RNA–Protein interactions for RNA: ENST00000603353.1

AC006254.3-201, humanhuman

BASIC

Gene AC006254.3, Length 884 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006254.3-201ENST00000603353 CAMK2BQ13554 666 aa7.56□□□□□ -1.2
AC006254.3-201ENST00000603353 ZBED2Q9BTP6 218 aa7.56□□□□□ -1.2
AC006254.3-201ENST00000603353 BHMG1C9JSJ3 638 aaPredicted RBP7.55□□□□□ -1.2
AC006254.3-201ENST00000603353 PCDHGA10Q9Y5H3 936 aa7.54□□□□□ -1.2
AC006254.3-201ENST00000603353 PHF14O94880 888 aa7.51□□□□□ -1.21
AC006254.3-201ENST00000603353 DPYSL4O14531 572 aa7.5□□□□□ -1.21
AC006254.3-201ENST00000603353 RGS20O76081 388 aa7.5□□□□□ -1.21
AC006254.3-201ENST00000603353 PPP1R3GB7ZBB8 358 aa7.49□□□□□ -1.21
AC006254.3-201ENST00000603353 COL9A1P20849 921 aa7.49□□□□□ -1.21
AC006254.3-201ENST00000603353 TYW1BQ6NUM6 668 aa7.49□□□□□ -1.21
AC006254.3-201ENST00000603353 FBXW7Q969H0 707 aa7.49□□□□□ -1.21
AC006254.3-201ENST00000603353 PTPN5P54829 565 aa7.48□□□□□ -1.21
AC006254.3-201ENST00000603353 THSD4Q6ZMP0 1018 aa7.47□□□□□ -1.21
AC006254.3-201ENST00000603353 MRPL50Q8N5N7 158 aaKnown RBP7.47□□□□□ -1.21
AC006254.3-201ENST00000603353 PROX2Q3B8N5 592 aa7.46□□□□□ -1.22
AC006254.3-201ENST00000603353 IRX2Q9BZI1 471 aaPredicted RBP7.46□□□□□ -1.22
AC006254.3-201ENST00000603353 GOLGA8CPA6NN73 597 aa7.45□□□□□ -1.22
AC006254.3-201ENST00000603353 IFFO2Q5TF58 517 aa7.45□□□□□ -1.22
AC006254.3-201ENST00000603353 WNT2BQ93097 391 aa7.45□□□□□ -1.22
AC006254.3-201ENST00000603353 EPAS1Q99814 870 aa7.45□□□□□ -1.22
AC006254.3-201ENST00000603353 NBPF3Q9H094 633 aa7.45□□□□□ -1.22
AC006254.3-201ENST00000603353 RABGEF1Q9UJ41 708 aa7.45□□□□□ -1.22
AC006254.3-201ENST00000603353 PDIA6Q15084 440 aa7.43□□□□□ -1.22
AC006254.3-201ENST00000603353 C6orf132Q5T0Z8 1188 aa7.43□□□□□ -1.22
AC006254.3-201ENST00000603353 DDX12PQ92771 950 aa7.42□□□□□ -1.22
AC006254.3-201ENST00000603353 TIMELESSQ9UNS1 1208 aa7.42□□□□□ -1.22
AC006254.3-201ENST00000603353 A0A0G2JS52 829 aa7.41□□□□□ -1.22
AC006254.3-201ENST00000603353 KCNV2Q8TDN2 545 aa7.41□□□□□ -1.22
AC006254.3-201ENST00000603353 ONECUT3O60422 494 aaPredicted RBP7.4□□□□□ -1.22
AC006254.3-201ENST00000603353 P3H3Q8IVL6 736 aa7.4□□□□□ -1.22
AC006254.3-201ENST00000603353 KIAA1468Q9P260 1216 aa7.4□□□□□ -1.22
AC006254.3-201ENST00000603353 ARIH1Q9Y4X5 557 aaPredicted RBP7.4□□□□□ -1.22
AC006254.3-201ENST00000603353 EN1Q05925 392 aaPredicted RBP7.39□□□□□ -1.23
AC006254.3-201ENST00000603353 LAPTM4BQ86VI4 370 aa7.39□□□□□ -1.23
AC006254.3-201ENST00000603353 RBM33Q96EV2 1170 aaKnown RBP7.39□□□□□ -1.23
AC006254.3-201ENST00000603353 SPDYE16A6NNV3 312 aaPredicted RBP7.38□□□□□ -1.23
AC006254.3-201ENST00000603353 TRIM6-TRIM34B2RNG4 842 aa7.38□□□□□ -1.23
AC006254.3-201ENST00000603353 TULP1O00294 542 aaPredicted RBP7.38□□□□□ -1.23
AC006254.3-201ENST00000603353 E2F4Q16254 413 aa7.38□□□□□ -1.23
AC006254.3-201ENST00000603353 TSR1Q2NL82 804 aaKnown RBP7.37□□□□□ -1.23
AC006254.3-201ENST00000603353 ANKK1Q8NFD2 765 aa7.37□□□□□ -1.23
AC006254.3-201ENST00000603353 PRIM1P49642 420 aaKnown RBP7.36□□□□□ -1.23
AC006254.3-201ENST00000603353 BCAMP50895 628 aa7.36□□□□□ -1.23
AC006254.3-201ENST00000603353 ZFRQ96KR1 1074 aaKnown RBP7.36□□□□□ -1.23
AC006254.3-201ENST00000603353 SOWAHBA6NEL2 793 aa7.35□□□□□ -1.23
AC006254.3-201ENST00000603353 SEPT9Q9UHD8 586 aaPredicted RBP7.35□□□□□ -1.23
AC006254.3-201ENST00000603353 GTF3C3Q9Y5Q9 886 aa7.35□□□□□ -1.23
AC006254.3-201ENST00000603353 MAP3K7O43318 606 aa7.34□□□□□ -1.23
AC006254.3-201ENST00000603353 LMOD2Q6P5Q4 547 aa7.34□□□□□ -1.23
AC006254.3-201ENST00000603353 TSKSQ9UJT2 592 aa7.34□□□□□ -1.23
AC006254.3-201ENST00000603353 FAM98CQ17RN3 349 aaKnown RBP7.33□□□□□ -1.24
AC006254.3-201ENST00000603353 WDR70Q9NW82 654 aa7.33□□□□□ -1.24
AC006254.3-201ENST00000603353 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.32□□□□□ -1.24
AC006254.3-201ENST00000603353 ITGBL1O95965 494 aaPredicted RBP7.31□□□□□ -1.24
AC006254.3-201ENST00000603353 WBP1LQ9NX94 342 aa7.31□□□□□ -1.24
AC006254.3-201ENST00000603353 FAM198AQ9UFP1 575 aa7.31□□□□□ -1.24
AC006254.3-201ENST00000603353 GRXCR2A6NFK2 248 aa7.3□□□□□ -1.24
AC006254.3-201ENST00000603353 OSBPP22059 807 aa7.3□□□□□ -1.24
AC006254.3-201ENST00000603353 TMEM132AQ24JP5 1023 aa7.3□□□□□ -1.24
AC006254.3-201ENST00000603353 NYAP1Q6ZVC0 841 aa7.3□□□□□ -1.24
AC006254.3-201ENST00000603353 CDCA7LQ96GN5 454 aa7.3□□□□□ -1.24
AC006254.3-201ENST00000603353 PRSS12P56730 875 aa7.29□□□□□ -1.24
AC006254.3-201ENST00000603353 Q6ZNB5 142 aa7.29□□□□□ -1.24
AC006254.3-201ENST00000603353 PACS2Q86VP3 889 aa7.29□□□□□ -1.24
AC006254.3-201ENST00000603353 CERKQ8TCT0 537 aa7.28□□□□□ -1.24
AC006254.3-201ENST00000603353 CDHR5Q9HBB8 845 aa7.28□□□□□ -1.24
AC006254.3-201ENST00000603353 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.28□□□□□ -1.24
AC006254.3-201ENST00000603353 C3orf80F5H4A9 247 aa7.27□□□□□ -1.25
AC006254.3-201ENST00000603353 LRCH3Q96II8 777 aa7.27□□□□□ -1.25
AC006254.3-201ENST00000603353 TSR3Q9UJK0 312 aaKnown RBP7.27□□□□□ -1.25
AC006254.3-201ENST00000603353 SMAPO00193 183 aa7.26□□□□□ -1.25
AC006254.3-201ENST00000603353 HPS5Q9UPZ3 1129 aa7.26□□□□□ -1.25
AC006254.3-201ENST00000603353 ARHGEF1Q92888 912 aaKnown RBP7.24□□□□□ -1.25
AC006254.3-201ENST00000603353 TATDN2Q93075 761 aa7.24□□□□□ -1.25
AC006254.3-201ENST00000603353 RBM27Q9P2N5 1060 aaKnown RBP7.24□□□□□ -1.25
AC006254.3-201ENST00000603353 NBPF26B4DH59 902 aa7.23□□□□□ -1.25
AC006254.3-201ENST00000603353 BRPF1P55201 1214 aaPredicted RBP7.23□□□□□ -1.25
AC006254.3-201ENST00000603353 KCNC4Q03721 635 aa7.23□□□□□ -1.25
AC006254.3-201ENST00000603353 SAMD7Q7Z3H4 446 aa7.23□□□□□ -1.25
AC006254.3-201ENST00000603353 NPDC1Q9NQX5 325 aaPredicted RBP7.23□□□□□ -1.25
AC006254.3-201ENST00000603353 PNMA3Q9UL41 463 aa7.23□□□□□ -1.25
AC006254.3-201ENST00000603353 SEMA3EO15041 775 aa7.22□□□□□ -1.25
AC006254.3-201ENST00000603353 LAPTM4AQ15012 233 aa7.22□□□□□ -1.25
AC006254.3-201ENST00000603353 TTC13Q8NBP0 860 aa7.22□□□□□ -1.25
AC006254.3-201ENST00000603353 ZC3H15Q8WU90 426 aaKnown RBP7.22□□□□□ -1.25
AC006254.3-201ENST00000603353 TESPA1A2RU30 521 aaPredicted RBP7.21□□□□□ -1.26
AC006254.3-201ENST00000603353 PPP4CP60510 307 aa7.2□□□□□ -1.26
AC006254.3-201ENST00000603353 NUDT18Q6ZVK8 323 aa7.2□□□□□ -1.26
AC006254.3-201ENST00000603353 MLLT3P42568 568 aaPredicted RBP7.19□□□□□ -1.26
AC006254.3-201ENST00000603353 PADI6Q6TGC4 694 aa7.19□□□□□ -1.26
AC006254.3-201ENST00000603353 TJAP1Q5JTD0 557 aa7.17□□□□□ -1.26
AC006254.3-201ENST00000603353 SLC24A3Q9HC58 644 aa7.17□□□□□ -1.26
AC006254.3-201ENST00000603353 ERICH6Q7L0X2 663 aa7.16□□□□□ -1.26
AC006254.3-201ENST00000603353 C14orf37Q86TY3 774 aa7.15□□□□□ -1.26
AC006254.3-201ENST00000603353 EYA1Q99502 592 aa7.15□□□□□ -1.26
AC006254.3-201ENST00000603353 APLP1P51693 650 aa7.14□□□□□ -1.27
AC006254.3-201ENST00000603353 NEUROD2Q15784 382 aa7.14□□□□□ -1.27
AC006254.3-201ENST00000603353 SWT1Q5T5J6 900 aaKnown RBP7.14□□□□□ -1.27
AC006254.3-201ENST00000603353 MTRQ99707 1265 aa7.14□□□□□ -1.27
AC006254.3-201ENST00000603353 GFRA3O60609 400 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms