RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	DDX10	Q13206	875 aa	Known RBP	5.15	□□□□□ -1.59
KCNMA1-223	ENST00000604624	HSP90AB3P	Q58FF7	597 aa		5.14	□□□□□ -1.59
KCNMA1-223	ENST00000604624	EHBP1L1	Q8N3D4	1523 aa		5.14	□□□□□ -1.59
KCNMA1-223	ENST00000604624	HSCB	Q8IWL3	235 aa		5.14	□□□□□ -1.59
KCNMA1-223	ENST00000604624	KIAA1107	Q9UPP5	1409 aa		5.14	□□□□□ -1.59
KCNMA1-223	ENST00000604624	NOP58	Q9Y2X3	529 aa	Known RBP	5.14	□□□□□ -1.59
KCNMA1-223	ENST00000604624	ROCK1	Q13464	1354 aa		5.14	□□□□□ -1.59
KCNMA1-223	ENST00000604624	DYDC1	Q8WWB3	177 aa		5.14	□□□□□ -1.59
KCNMA1-223	ENST00000604624	SHANK2	Q9UPX8	1470 aa		5.14	□□□□□ -1.59
KCNMA1-223	ENST00000604624	DEK	P35659	375 aa	Known RBP	5.14	□□□□□ -1.59
KCNMA1-223	ENST00000604624	ADGRL2	O95490	1459 aa		5.14	□□□□□ -1.59
KCNMA1-223	ENST00000604624	MRS2	Q9HD23	443 aa		5.14	□□□□□ -1.59
KCNMA1-223	ENST00000604624	CCDC191	Q8NCU4	936 aa		5.13	□□□□□ -1.59
KCNMA1-223	ENST00000604624	NUP153	P49790	1475 aa	Known RBP	5.13	□□□□□ -1.59
KCNMA1-223	ENST00000604624		H0YHG0	523 aa		5.12	□□□□□ -1.59
KCNMA1-223	ENST00000604624	GPS2	Q13227	327 aa		5.12	□□□□□ -1.59
KCNMA1-223	ENST00000604624	CCDC70	Q6NSX1	233 aa		5.12	□□□□□ -1.59
KCNMA1-223	ENST00000604624	LMOD2	Q6P5Q4	547 aa		5.12	□□□□□ -1.59
KCNMA1-223	ENST00000604624	NEUROD2	Q15784	382 aa		5.12	□□□□□ -1.59
KCNMA1-223	ENST00000604624	FAM135A	Q9P2D6	1515 aa		5.12	□□□□□ -1.59
KCNMA1-223	ENST00000604624	NEFH	P12036	1026 aa		5.12	□□□□□ -1.59
KCNMA1-223	ENST00000604624	ABCC2	Q92887	1545 aa		5.12	□□□□□ -1.59
KCNMA1-223	ENST00000604624	MAPK8IP2	Q13387	824 aa	Predicted RBP	5.12	□□□□□ -1.59
KCNMA1-223	ENST00000604624	FRAT1	Q92837	279 aa	Predicted RBP	5.12	□□□□□ -1.59
KCNMA1-223	ENST00000604624	HFM1	A2PYH4	1435 aa		5.12	□□□□□ -1.59
KCNMA1-223	ENST00000604624	TRO	Q12816	1431 aa	Predicted RBP	5.12	□□□□□ -1.59
KCNMA1-223	ENST00000604624	RDX	P35241	583 aa	Known RBP	5.11	□□□□□ -1.59
KCNMA1-223	ENST00000604624	MYOM3	Q5VTT5	1437 aa		5.11	□□□□□ -1.59
KCNMA1-223	ENST00000604624	ABCC10	Q5T3U5	1492 aa		5.11	□□□□□ -1.59
KCNMA1-223	ENST00000604624	NOM1	Q5C9Z4	860 aa	Known RBP	5.11	□□□□□ -1.59
KCNMA1-223	ENST00000604624	TSR1	Q2NL82	804 aa	Known RBP	5.11	□□□□□ -1.59
KCNMA1-223	ENST00000604624	TONSL	Q96HA7	1378 aa		5.11	□□□□□ -1.59
KCNMA1-223	ENST00000604624	MCC	P23508	829 aa		5.11	□□□□□ -1.59
KCNMA1-223	ENST00000604624	BCL11B	Q9C0K0	894 aa	Predicted RBP	5.11	□□□□□ -1.59
KCNMA1-223	ENST00000604624	PHLDB1	Q86UU1	1377 aa		5.11	□□□□□ -1.59
KCNMA1-223	ENST00000604624	SKIDA1	Q1XH10	827 aa		5.11	□□□□□ -1.59
KCNMA1-223	ENST00000604624	ZNF592	Q92610	1267 aa		5.1	□□□□□ -1.59
KCNMA1-223	ENST00000604624	EPRS	P07814	1512 aa	Known RBP	5.1	□□□□□ -1.59
KCNMA1-223	ENST00000604624	CCDC34	Q96HJ3	373 aa		5.1	□□□□□ -1.59
KCNMA1-223	ENST00000604624	ATP10A	O60312	1499 aa		5.1	□□□□□ -1.59
KCNMA1-223	ENST00000604624	CFAP43	Q8NDM7	1665 aa		5.1	□□□□□ -1.59
KCNMA1-223	ENST00000604624	TEX35	Q5T0J7	233 aa		5.1	□□□□□ -1.59
KCNMA1-223	ENST00000604624	PAF1	Q8N7H5	531 aa		5.1	□□□□□ -1.59
KCNMA1-223	ENST00000604624	CEP170	Q5SW79	1584 aa		5.1	□□□□□ -1.59
KCNMA1-223	ENST00000604624	SYAP1	Q96A49	352 aa	Predicted RBP	5.1	□□□□□ -1.59
KCNMA1-223	ENST00000604624	KDM2A	Q9Y2K7	1162 aa		5.1	□□□□□ -1.59
KCNMA1-223	ENST00000604624	UACA	Q9BZF9	1416 aa		5.1	□□□□□ -1.59
KCNMA1-223	ENST00000604624	TPD52L1	Q16890	204 aa	Predicted RBP	5.09	□□□□□ -1.59
KCNMA1-223	ENST00000604624	RUFY1	Q96T51	708 aa		5.09	□□□□□ -1.59
KCNMA1-223	ENST00000604624	HECW1	Q76N89	1606 aa		5.09	□□□□□ -1.59
KCNMA1-223	ENST00000604624	ADCY10	Q96PN6	1610 aa		5.09	□□□□□ -1.59
KCNMA1-223	ENST00000604624	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	5.09	□□□□□ -1.59
KCNMA1-223	ENST00000604624	PTPRG	P23470	1445 aa		5.09	□□□□□ -1.59
KCNMA1-223	ENST00000604624	TCEAL9	Q9UHQ7	104 aa		5.09	□□□□□ -1.59
KCNMA1-223	ENST00000604624	RSPH4A	Q5TD94	716 aa		5.09	□□□□□ -1.59
KCNMA1-223	ENST00000604624	APBB1	O00213	710 aa		5.09	□□□□□ -1.59
KCNMA1-223	ENST00000604624	ODF2	Q5BJF6	829 aa		5.08	□□□□□ -1.6
KCNMA1-223	ENST00000604624	KIAA1211	Q6ZU35	1233 aa		5.08	□□□□□ -1.6
KCNMA1-223	ENST00000604624	CCAR1	Q8IX12	1150 aa	Known RBP	5.08	□□□□□ -1.6
KCNMA1-223	ENST00000604624	CCDC97	Q96F63	343 aa	Predicted RBP	5.08	□□□□□ -1.6
KCNMA1-223	ENST00000604624	SLK	Q9H2G2	1235 aa	Predicted RBP	5.08	□□□□□ -1.6
KCNMA1-223	ENST00000604624	MAGI2	Q86UL8	1455 aa		5.08	□□□□□ -1.6
KCNMA1-223	ENST00000604624	NEURL4	Q96JN8	1562 aa		5.08	□□□□□ -1.6
KCNMA1-223	ENST00000604624	RTEL1-TNFRSF6B	F6WH68	1400 aa		5.08	□□□□□ -1.6
KCNMA1-223	ENST00000604624	FGD6	Q6ZV73	1430 aa		5.08	□□□□□ -1.6
KCNMA1-223	ENST00000604624	RBM25	P49756	843 aa	Known RBP	5.08	□□□□□ -1.6
KCNMA1-223	ENST00000604624	GOLGA6L3	A6NEY3	463 aa		5.08	□□□□□ -1.6
KCNMA1-223	ENST00000604624	CLASRP	Q8N2M8	674 aa	Known RBP	5.08	□□□□□ -1.6
KCNMA1-223	ENST00000604624	PLEKHH2	Q8IVE3	1493 aa		5.08	□□□□□ -1.6
KCNMA1-223	ENST00000604624	PODXL2	Q9NZ53	605 aa		5.08	□□□□□ -1.6
KCNMA1-223	ENST00000604624	CALD1	Q05682	793 aa	Known RBP	5.08	□□□□□ -1.6
KCNMA1-223	ENST00000604624	SEPT11	Q9NVA2	429 aa	Known RBP	5.08	□□□□□ -1.6
KCNMA1-223	ENST00000604624	MARCH6	O60337	910 aa		5.07	□□□□□ -1.6
KCNMA1-223	ENST00000604624	ZNF330	Q9Y3S2	320 aa	Predicted RBP	5.07	□□□□□ -1.6
KCNMA1-223	ENST00000604624	KDM5D	Q9BY66	1539 aa		5.07	□□□□□ -1.6
KCNMA1-223	ENST00000604624	HIRIP3	Q9BW71	556 aa	Predicted RBP	5.07	□□□□□ -1.6
KCNMA1-223	ENST00000604624	CT47A1	Q5JQC4	288 aa	Predicted RBP	5.07	□□□□□ -1.6
KCNMA1-223	ENST00000604624	PPP4R2	Q9NY27	417 aa		5.07	□□□□□ -1.6
KCNMA1-223	ENST00000604624	MYO10	Q9HD67	2058 aa		5.07	□□□□□ -1.6
KCNMA1-223	ENST00000604624	NEXN	Q0ZGT2	675 aa		5.07	□□□□□ -1.6
KCNMA1-223	ENST00000604624	ZFYVE27	Q5T4F4	411 aa		5.07	□□□□□ -1.6
KCNMA1-223	ENST00000604624	TMX4	Q9H1E5	349 aa	Predicted RBP	5.07	□□□□□ -1.6
KCNMA1-223	ENST00000604624	MAPKBP1	O60336	1514 aa		5.07	□□□□□ -1.6
KCNMA1-223	ENST00000604624	NF2	P35240	595 aa		5.07	□□□□□ -1.6
KCNMA1-223	ENST00000604624	HOMER1	Q86YM7	354 aa		5.07	□□□□□ -1.6
KCNMA1-223	ENST00000604624	FAM13B	Q9NYF5	915 aa		5.07	□□□□□ -1.6
KCNMA1-223	ENST00000604624	GBP4	Q96PP9	640 aa		5.06	□□□□□ -1.6
KCNMA1-223	ENST00000604624	MBD5	Q9P267	1494 aa		5.06	□□□□□ -1.6
KCNMA1-223	ENST00000604624	DCTN1	Q14203	1278 aa		5.06	□□□□□ -1.6
KCNMA1-223	ENST00000604624	PCMTD1	Q96MG8	357 aa	Predicted RBP	5.06	□□□□□ -1.6
KCNMA1-223	ENST00000604624	CCNB3	Q8WWL7	1395 aa		5.06	□□□□□ -1.6
KCNMA1-223	ENST00000604624	NCOA2	Q15596	1464 aa		5.06	□□□□□ -1.6
KCNMA1-223	ENST00000604624	NAP1L1	P55209	391 aa	Known RBP	5.06	□□□□□ -1.6
KCNMA1-223	ENST00000604624	ANKRD62	A6NC57	917 aa		5.06	□□□□□ -1.6
KCNMA1-223	ENST00000604624	RAD21	O60216	631 aa		5.06	□□□□□ -1.6
KCNMA1-223	ENST00000604624	MAST1	Q9Y2H9	1570 aa		5.05	□□□□□ -1.6
KCNMA1-223	ENST00000604624		G3V3G9	751 aa		5.05	□□□□□ -1.6
KCNMA1-223	ENST00000604624	DCAF8	Q5TAQ9	597 aa		5.05	□□□□□ -1.6
KCNMA1-223	ENST00000604624	IPO7	O95373	1038 aa	Known RBP	5.05	□□□□□ -1.6
KCNMA1-223	ENST00000604624	SUPT16H	Q9Y5B9	1047 aa	Known RBP	5.05	□□□□□ -1.6

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