RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 PLEKHH2Q8IVE3 1493 aa19.03■□□□□ 0.64
SYMPK-213ENST00000599460 MINK1Q8N4C8 1332 aaPredicted RBP19.03■□□□□ 0.64
SYMPK-213ENST00000599460 PCF11O94913 1555 aaKnown RBP19.02■□□□□ 0.64
SYMPK-213ENST00000599460 RGS3P49796 1198 aa19.01■□□□□ 0.63
SYMPK-213ENST00000599460 B4GALNT3Q6L9W6 998 aa19■□□□□ 0.63
SYMPK-213ENST00000599460 AEBP2Q6ZN18 517 aaPredicted RBP19■□□□□ 0.63
SYMPK-213ENST00000599460 CCDC146Q8IYE0 955 aa19■□□□□ 0.63
SYMPK-213ENST00000599460 SCAPERQ9BY12 1400 aa18.99■□□□□ 0.63
SYMPK-213ENST00000599460 MYBBP1AQ9BQG0 1328 aaKnown RBP18.98■□□□□ 0.63
SYMPK-213ENST00000599460 CALD1Q05682 793 aaKnown RBP18.98■□□□□ 0.63
SYMPK-213ENST00000599460 PLB1Q6P1J6 1458 aa18.98■□□□□ 0.63
SYMPK-213ENST00000599460 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.98■□□□□ 0.63
SYMPK-213ENST00000599460 DAPK1P53355 1430 aa18.97■□□□□ 0.63
SYMPK-213ENST00000599460 CASC1Q6TDU7 716 aa18.97■□□□□ 0.63
SYMPK-213ENST00000599460 AMPHP49418 695 aa18.96■□□□□ 0.63
SYMPK-213ENST00000599460 STAC3Q96MF2 364 aa18.96■□□□□ 0.63
SYMPK-213ENST00000599460 OS9Q13438 667 aaPredicted RBP18.95■□□□□ 0.62
SYMPK-213ENST00000599460 RCAN3Q9UKA8 241 aa18.95■□□□□ 0.62
SYMPK-213ENST00000599460 CGNL1Q0VF96 1302 aa18.94■□□□□ 0.62
SYMPK-213ENST00000599460 NPHP1O15259 732 aa18.94■□□□□ 0.62
SYMPK-213ENST00000599460 BECN1Q14457 450 aa18.94■□□□□ 0.62
SYMPK-213ENST00000599460 DDRGK1Q96HY6 314 aa18.94■□□□□ 0.62
SYMPK-213ENST00000599460 HFM1A2PYH4 1435 aa18.93■□□□□ 0.62
SYMPK-213ENST00000599460 RAPGEF3O95398 923 aa18.93■□□□□ 0.62
SYMPK-213ENST00000599460 NBR1Q14596 966 aa18.93■□□□□ 0.62
SYMPK-213ENST00000599460 ARHGEF11O15085 1522 aa18.93■□□□□ 0.62
SYMPK-213ENST00000599460 PRKRIP1Q9H875 184 aaPredicted RBP18.93■□□□□ 0.62
SYMPK-213ENST00000599460 LTV1Q96GA3 475 aaPredicted RBP18.92■□□□□ 0.62
SYMPK-213ENST00000599460 CENPJQ9HC77 1338 aaPredicted RBP18.92■□□□□ 0.62
SYMPK-213ENST00000599460 ANP32BQ92688 251 aaKnown RBP18.91■□□□□ 0.62
SYMPK-213ENST00000599460 IPO8O15397 1037 aaKnown RBP18.91■□□□□ 0.62
SYMPK-213ENST00000599460 GOLGA2Q08379 1002 aa18.91■□□□□ 0.62
SYMPK-213ENST00000599460 COG3Q96JB2 828 aa18.91■□□□□ 0.62
SYMPK-213ENST00000599460 TMEM132EQ6IEE7 984 aa18.89■□□□□ 0.61
SYMPK-213ENST00000599460 KIAA1107Q9UPP5 1409 aa18.88■□□□□ 0.61
SYMPK-213ENST00000599460 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.87■□□□□ 0.613e-6■■■■□ 26.4
SYMPK-213ENST00000599460 KIF7Q2M1P5 1343 aa18.86■□□□□ 0.61
SYMPK-213ENST00000599460 EIF5BO60841 1220 aaKnown RBP18.85■□□□□ 0.61
SYMPK-213ENST00000599460 CCDC7Q96M83 1385 aa18.85■□□□□ 0.61
SYMPK-213ENST00000599460 RRP7AQ9Y3A4 280 aaKnown RBP18.85■□□□□ 0.61
SYMPK-213ENST00000599460 CFAP70Q5T0N1 1121 aa18.85■□□□□ 0.61
SYMPK-213ENST00000599460 CCDC9Q9Y3X0 531 aaKnown RBP18.84■□□□□ 0.61
SYMPK-213ENST00000599460 KIF14Q15058 1648 aa18.84■□□□□ 0.61
SYMPK-213ENST00000599460 ITPRIPQ8IWB1 547 aa18.83■□□□□ 0.61
SYMPK-213ENST00000599460 CAMSAP2Q08AD1 1489 aa18.83■□□□□ 0.61
SYMPK-213ENST00000599460 LMOD3Q0VAK6 560 aa18.83■□□□□ 0.6
SYMPK-213ENST00000599460 PDE3BQ13370 1112 aa18.83■□□□□ 0.6
SYMPK-213ENST00000599460 SMC4Q9NTJ3 1288 aa18.82■□□□□ 0.6
SYMPK-213ENST00000599460 CCDC141Q6ZP82 1450 aa18.81■□□□□ 0.6
SYMPK-213ENST00000599460 CD109Q6YHK3 1445 aa18.81■□□□□ 0.6
SYMPK-213ENST00000599460 PTPN23Q9H3S7 1636 aa18.81■□□□□ 0.6
SYMPK-213ENST00000599460 STK31Q9BXU1 1019 aa18.8■□□□□ 0.6
SYMPK-213ENST00000599460 ROCK1Q13464 1354 aa18.8■□□□□ 0.6
SYMPK-213ENST00000599460 MAP3K1Q13233 1512 aa18.8■□□□□ 0.6
SYMPK-213ENST00000599460 CABP2Q9NPB3 220 aa18.8■□□□□ 0.6
SYMPK-213ENST00000599460 ZNF330Q9Y3S2 320 aaPredicted RBP18.8■□□□□ 0.6
SYMPK-213ENST00000599460 NAIPQ13075 1403 aa18.79■□□□□ 0.6
SYMPK-213ENST00000599460 NBPF1Q3BBV0 1214 aa18.78■□□□□ 0.6
SYMPK-213ENST00000599460 PSME1Q06323 249 aa18.77■□□□□ 0.6
SYMPK-213ENST00000599460 TXNDC2Q86VQ3 553 aa18.77■□□□□ 0.6
SYMPK-213ENST00000599460 APBB1O00213 710 aa18.77■□□□□ 0.6
SYMPK-213ENST00000599460 CHMP4AQ9BY43 222 aa18.76■□□□□ 0.59
SYMPK-213ENST00000599460 ABCC5O15440 1437 aa18.76■□□□□ 0.59
SYMPK-213ENST00000599460 ERICH6BQ5W0A0 696 aa18.75■□□□□ 0.59
SYMPK-213ENST00000599460 WASHC2AQ641Q2 1341 aa18.75■□□□□ 0.59
SYMPK-213ENST00000599460 NBPF8Q3BBV2 869 aa18.75■□□□□ 0.59
SYMPK-213ENST00000599460 CNTLNQ9NXG0 1405 aa18.74■□□□□ 0.59
SYMPK-213ENST00000599460 CLUAP1Q96AJ1 413 aa18.74■□□□□ 0.59
SYMPK-213ENST00000599460 SLC52A1Q9NWF4 448 aa18.74■□□□□ 0.59
SYMPK-213ENST00000599460 DIAPH1O60610 1272 aaKnown RBP18.74■□□□□ 0.59
SYMPK-213ENST00000599460 RWDD1Q9H446 243 aaPredicted RBP18.74■□□□□ 0.59
SYMPK-213ENST00000599460 ADGRL1O94910 1474 aa18.74■□□□□ 0.59
SYMPK-213ENST00000599460 KIF21AQ7Z4S6 1674 aa18.73■□□□□ 0.59
SYMPK-213ENST00000599460 KCNJ4P48050 445 aa18.71■□□□□ 0.59
SYMPK-213ENST00000599460 APAF1O14727 1248 aa18.71■□□□□ 0.59
SYMPK-213ENST00000599460 GGNBP2Q9H3C7 697 aa18.71■□□□□ 0.58
SYMPK-213ENST00000599460 ERBINQ96RT1 1412 aa18.7■□□□□ 0.58
SYMPK-213ENST00000599460 NCLP19338 710 aaKnown RBP18.7■□□□□ 0.58
SYMPK-213ENST00000599460 PRAM1Q96QH2 718 aa18.7■□□□□ 0.58
SYMPK-213ENST00000599460 SLC4A10Q6U841 1118 aa18.7■□□□□ 0.58
SYMPK-213ENST00000599460 ATF3P18847 181 aa18.69■□□□□ 0.58
SYMPK-213ENST00000599460 GOLGA6L22H0YM25 854 aa18.69■□□□□ 0.58
SYMPK-213ENST00000599460 THOC2Q8NI27 1593 aaKnown RBP18.69■□□□□ 0.58
SYMPK-213ENST00000599460 THEMISQ8N1K5 641 aaPredicted RBP18.69■□□□□ 0.58
SYMPK-213ENST00000599460 ZBED9Q6R2W3 1325 aa18.68■□□□□ 0.58
SYMPK-213ENST00000599460 EVA1CP58658 441 aa18.68■□□□□ 0.58
SYMPK-213ENST00000599460 E9PSI1 815 aa18.68■□□□□ 0.58
SYMPK-213ENST00000599460 C1orf141Q5JVX7 400 aa18.68■□□□□ 0.58
SYMPK-213ENST00000599460 AKNAQ7Z591 1439 aa18.68■□□□□ 0.58
SYMPK-213ENST00000599460 ELL2O00472 640 aaPredicted RBP18.68■□□□□ 0.58
SYMPK-213ENST00000599460 PMFBP1Q8TBY8 1022 aa18.67■□□□□ 0.58
SYMPK-213ENST00000599460 RAPGEF6Q8TEU7 1601 aa18.67■□□□□ 0.58
SYMPK-213ENST00000599460 POGZQ7Z3K3 1410 aa18.67■□□□□ 0.58
SYMPK-213ENST00000599460 GLIPR1L2Q4G1C9 344 aa18.65■□□□□ 0.58
SYMPK-213ENST00000599460 ANP32EQ9BTT0 268 aa18.65■□□□□ 0.58
SYMPK-213ENST00000599460 ADAMTS12P58397 1594 aa18.65■□□□□ 0.58
SYMPK-213ENST00000599460 FGD1P98174 961 aa18.65■□□□□ 0.58
SYMPK-213ENST00000599460 BCL2L13Q9BXK5 485 aa18.64■□□□□ 0.57
SYMPK-213ENST00000599460 RPGRIP1LQ68CZ1 1315 aa18.64■□□□□ 0.57
SYMPK-213ENST00000599460 CTTNBP2Q8WZ74 1663 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms