RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 BCAR3O75815 825 aa20.7■□□□□ 0.9
SYDE1-204ENST00000600440 IGHDP01880 384 aa20.7■□□□□ 0.9
SYDE1-204ENST00000600440 CANXP27824 592 aaKnown RBP20.7■□□□□ 0.9
SYDE1-204ENST00000600440 CCDC146Q8IYE0 955 aa20.7■□□□□ 0.9
SYDE1-204ENST00000600440 CDK13Q14004 1512 aaKnown RBP20.69■□□□□ 0.9
SYDE1-204ENST00000600440 USP19O94966 1318 aa20.69■□□□□ 0.9
SYDE1-204ENST00000600440 DAPK1P53355 1430 aa20.69■□□□□ 0.9
SYDE1-204ENST00000600440 PANK3Q9H999 370 aa20.69■□□□□ 0.9
SYDE1-204ENST00000600440 TCOF1Q13428 1488 aaKnown RBP20.68■□□□□ 0.9
SYDE1-204ENST00000600440 KDM5CP41229 1560 aa20.67■□□□□ 0.9
SYDE1-204ENST00000600440 CLCN1P35523 988 aa20.67■□□□□ 0.9
SYDE1-204ENST00000600440 DUSP27Q5VZP5 1158 aa20.67■□□□□ 0.9
SYDE1-204ENST00000600440 UPF2Q9HAU5 1272 aaKnown RBP20.66■□□□□ 0.9
SYDE1-204ENST00000600440 GOLGA2Q08379 1002 aa20.66■□□□□ 0.9
SYDE1-204ENST00000600440 ABCC5O15440 1437 aa20.65■□□□□ 0.9
SYDE1-204ENST00000600440 PARD3Q8TEW0 1356 aa20.65■□□□□ 0.9
SYDE1-204ENST00000600440 CTTNBP2Q8WZ74 1663 aa20.64■□□□□ 0.89
SYDE1-204ENST00000600440 NBPF1Q3BBV0 1214 aa20.63■□□□□ 0.89
SYDE1-204ENST00000600440 ARID3AQ99856 593 aa20.63■□□□□ 0.89
SYDE1-204ENST00000600440 MYH16Q9H6N6 1097 aa20.63■□□□□ 0.89
SYDE1-204ENST00000600440 COG6Q9Y2V7 657 aa20.63■□□□□ 0.89
SYDE1-204ENST00000600440 PLEKHH1Q9ULM0 1364 aa20.63■□□□□ 0.89
SYDE1-204ENST00000600440 TRIM44Q96DX7 344 aaPredicted RBP20.62■□□□□ 0.89
SYDE1-204ENST00000600440 TBC1D2Q9BYX2 928 aa20.62■□□□□ 0.89
SYDE1-204ENST00000600440 KIAA1107Q9UPP5 1409 aa20.62■□□□□ 0.89
SYDE1-204ENST00000600440 PZPP20742 1482 aa20.61■□□□□ 0.89
SYDE1-204ENST00000600440 PER1O15534 1290 aaPredicted RBP20.6■□□□□ 0.89
SYDE1-204ENST00000600440 TRAK2O60296 914 aa20.6■□□□□ 0.89
SYDE1-204ENST00000600440 MCM4P33991 863 aa20.6■□□□□ 0.89
SYDE1-204ENST00000600440 PANK1Q8TE04 598 aa20.6■□□□□ 0.89
SYDE1-204ENST00000600440 PLEKHG5O94827 1062 aa20.59■□□□□ 0.89
SYDE1-204ENST00000600440 ESPNB1AK53 854 aa20.59■□□□□ 0.89
SYDE1-204ENST00000600440 PODXL2Q9NZ53 605 aa20.59■□□□□ 0.89
SYDE1-204ENST00000600440 CFDP1Q9UEE9 299 aaPredicted RBP20.59■□□□□ 0.89
SYDE1-204ENST00000600440 NUP155O75694 1391 aa20.59■□□□□ 0.89
SYDE1-204ENST00000600440 MBD5Q9P267 1494 aa20.58■□□□□ 0.89
SYDE1-204ENST00000600440 ANTXR1Q9H6X2 564 aa20.58■□□□□ 0.89
SYDE1-204ENST00000600440 SPINK5Q9NQ38 1064 aaPredicted RBP20.58■□□□□ 0.88
SYDE1-204ENST00000600440 ARHGEF11O15085 1522 aa20.58■□□□□ 0.88
SYDE1-204ENST00000600440 ERBB4Q15303 1308 aa20.58■□□□□ 0.88
SYDE1-204ENST00000600440 POLA1P09884 1462 aaPredicted RBP20.57■□□□□ 0.88
SYDE1-204ENST00000600440 THOC2Q8NI27 1593 aaKnown RBP20.57■□□□□ 0.88
SYDE1-204ENST00000600440 KIF14Q15058 1648 aa20.56■□□□□ 0.88
SYDE1-204ENST00000600440 ROCK1Q13464 1354 aa20.56■□□□□ 0.88
SYDE1-204ENST00000600440 EPRSP07814 1512 aaKnown RBP20.56■□□□□ 0.88
SYDE1-204ENST00000600440 FANCD2Q9BXW9 1451 aa20.56■□□□□ 0.88
SYDE1-204ENST00000600440 RALGAPBQ86X10 1494 aa20.54■□□□□ 0.88
SYDE1-204ENST00000600440 GRPEL1Q9HAV7 217 aa20.54■□□□□ 0.88
SYDE1-204ENST00000600440 APAF1O14727 1248 aa20.54■□□□□ 0.88
SYDE1-204ENST00000600440 RBM10P98175 930 aaKnown RBP20.54■□□□□ 0.88
SYDE1-204ENST00000600440 FSD2A1L4K1 749 aa20.53■□□□□ 0.88
SYDE1-204ENST00000600440 MRE11P49959 708 aa20.53■□□□□ 0.88
SYDE1-204ENST00000600440 BLMP54132 1417 aaPredicted RBP20.53■□□□□ 0.88
SYDE1-204ENST00000600440 MFAP1P55081 439 aaKnown RBP20.52■□□□□ 0.88
SYDE1-204ENST00000600440 NEUROD2Q15784 382 aa20.52■□□□□ 0.88
SYDE1-204ENST00000600440 ABCA10Q8WWZ4 1543 aa20.52■□□□□ 0.88
SYDE1-204ENST00000600440 A0A0U1RQG5 324 aaPredicted RBP20.51■□□□□ 0.87
SYDE1-204ENST00000600440 BCL2L13Q9BXK5 485 aa20.5■□□□□ 0.87
SYDE1-204ENST00000600440 ZMYM4Q5VZL5 1548 aa20.5■□□□□ 0.87
SYDE1-204ENST00000600440 MAPK8IP3Q9UPT6 1336 aa20.5■□□□□ 0.87
SYDE1-204ENST00000600440 SLFN5Q08AF3 891 aa20.5■□□□□ 0.87
SYDE1-204ENST00000600440 CLUAP1Q96AJ1 413 aa20.5■□□□□ 0.87
SYDE1-204ENST00000600440 DISP3Q9P2K9 1392 aa20.5■□□□□ 0.87
SYDE1-204ENST00000600440 KNSTRNQ9Y448 316 aa20.5■□□□□ 0.87
SYDE1-204ENST00000600440 SAMD9Q5K651 1589 aa20.49■□□□□ 0.87
SYDE1-204ENST00000600440 TBC1D32Q96NH3 1257 aa20.47■□□□□ 0.87
SYDE1-204ENST00000600440 PPP2R1AP30153 589 aa20.47■□□□□ 0.87
SYDE1-204ENST00000600440 KIAA1211Q6ZU35 1233 aa20.47■□□□□ 0.87
SYDE1-204ENST00000600440 FOXD4L1Q9NU39 408 aa20.47■□□□□ 0.87
SYDE1-204ENST00000600440 DMRT2Q9Y5R5 561 aa20.47■□□□□ 0.87
SYDE1-204ENST00000600440 CUL7Q14999 1698 aa20.47■□□□□ 0.87
SYDE1-204ENST00000600440 NESP48681 1621 aa20.46■□□□□ 0.87
SYDE1-204ENST00000600440 CHMP5Q9NZZ3 219 aa20.45■□□□□ 0.86
SYDE1-204ENST00000600440 TNNQ9UQP3 1299 aa20.45■□□□□ 0.86
SYDE1-204ENST00000600440 CC2D2AQ9P2K1 1620 aa20.44■□□□□ 0.86
SYDE1-204ENST00000600440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.44■□□□□ 0.86
SYDE1-204ENST00000600440 PDZRN3Q9UPQ7 1066 aa20.44■□□□□ 0.86
SYDE1-204ENST00000600440 TOPBP1Q92547 1522 aa20.44■□□□□ 0.86
SYDE1-204ENST00000600440 KIAA0586Q9BVV6 1533 aa20.44■□□□□ 0.86
SYDE1-204ENST00000600440 TMF1P82094 1093 aa20.43■□□□□ 0.86
SYDE1-204ENST00000600440 FAM13BQ9NYF5 915 aa20.43■□□□□ 0.86
SYDE1-204ENST00000600440 EIF3AQ14152 1382 aaKnown RBP20.42■□□□□ 0.86
SYDE1-204ENST00000600440 UHRF1BP1Q6BDS2 1440 aa20.42■□□□□ 0.86
SYDE1-204ENST00000600440 CGNL1Q0VF96 1302 aa20.42■□□□□ 0.86
SYDE1-204ENST00000600440 ANKRD50Q9ULJ7 1429 aa20.42■□□□□ 0.86
SYDE1-204ENST00000600440 PRDM2Q13029 1718 aa20.41■□□□□ 0.86
SYDE1-204ENST00000600440 GAS2L3Q86XJ1 694 aa20.41■□□□□ 0.86
SYDE1-204ENST00000600440 CENPJQ9HC77 1338 aaPredicted RBP20.41■□□□□ 0.86
SYDE1-204ENST00000600440 PLEKHH2Q8IVE3 1493 aa20.41■□□□□ 0.86
SYDE1-204ENST00000600440 DNMT1P26358 1616 aaKnown RBP20.4■□□□□ 0.86
SYDE1-204ENST00000600440 C22orf23Q9BZE7 217 aa20.4■□□□□ 0.86
SYDE1-204ENST00000600440 HSCBQ8IWL3 235 aa20.4■□□□□ 0.86
SYDE1-204ENST00000600440 PCDHB15Q9Y5E8 787 aa20.4■□□□□ 0.86
SYDE1-204ENST00000600440 ANKRD30AQ9BXX3 1397 aa20.39■□□□□ 0.86
SYDE1-204ENST00000600440 RRP7AQ9Y3A4 280 aaKnown RBP20.39■□□□□ 0.85
SYDE1-204ENST00000600440 PDCL3Q9H2J4 239 aa20.39■□□□□ 0.85
SYDE1-204ENST00000600440 ZBTB7CA1YPR0 619 aa20.38■□□□□ 0.85
SYDE1-204ENST00000600440 TESK2Q96S53 571 aa20.38■□□□□ 0.85
SYDE1-204ENST00000600440 ZNF521Q96K83 1311 aa20.37■□□□□ 0.85
SYDE1-204ENST00000600440 GAPVD1Q14C86 1478 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms