RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 BRD4O60885 1362 aaPredicted RBP9.95□□□□□ -0.82
NEDD4L-229ENST00000590506 TMEM132AQ24JP5 1023 aa9.95□□□□□ -0.82
NEDD4L-229ENST00000590506 PDE4CQ08493 712 aa9.94□□□□□ -0.82
NEDD4L-229ENST00000590506 KDM6BO15054 1643 aa9.94□□□□□ -0.82
NEDD4L-229ENST00000590506 MYBBP1AQ9BQG0 1328 aaKnown RBP9.94□□□□□ -0.82
NEDD4L-229ENST00000590506 SEC24BO95487 1268 aa9.94□□□□□ -0.82
NEDD4L-229ENST00000590506 KIAA1211Q6ZU35 1233 aa9.94□□□□□ -0.82
NEDD4L-229ENST00000590506 MYH16Q9H6N6 1097 aa9.94□□□□□ -0.82
NEDD4L-229ENST00000590506 ANTXR1Q9H6X2 564 aa9.94□□□□□ -0.82
NEDD4L-229ENST00000590506 MRE11P49959 708 aa9.93□□□□□ -0.82
NEDD4L-229ENST00000590506 ZNF326Q5BKZ1 582 aaKnown RBP9.93□□□□□ -0.82
NEDD4L-229ENST00000590506 SPRYD3Q8NCJ5 442 aa9.93□□□□□ -0.82
NEDD4L-229ENST00000590506 KIF15Q9NS87 1388 aa9.93□□□□□ -0.82
NEDD4L-229ENST00000590506 TEX14Q8IWB6 1497 aa9.93□□□□□ -0.82
NEDD4L-229ENST00000590506 EFCAB5A4FU69 1503 aa9.92□□□□□ -0.82
NEDD4L-229ENST00000590506 TRIM44Q96DX7 344 aaPredicted RBP9.92□□□□□ -0.82
NEDD4L-229ENST00000590506 GRPEL1Q9HAV7 217 aa9.92□□□□□ -0.82
NEDD4L-229ENST00000590506 USP47Q96K76 1375 aa9.92□□□□□ -0.82
NEDD4L-229ENST00000590506 MIA2Q96PC5 1412 aa9.92□□□□□ -0.82
NEDD4L-229ENST00000590506 MCM4P33991 863 aa9.91□□□□□ -0.82
NEDD4L-229ENST00000590506 VIRMAQ69YN4 1812 aaKnown RBP9.9□□□□□ -0.82
NEDD4L-229ENST00000590506 RPRD2Q5VT52 1461 aaKnown RBP9.9□□□□□ -0.82
NEDD4L-229ENST00000590506 TRAK2O60296 914 aa9.9□□□□□ -0.82
NEDD4L-229ENST00000590506 RALBP1Q15311 655 aa9.9□□□□□ -0.83
NEDD4L-229ENST00000590506 ARID3AQ99856 593 aa9.9□□□□□ -0.83
NEDD4L-229ENST00000590506 GCC2Q8IWJ2 1684 aa9.89□□□□□ -0.83
NEDD4L-229ENST00000590506 SNAPC4Q5SXM2 1469 aa9.89□□□□□ -0.83
NEDD4L-229ENST00000590506 ANKRD30BQ9BXX2 1392 aa9.89□□□□□ -0.83
NEDD4L-229ENST00000590506 RIPK4P57078 832 aa9.89□□□□□ -0.83
NEDD4L-229ENST00000590506 FAM13BQ9NYF5 915 aa9.89□□□□□ -0.83
NEDD4L-229ENST00000590506 HMGXB3Q12766 1538 aa9.89□□□□□ -0.83
NEDD4L-229ENST00000590506 ZHX1Q9UKY1 873 aaPredicted RBP9.88□□□□□ -0.83
NEDD4L-229ENST00000590506 TBC1D2Q9BYX2 928 aa9.88□□□□□ -0.83
NEDD4L-229ENST00000590506 ROCK2O75116 1388 aaKnown RBP9.87□□□□□ -0.83
NEDD4L-229ENST00000590506 C14orf37Q86TY3 774 aa9.86□□□□□ -0.83
NEDD4L-229ENST00000590506 NLRP13Q86W25 1043 aa9.86□□□□□ -0.83
NEDD4L-229ENST00000590506 PRDM10Q9NQV6 1147 aa9.86□□□□□ -0.83
NEDD4L-229ENST00000590506 SUPT6HQ7KZ85 1726 aaKnown RBP9.86□□□□□ -0.83
NEDD4L-229ENST00000590506 BCL11BQ9C0K0 894 aaPredicted RBP9.86□□□□□ -0.83
NEDD4L-229ENST00000590506 NLRP1Q9C000 1473 aa9.85□□□□□ -0.83
NEDD4L-229ENST00000590506 SMAP1Q8IYB5 467 aaPredicted RBP9.84□□□□□ -0.83
NEDD4L-229ENST00000590506 KDM5CP41229 1560 aa9.84□□□□□ -0.83
NEDD4L-229ENST00000590506 IGHDP01880 384 aa9.84□□□□□ -0.83
NEDD4L-229ENST00000590506 GAS2L3Q86XJ1 694 aa9.84□□□□□ -0.83
NEDD4L-229ENST00000590506 EHBP1L1Q8N3D4 1523 aa9.84□□□□□ -0.83
NEDD4L-229ENST00000590506 OFD1O75665 1012 aa9.84□□□□□ -0.84
NEDD4L-229ENST00000590506 UGGT2Q9NYU1 1516 aa9.83□□□□□ -0.84
NEDD4L-229ENST00000590506 THOC2Q8NI27 1593 aaKnown RBP9.83□□□□□ -0.84
NEDD4L-229ENST00000590506 BBXQ8WY36 941 aaPredicted RBP9.83□□□□□ -0.84
NEDD4L-229ENST00000590506 MAP7D2Q96T17 732 aa9.83□□□□□ -0.84
NEDD4L-229ENST00000590506 R3HCC1Q9Y3T6 440 aaKnown RBP9.83□□□□□ -0.84
NEDD4L-229ENST00000590506 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.82□□□□□ -0.84
NEDD4L-229ENST00000590506 CHMP5Q9NZZ3 219 aa9.82□□□□□ -0.84
NEDD4L-229ENST00000590506 GRIN2BQ13224 1484 aa9.82□□□□□ -0.84
NEDD4L-229ENST00000590506 TCOF1Q13428 1488 aaKnown RBP9.82□□□□□ -0.84
NEDD4L-229ENST00000590506 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.82□□□□□ -0.84
NEDD4L-229ENST00000590506 BLMP54132 1417 aaPredicted RBP9.81□□□□□ -0.84
NEDD4L-229ENST00000590506 TBC1D32Q96NH3 1257 aa9.81□□□□□ -0.84
NEDD4L-229ENST00000590506 UPF2Q9HAU5 1272 aaKnown RBP9.81□□□□□ -0.84
NEDD4L-229ENST00000590506 LRRIQ1Q96JM4 1722 aa9.81□□□□□ -0.84
NEDD4L-229ENST00000590506 ZMYM4Q5VZL5 1548 aa9.81□□□□□ -0.84
NEDD4L-229ENST00000590506 RAD54L2Q9Y4B4 1467 aa9.81□□□□□ -0.84
NEDD4L-229ENST00000590506 DUSP27Q5VZP5 1158 aa9.8□□□□□ -0.84
NEDD4L-229ENST00000590506 ZSCAN30Q86W11 494 aa9.8□□□□□ -0.84
NEDD4L-229ENST00000590506 PARD3Q8TEW0 1356 aa9.8□□□□□ -0.84
NEDD4L-229ENST00000590506 CADPSQ9ULU8 1353 aa9.8□□□□□ -0.84
NEDD4L-229ENST00000590506 ST20-MTHFSA0A0A6YYL1 179 aa9.8□□□□□ -0.84
NEDD4L-229ENST00000590506 DDX11L8A8MPP1 907 aa9.8□□□□□ -0.84
NEDD4L-229ENST00000590506 MSNP26038 577 aaKnown RBP9.8□□□□□ -0.84
NEDD4L-229ENST00000590506 CARD11Q9BXL7 1154 aa9.8□□□□□ -0.84
NEDD4L-229ENST00000590506 ISY1Q9ULR0 285 aaKnown RBP9.8□□□□□ -0.84
NEDD4L-229ENST00000590506 CTTNBP2Q8WZ74 1663 aa9.79□□□□□ -0.84
NEDD4L-229ENST00000590506 CC2D1BQ5T0F9 858 aaKnown RBP9.79□□□□□ -0.84
NEDD4L-229ENST00000590506 MBD5Q9P267 1494 aa9.79□□□□□ -0.84
NEDD4L-229ENST00000590506 ARHGEF11O15085 1522 aa9.79□□□□□ -0.84
NEDD4L-229ENST00000590506 MAGI3Q5TCQ9 1506 aa9.79□□□□□ -0.84
NEDD4L-229ENST00000590506 UQCRHLA0A096LP55 91 aa9.79□□□□□ -0.84
NEDD4L-229ENST00000590506 UQCRHP07919 91 aa9.79□□□□□ -0.84
NEDD4L-229ENST00000590506 PDIA4P13667 645 aaKnown RBP9.79□□□□□ -0.84
NEDD4L-229ENST00000590506 GTF2E1P29083 439 aaPredicted RBP9.79□□□□□ -0.84
NEDD4L-229ENST00000590506 KIF14Q15058 1648 aa9.78□□□□□ -0.84
NEDD4L-229ENST00000590506 MAPK8IP3Q9UPT6 1336 aa9.78□□□□□ -0.84
NEDD4L-229ENST00000590506 E9PCH4 1651 aa9.78□□□□□ -0.84
NEDD4L-229ENST00000590506 ARID3CA6NKF2 412 aa9.78□□□□□ -0.84
NEDD4L-229ENST00000590506 TERF1P54274 439 aa9.78□□□□□ -0.84
NEDD4L-229ENST00000590506 CCDC173Q0VFZ6 552 aa9.78□□□□□ -0.84
NEDD4L-229ENST00000590506 PRDM2Q13029 1718 aa9.78□□□□□ -0.84
NEDD4L-229ENST00000590506 EIF3AQ14152 1382 aaKnown RBP9.77□□□□□ -0.84
NEDD4L-229ENST00000590506 PLEKHH2Q8IVE3 1493 aa9.77□□□□□ -0.85
NEDD4L-229ENST00000590506 PLEKHH1Q9ULM0 1364 aa9.77□□□□□ -0.85
NEDD4L-229ENST00000590506 DMTNQ08495 405 aa9.77□□□□□ -0.85
NEDD4L-229ENST00000590506 BCAR3O75815 825 aa9.76□□□□□ -0.85
NEDD4L-229ENST00000590506 ADAMTS8Q9UP79 889 aa9.76□□□□□ -0.85
NEDD4L-229ENST00000590506 STAC3Q96MF2 364 aa9.76□□□□□ -0.85
NEDD4L-229ENST00000590506 ABCA10Q8WWZ4 1543 aa9.76□□□□□ -0.85
NEDD4L-229ENST00000590506 PPP1R9BQ96SB3 815 aa9.76□□□□□ -0.85
NEDD4L-229ENST00000590506 NAP1L2Q9ULW6 460 aaPredicted RBP9.76□□□□□ -0.85
NEDD4L-229ENST00000590506 CUL7Q14999 1698 aa9.75□□□□□ -0.85
NEDD4L-229ENST00000590506 CANXP27824 592 aaKnown RBP9.75□□□□□ -0.85
NEDD4L-229ENST00000590506 NASPP49321 788 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms