RNA–Protein interactions for RNA: ENST00000593209.5

GHDC-212, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-212ENST00000593209 ATP7AQ04656 1500 aa27.15■■□□□ 1.94
GHDC-212ENST00000593209 UNC13BO14795 1591 aa27.15■■□□□ 1.94
GHDC-212ENST00000593209 SLC4A1APQ9BWU0 796 aaKnown RBP27.14■■□□□ 1.94
GHDC-212ENST00000593209 ARHGEF40Q8TER5 1519 aa27.11■■□□□ 1.93
GHDC-212ENST00000593209 MLH3Q9UHC1 1453 aa27.11■■□□□ 1.93
GHDC-212ENST00000593209 ABCA6Q8N139 1617 aa27.1■■□□□ 1.93
GHDC-212ENST00000593209 MAGI2Q86UL8 1455 aa27.08■■□□□ 1.93
GHDC-212ENST00000593209 DIP2CQ9Y2E4 1556 aa27.06■■□□□ 1.92
GHDC-212ENST00000593209 DUOX2Q9NRD8 1548 aa27.06■■□□□ 1.92
GHDC-212ENST00000593209 NUP155O75694 1391 aa27.05■■□□□ 1.92
GHDC-212ENST00000593209 SIGLEC1Q9BZZ2 1709 aa27.04■■□□□ 1.92
GHDC-212ENST00000593209 FAM135AQ9P2D6 1515 aa27.04■■□□□ 1.92
GHDC-212ENST00000593209 IQGAP3Q86VI3 1631 aa27.02■■□□□ 1.92
GHDC-212ENST00000593209 PKD2Q13563 968 aa27.01■■□□□ 1.91
GHDC-212ENST00000593209 ATP10AO60312 1499 aa27■■□□□ 1.91
GHDC-212ENST00000593209 MIER1Q8N108 512 aa26.99■■□□□ 1.91
GHDC-212ENST00000593209 ERBINQ96RT1 1412 aa26.99■■□□□ 1.91
GHDC-212ENST00000593209 L3MBTL2Q969R5 705 aa26.98■■□□□ 1.91
GHDC-212ENST00000593209 ARID4BQ4LE39 1312 aaPredicted RBP26.96■■□□□ 1.91
GHDC-212ENST00000593209 DHX29Q7Z478 1369 aaKnown RBP26.96■■□□□ 1.91
GHDC-212ENST00000593209 A2MP01023 1474 aa26.95■■□□□ 1.9
GHDC-212ENST00000593209 DEPDC5O75140 1603 aa26.91■■□□□ 1.9
GHDC-212ENST00000593209 MLECQ14165 292 aa26.89■■□□□ 1.9
GHDC-212ENST00000593209 EIF2AK4Q9P2K8 1649 aaKnown RBP26.89■■□□□ 1.89
GHDC-212ENST00000593209 REREQ9P2R6 1566 aa26.88■■□□□ 1.89
GHDC-212ENST00000593209 HIRIP3Q9BW71 556 aaPredicted RBP26.86■■□□□ 1.89
GHDC-212ENST00000593209 KIF3BO15066 747 aa26.86■■□□□ 1.89
GHDC-212ENST00000593209 NBPF8Q3BBV2 869 aa26.85■■□□□ 1.89
GHDC-212ENST00000593209 BCORL1Q5H9F3 1711 aa26.84■■□□□ 1.89
GHDC-212ENST00000593209 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.82■■□□□ 1.88
GHDC-212ENST00000593209 PLA2R1Q13018 1463 aa26.82■■□□□ 1.88
GHDC-212ENST00000593209 KDM4FA0A1W2PPD8 638 aa26.8■■□□□ 1.88
GHDC-212ENST00000593209 MROH1Q8NDA8 1641 aa26.8■■□□□ 1.88
GHDC-212ENST00000593209 AGLP35573 1532 aa26.79■■□□□ 1.88
GHDC-212ENST00000593209 E9PCH4 1651 aa26.79■■□□□ 1.88
GHDC-212ENST00000593209 RNF17Q9BXT8 1623 aaKnown RBP26.79■■□□□ 1.88
GHDC-212ENST00000593209 VWDEQ8N2E2 1590 aa26.77■■□□□ 1.88
GHDC-212ENST00000593209 MADDQ8WXG6 1647 aa26.75■■□□□ 1.87
GHDC-212ENST00000593209 ADAMTSL3P82987 1691 aa26.75■■□□□ 1.87
GHDC-212ENST00000593209 PRDM15P57071 1507 aaPredicted RBP26.75■■□□□ 1.87
GHDC-212ENST00000593209 GGT6Q6P531 493 aa26.74■■□□□ 1.87
GHDC-212ENST00000593209 UHRF1BP1Q6BDS2 1440 aa26.74■■□□□ 1.87
GHDC-212ENST00000593209 TET3O43151 1660 aa26.73■■□□□ 1.87
GHDC-212ENST00000593209 POLR1AO95602 1720 aaPredicted RBP26.72■■□□□ 1.87
GHDC-212ENST00000593209 HSPA5P11021 654 aaKnown RBP26.72■■□□□ 1.87
GHDC-212ENST00000593209 FER1L4A9Z1Z3 1794 aa26.71■■□□□ 1.87
GHDC-212ENST00000593209 RIMS1Q86UR5 1692 aaKnown RBP26.7■■□□□ 1.86
GHDC-212ENST00000593209 DDX10Q13206 875 aaKnown RBP26.69■■□□□ 1.86
GHDC-212ENST00000593209 SPHKAPQ2M3C7 1700 aa26.69■■□□□ 1.86
GHDC-212ENST00000593209 SPATA31E1Q6ZUB1 1445 aa26.69■■□□□ 1.86
GHDC-212ENST00000593209 CCDC144AA2RUR9 1427 aa26.68■■□□□ 1.86
GHDC-212ENST00000593209 CEP152O94986 1710 aa26.67■■□□□ 1.86
GHDC-212ENST00000593209 KANK1Q14678 1352 aa26.67■■□□□ 1.86
GHDC-212ENST00000593209 RALGAPBQ86X10 1494 aa26.66■■□□□ 1.86
GHDC-212ENST00000593209 PLPPR3Q6T4P5 718 aa26.66■■□□□ 1.86
GHDC-212ENST00000593209 EIF4G2P78344 907 aaKnown RBP eCLIP26.65■■□□□ 1.86
GHDC-212ENST00000593209 CLTCQ00610 1675 aaKnown RBP26.63■■□□□ 1.85
GHDC-212ENST00000593209 TRPM2O94759 1503 aa26.62■■□□□ 1.85
GHDC-212ENST00000593209 TRPM1Q7Z4N2 1603 aa26.61■■□□□ 1.85
GHDC-212ENST00000593209 LMTK2Q8IWU2 1503 aa26.61■■□□□ 1.85
GHDC-212ENST00000593209 ESF1Q9H501 851 aaKnown RBP26.6■■□□□ 1.85
GHDC-212ENST00000593209 ABCC3O15438 1527 aa26.6■■□□□ 1.85
GHDC-212ENST00000593209 CLTCL1P53675 1640 aa26.59■■□□□ 1.85
GHDC-212ENST00000593209 WASHC2AQ641Q2 1341 aa26.59■■□□□ 1.85
GHDC-212ENST00000593209 WASHC2CQ9Y4E1 1318 aa26.59■■□□□ 1.85
GHDC-212ENST00000593209 PTPRTO14522 1441 aa26.57■■□□□ 1.84
GHDC-212ENST00000593209 PTPRMP28827 1452 aa26.57■■□□□ 1.84
GHDC-212ENST00000593209 CFAP65Q6ZU64 1925 aaKnown RBP26.57■■□□□ 1.84
GHDC-212ENST00000593209 CEBPAP49715 358 aaPredicted RBP26.56■■□□□ 1.84
GHDC-212ENST00000593209 EFCAB6Q5THR3 1501 aa26.56■■□□□ 1.84
GHDC-212ENST00000593209 ZC3H13Q5T200 1668 aaKnown RBP26.56■■□□□ 1.84
GHDC-212ENST00000593209 CAMSAP1Q5T5Y3 1602 aa26.54■■□□□ 1.84
GHDC-212ENST00000593209 PRAG1Q86YV5 1406 aa26.54■■□□□ 1.84
GHDC-212ENST00000593209 ZNF326Q5BKZ1 582 aaKnown RBP26.53■■□□□ 1.84
GHDC-212ENST00000593209 C11orf95C9JLR9 678 aaPredicted RBP26.53■■□□□ 1.84
GHDC-212ENST00000593209 YTHDC1Q96MU7 727 aaKnown RBP26.53■■□□□ 1.84
GHDC-212ENST00000593209 C3P01024 1663 aa26.52■■□□□ 1.84
GHDC-212ENST00000593209 PPP6R1Q9UPN7 881 aa26.52■■□□□ 1.84
GHDC-212ENST00000593209 DCAF11Q8TEB1 546 aa26.51■■□□□ 1.83
GHDC-212ENST00000593209 USP47Q96K76 1375 aa26.51■■□□□ 1.83
GHDC-212ENST00000593209 CCDC7Q96M83 1385 aa26.5■■□□□ 1.83
GHDC-212ENST00000593209 CNTLNQ9NXG0 1405 aa26.5■■□□□ 1.83
GHDC-212ENST00000593209 MROH2AA6NES4 1674 aa26.49■■□□□ 1.83
GHDC-212ENST00000593209 NPATQ14207 1427 aa26.49■■□□□ 1.83
GHDC-212ENST00000593209 KDM2AQ9Y2K7 1162 aa26.49■■□□□ 1.83
GHDC-212ENST00000593209 AEBP2Q6ZN18 517 aaPredicted RBP26.48■■□□□ 1.83
GHDC-212ENST00000593209 ZMYM3Q14202 1370 aa26.48■■□□□ 1.83
GHDC-212ENST00000593209 LAMC1P11047 1609 aa26.48■■□□□ 1.83
GHDC-212ENST00000593209 CENPBP07199 599 aaPredicted RBP26.47■■□□□ 1.83
GHDC-212ENST00000593209 ARHGAP31Q2M1Z3 1444 aa26.44■■□□□ 1.82
GHDC-212ENST00000593209 SCAF1Q9H7N4 1312 aaKnown RBP26.44■■□□□ 1.82
GHDC-212ENST00000593209 NEURL4Q96JN8 1562 aa26.43■■□□□ 1.82
GHDC-212ENST00000593209 UGGT1Q9NYU2 1555 aa26.43■■□□□ 1.82
GHDC-212ENST00000593209 RGL3Q3MIN7 710 aa26.43■■□□□ 1.82
GHDC-212ENST00000593209 KIF7Q2M1P5 1343 aa26.41■■□□□ 1.82
GHDC-212ENST00000593209 KIF1BO60333 1816 aa26.41■■□□□ 1.82
GHDC-212ENST00000593209 IFT172Q9UG01 1749 aa26.4■■□□□ 1.82
GHDC-212ENST00000593209 FBXO31Q5XUX0 539 aaPredicted RBP26.39■■□□□ 1.82
GHDC-212ENST00000593209 GPRASP1Q5JY77 1395 aa26.39■■□□□ 1.81
GHDC-212ENST00000593209 PREX1Q8TCU6 1659 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms