1.27
HMGB1P50-201ENST00000605814 TATDN2Q93075 761 aa7.09□□□□□ -1.27
HMGB1P50-201ENST00000605814 NISCHQ9Y2I1 1504 aa7.09□□□□□ -1.27
HMGB1P50-201ENST00000605814 NUDT18Q6ZVK8 323 aa7.07□□□□□ -1.28
HMGB1P50-201ENST00000605814 CDHR5Q9HBB8 845 aa7.06□□□□□ -1.28
HMGB1P50-201ENST00000605814 IL21Q9HBE4 155 aa7.06□□□□□ -1.28
HMGB1P50-201ENST00000605814 LAPTM4AQ15012 233 aa7.05□□□□□ -1.28
HMGB1P50-201ENST00000605814 MTRQ99707 1265 aa7.05□□□□□ -1.28
HMGB1P50-201ENST00000605814 RBM27Q9P2N5 1060 aaKnown RBP7.05□□□□□ -1.28
HMGB1P50-201ENST00000605814 ARIH1Q9Y4X5 557 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P50-201ENST00000605814 OSBPP22059 807 aa7.04□□□□□ -1.28
HMGB1P50-201ENST00000605814 SLF2Q8IX21 1173 aa7.04□□□□□ -1.28
HMGB1P50-201ENST00000605814 RTN4Q9NQC3 1192 aaKnown RBP7.04□□□□□ -1.28
HMGB1P50-201ENST00000605814 FAM198AQ9UFP1 575 aa7.04□□□□□ -1.28
HMGB1P50-201ENST00000605814 GGCXP38435 758 aa7.03□□□□□ -1.28
HMGB1P50-201ENST00000605814 PRIM1P49642 420 aaKnown RBP7.03□□□□□ -1.28
HMGB1P50-201ENST00000605814 PADI6Q6TGC4 694 aa7.03□□□□□ -1.28
HMGB1P50-201ENST00000605814 GFRA3O60609 400 aa7.02□□□□□ -1.29
HMGB1P50-201ENST00000605814 TJAP1Q5JTD0 557 aa7.02□□□□□ -1.29
HMGB1P50-201ENST00000605814 PRKD2Q9BZL6 878 aa7.02□□□□□ -1.29
HMGB1P50-201ENST00000605814 SWT1Q5T5J6 900 aaKnown RBP7.01□□□□□ -1.29
HMGB1P50-201ENST00000605814 COPS2P61201 443 aa7□□□□□ -1.29
HMGB1P50-201ENST00000605814 PPP1R18Q6NYC8 613 aa7□□□□□ -1.29
HMGB1P50-201ENST00000605814 PRR14Q9BWN1 585 aa7□□□□□ -1.29
HMGB1P50-201ENST00000605814 APLP1P51693 650 aa6.99□□□□□ -1.29
HMGB1P50-201ENST00000605814 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.99□□□□□ -1.29
HMGB1P50-201ENST00000605814 C3orf80F5H4A9 247 aa6.98□□□□□ -1.29
HMGB1P50-201ENST00000605814 ZNF516Q92618 1163 aa6.97□□□□□ -1.29
HMGB1P50-201ENST00000605814 ARHGEF1Q92888 912 aaKnown RBP6.96□□□□□ -1.3
HMGB1P50-201ENST00000605814 PCDHB3Q9Y5E6 796 aa6.96□□□□□ -1.3
HMGB1P50-201ENST00000605814 V9GY48 417 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P50-201ENST00000605814 NUTM2FA1L443 756 aa6.95□□□□□ -1.3
HMGB1P50-201ENST00000605814 NRG2O14511 850 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P50-201ENST00000605814 RBM46Q8TBY0 533 aaKnown RBP6.95□□□□□ -1.3
HMGB1P50-201ENST00000605814 DNAJB2P25686 324 aa6.94□□□□□ -1.3
HMGB1P50-201ENST00000605814 TRAF7Q6Q0C0 670 aa6.94□□□□□ -1.3
HMGB1P50-201ENST00000605814 MLLT3P42568 568 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P50-201ENST00000605814 KMT5BQ4FZB7 885 aa6.93□□□□□ -1.3
HMGB1P50-201ENST00000605814 P3H3Q8IVL6 736 aa6.93□□□□□ -1.3
HMGB1P50-201ENST00000605814 TTC13Q8NBP0 860 aa6.93□□□□□ -1.3
HMGB1P50-201ENST00000605814 NKX2-3Q8TAU0 364 aa6.93□□□□□ -1.3
HMGB1P50-201ENST00000605814 NPDC1Q9NQX5 325 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P50-201ENST00000605814 PDZRN3Q9UPQ7 1066 aa6.93□□□□□ -1.3
HMGB1P50-201ENST00000605814 ZPR1O75312 459 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms