RNA–Protein interactions for RNA: ENST00000599846.5

ARHGEF1-219, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF1, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-219ENST00000599846 RRP1P56182 461 aaKnown RBP21.04■□□□□ 0.96
ARHGEF1-219ENST00000599846 MAGI1Q96QZ7 1491 aaPredicted RBP21.03■□□□□ 0.96
ARHGEF1-219ENST00000599846 SYNJ2O15056 1496 aa21.03■□□□□ 0.96
ARHGEF1-219ENST00000599846 EIF4G3O43432 1585 aaKnown RBP21.02■□□□□ 0.96
ARHGEF1-219ENST00000599846 DEKP35659 375 aaKnown RBP21.01■□□□□ 0.95
ARHGEF1-219ENST00000599846 ATP10BO94823 1461 aa21.01■□□□□ 0.95
ARHGEF1-219ENST00000599846 BRD4O60885 1362 aaPredicted RBP21■□□□□ 0.95
ARHGEF1-219ENST00000599846 BCORL1Q5H9F3 1711 aa21■□□□□ 0.95
ARHGEF1-219ENST00000599846 TMF1P82094 1093 aa20.99■□□□□ 0.95
ARHGEF1-219ENST00000599846 IPO9Q96P70 1041 aaKnown RBP20.97■□□□□ 0.95
ARHGEF1-219ENST00000599846 ITSN2Q9NZM3 1697 aa20.96■□□□□ 0.95
ARHGEF1-219ENST00000599846 WDR43Q15061 677 aaKnown RBP eCLIP20.96■□□□□ 0.95
ARHGEF1-219ENST00000599846 RALGAPBQ86X10 1494 aa20.96■□□□□ 0.95
ARHGEF1-219ENST00000599846 CEP170Q5SW79 1584 aa20.96■□□□□ 0.95
ARHGEF1-219ENST00000599846 ADGRL2O95490 1459 aa20.95■□□□□ 0.95
ARHGEF1-219ENST00000599846 KNSTRNQ9Y448 316 aa20.95■□□□□ 0.94
ARHGEF1-219ENST00000599846 MBD5Q9P267 1494 aa20.95■□□□□ 0.94
ARHGEF1-219ENST00000599846 SKAP1Q86WV1 359 aa20.94■□□□□ 0.94
ARHGEF1-219ENST00000599846 RSPH4AQ5TD94 716 aa20.93■□□□□ 0.94
ARHGEF1-219ENST00000599846 LAS1LQ9Y4W2 734 aaKnown RBP20.93■□□□□ 0.94
ARHGEF1-219ENST00000599846 KDM5CP41229 1560 aa20.91■□□□□ 0.94
ARHGEF1-219ENST00000599846 UHRF1BP1Q6BDS2 1440 aa20.9■□□□□ 0.94
ARHGEF1-219ENST00000599846 RNF123Q5XPI4 1314 aa20.9■□□□□ 0.94
ARHGEF1-219ENST00000599846 PDE3BQ13370 1112 aa20.88■□□□□ 0.93
ARHGEF1-219ENST00000599846 CRBNQ96SW2 442 aa20.88■□□□□ 0.93
ARHGEF1-219ENST00000599846 PDE4AP27815 886 aa20.88■□□□□ 0.93
ARHGEF1-219ENST00000599846 ADAMTS8Q9UP79 889 aa20.88■□□□□ 0.93
ARHGEF1-219ENST00000599846 ADGBQ8N7X0 1667 aa20.87■□□□□ 0.93
ARHGEF1-219ENST00000599846 DISP3Q9P2K9 1392 aa20.86■□□□□ 0.93
ARHGEF1-219ENST00000599846 DAXXQ9UER7 740 aaPredicted RBP20.86■□□□□ 0.93
ARHGEF1-219ENST00000599846 PER1O15534 1290 aaPredicted RBP20.86■□□□□ 0.93
ARHGEF1-219ENST00000599846 CCDC141Q6ZP82 1450 aa20.85■□□□□ 0.93
ARHGEF1-219ENST00000599846 TCERG1O14776 1098 aaKnown RBP20.85■□□□□ 0.93
ARHGEF1-219ENST00000599846 LRPPRCP42704 1394 aaKnown RBP20.85■□□□□ 0.93
ARHGEF1-219ENST00000599846 ARHGAP5Q13017 1502 aa20.85■□□□□ 0.93
ARHGEF1-219ENST00000599846 CHGAP10645 457 aaKnown RBP20.84■□□□□ 0.93
ARHGEF1-219ENST00000599846 CCDC146Q8IYE0 955 aa20.84■□□□□ 0.93
ARHGEF1-219ENST00000599846 ABCC10Q5T3U5 1492 aa20.83■□□□□ 0.93
ARHGEF1-219ENST00000599846 NUP160Q12769 1436 aa20.83■□□□□ 0.93
ARHGEF1-219ENST00000599846 TESK2Q96S53 571 aa20.82■□□□□ 0.92
ARHGEF1-219ENST00000599846 PRAG1Q86YV5 1406 aa20.82■□□□□ 0.92
ARHGEF1-219ENST00000599846 FAM135AQ9P2D6 1515 aa20.82■□□□□ 0.92
ARHGEF1-219ENST00000599846 EFCAB2Q5VUJ9 269 aa20.82■□□□□ 0.92
ARHGEF1-219ENST00000599846 PLEKHH2Q8IVE3 1493 aa20.81■□□□□ 0.92
ARHGEF1-219ENST00000599846 AFAP1Q8N556 730 aa20.8■□□□□ 0.92
ARHGEF1-219ENST00000599846 ARHGEF12Q9NZN5 1544 aa20.8■□□□□ 0.92
ARHGEF1-219ENST00000599846 C20orf194Q5TEA3 1177 aa20.79■□□□□ 0.92
ARHGEF1-219ENST00000599846 PARD3Q8TEW0 1356 aa20.79■□□□□ 0.92
ARHGEF1-219ENST00000599846 SENP3Q9H4L4 574 aaPredicted RBP20.79■□□□□ 0.92
ARHGEF1-219ENST00000599846 SHANK2Q9UPX8 1470 aa20.79■□□□□ 0.92
ARHGEF1-219ENST00000599846 RGS3P49796 1198 aa20.78■□□□□ 0.92
ARHGEF1-219ENST00000599846 ERBINQ96RT1 1412 aa20.78■□□□□ 0.92
ARHGEF1-219ENST00000599846 NEFMP07197 916 aa20.77■□□□□ 0.92
ARHGEF1-219ENST00000599846 CDC42BPAQ5VT25 1732 aa20.77■□□□□ 0.92
ARHGEF1-219ENST00000599846 TNNT2P45379 298 aaPredicted RBP20.77■□□□□ 0.92
ARHGEF1-219ENST00000599846 NEUROD2Q15784 382 aa20.76■□□□□ 0.91
ARHGEF1-219ENST00000599846 POLR1AO95602 1720 aaPredicted RBP20.75■□□□□ 0.91
ARHGEF1-219ENST00000599846 SYCP2Q9BX26 1530 aa20.75■□□□□ 0.91
ARHGEF1-219ENST00000599846 SPAG9O60271 1321 aaKnown RBP20.75■□□□□ 0.91
ARHGEF1-219ENST00000599846 PPP2R1AP30153 589 aa20.74■□□□□ 0.91
ARHGEF1-219ENST00000599846 CDCA8Q53HL2 280 aa20.74■□□□□ 0.91
ARHGEF1-219ENST00000599846 CANXP27824 592 aaKnown RBP20.74■□□□□ 0.91
ARHGEF1-219ENST00000599846 SLC4A3P48751 1232 aa20.73■□□□□ 0.91
ARHGEF1-219ENST00000599846 ABCA8O94911 1581 aa20.73■□□□□ 0.91
ARHGEF1-219ENST00000599846 KIF3BO15066 747 aa20.72■□□□□ 0.91
ARHGEF1-219ENST00000599846 GOLGA2Q08379 1002 aa20.72■□□□□ 0.91
ARHGEF1-219ENST00000599846 BACH2Q9BYV9 841 aa20.72■□□□□ 0.91
ARHGEF1-219ENST00000599846 CROCC2H7BZ55 1655 aa20.72■□□□□ 0.91
ARHGEF1-219ENST00000599846 A2MP01023 1474 aa20.72■□□□□ 0.91
ARHGEF1-219ENST00000599846 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.72■□□□□ 0.91
ARHGEF1-219ENST00000599846 WASHC2CQ9Y4E1 1318 aa20.71■□□□□ 0.91
ARHGEF1-219ENST00000599846 ADCY10Q96PN6 1610 aa20.71■□□□□ 0.91
ARHGEF1-219ENST00000599846 APAF1O14727 1248 aa20.7■□□□□ 0.9
ARHGEF1-219ENST00000599846 PLA2R1Q13018 1463 aa20.69■□□□□ 0.9
ARHGEF1-219ENST00000599846 SAMD9LQ8IVG5 1584 aa20.66■□□□□ 0.9
ARHGEF1-219ENST00000599846 MS4A1P11836 297 aa20.66■□□□□ 0.9
ARHGEF1-219ENST00000599846 CFAP70Q5T0N1 1121 aa20.66■□□□□ 0.9
ARHGEF1-219ENST00000599846 KDM5DQ9BY66 1539 aa20.64■□□□□ 0.9
ARHGEF1-219ENST00000599846 COL17A1Q9UMD9 1497 aaPredicted RBP20.63■□□□□ 0.89
ARHGEF1-219ENST00000599846 FRAT1Q92837 279 aaPredicted RBP20.63■□□□□ 0.89
ARHGEF1-219ENST00000599846 RTN4Q9NQC3 1192 aaKnown RBP20.61■□□□□ 0.89
ARHGEF1-219ENST00000599846 DUSP27Q5VZP5 1158 aa20.61■□□□□ 0.89
ARHGEF1-219ENST00000599846 GPRASP1Q5JY77 1395 aa20.6■□□□□ 0.89
ARHGEF1-219ENST00000599846 AMER1Q5JTC6 1135 aaPredicted RBP20.6■□□□□ 0.89
ARHGEF1-219ENST00000599846 ARHGEF5Q12774 1597 aa20.6■□□□□ 0.89
ARHGEF1-219ENST00000599846 DDRGK1Q96HY6 314 aa20.6■□□□□ 0.89
ARHGEF1-219ENST00000599846 BCAR3O75815 825 aa20.6■□□□□ 0.89
ARHGEF1-219ENST00000599846 RRP7AQ9Y3A4 280 aaKnown RBP20.6■□□□□ 0.89
ARHGEF1-219ENST00000599846 PLEKHH1Q9ULM0 1364 aa20.59■□□□□ 0.89
ARHGEF1-219ENST00000599846 TRAK1Q9UPV9 953 aa20.58■□□□□ 0.88
ARHGEF1-219ENST00000599846 CENPQQ7L2Z9 268 aaPredicted RBP20.57■□□□□ 0.88
ARHGEF1-219ENST00000599846 KANK1Q14678 1352 aa20.57■□□□□ 0.88
ARHGEF1-219ENST00000599846 PPM1GO15355 546 aaPredicted RBP20.57■□□□□ 0.88
ARHGEF1-219ENST00000599846 TRAPPC8Q9Y2L5 1435 aa20.57■□□□□ 0.88
ARHGEF1-219ENST00000599846 NUTM2DQ5VT03 806 aaPredicted RBP20.56■□□□□ 0.88
ARHGEF1-219ENST00000599846 GGT6Q6P531 493 aa20.55■□□□□ 0.88
ARHGEF1-219ENST00000599846 TTC37Q6PGP7 1564 aa20.55■□□□□ 0.88
ARHGEF1-219ENST00000599846 SPINK5Q9NQ38 1064 aaPredicted RBP20.54■□□□□ 0.88
ARHGEF1-219ENST00000599846 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.54■□□□□ 0.88
ARHGEF1-219ENST00000599846 TRPM1Q7Z4N2 1603 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms