RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 HMMRO75330 724 aa18.11■□□□□ 0.49
SMARCA4-214ENST00000589677 CARMIL2Q6F5E8 1435 aa18.1■□□□□ 0.49
SMARCA4-214ENST00000589677 E9PSI1 815 aa18.1■□□□□ 0.49
SMARCA4-214ENST00000589677 SETQ01105 290 aaPredicted RBP18.1■□□□□ 0.49
SMARCA4-214ENST00000589677 ATP6V1DQ9Y5K8 247 aa18.1■□□□□ 0.49
SMARCA4-214ENST00000589677 RAPGEF2Q9Y4G8 1499 aa18.09■□□□□ 0.49
SMARCA4-214ENST00000589677 PAK3O75914 559 aaPredicted RBP18.08■□□□□ 0.49
SMARCA4-214ENST00000589677 RRP9O43818 475 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-214ENST00000589677 GNL2Q13823 731 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-214ENST00000589677 C14orf37Q86TY3 774 aa18.07■□□□□ 0.48
SMARCA4-214ENST00000589677 TAOK2Q9UL54 1235 aa18.07■□□□□ 0.48
SMARCA4-214ENST00000589677 GPS2Q13227 327 aa18.07■□□□□ 0.48
SMARCA4-214ENST00000589677 TEX35Q5T0J7 233 aa18.06■□□□□ 0.48
SMARCA4-214ENST00000589677 CCDC146Q8IYE0 955 aa18.06■□□□□ 0.48
SMARCA4-214ENST00000589677 EIF3AQ14152 1382 aaKnown RBP18.06■□□□□ 0.48
SMARCA4-214ENST00000589677 NGEFQ8N5V2 710 aa18.05■□□□□ 0.48
SMARCA4-214ENST00000589677 R3HCC1Q9Y3T6 440 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-214ENST00000589677 AAMPQ13685 434 aa18.04■□□□□ 0.48
SMARCA4-214ENST00000589677 KANK1Q14678 1352 aa18.04■□□□□ 0.48
SMARCA4-214ENST00000589677 CCDC39Q9UFE4 941 aa18.04■□□□□ 0.48
SMARCA4-214ENST00000589677 NUCB2P80303 420 aa18.04■□□□□ 0.48
SMARCA4-214ENST00000589677 ISY1Q9ULR0 285 aaKnown RBP18.03■□□□□ 0.48
SMARCA4-214ENST00000589677 CCDC34Q96HJ3 373 aa18.03■□□□□ 0.48
SMARCA4-214ENST00000589677 NUP155O75694 1391 aa18.03■□□□□ 0.48
SMARCA4-214ENST00000589677 NASPP49321 788 aaPredicted RBP18.02■□□□□ 0.48
SMARCA4-214ENST00000589677 ZKSCAN2Q63HK3 967 aa18.02■□□□□ 0.48
SMARCA4-214ENST00000589677 SENP3Q9H4L4 574 aaPredicted RBP18.02■□□□□ 0.48
SMARCA4-214ENST00000589677 TRIM6-TRIM34B2RNG4 842 aa18.02■□□□□ 0.48
SMARCA4-214ENST00000589677 DIAPH3Q9NSV4 1193 aa18.02■□□□□ 0.48
SMARCA4-214ENST00000589677 ANKRD30AQ9BXX3 1397 aa18.02■□□□□ 0.48
SMARCA4-214ENST00000589677 CNTLNQ9NXG0 1405 aa18.02■□□□□ 0.47
SMARCA4-214ENST00000589677 GOLGA6L19H0YKK7 550 aa18.01■□□□□ 0.47
SMARCA4-214ENST00000589677 SRPK2P78362 688 aaKnown RBP18.01■□□□□ 0.47
SMARCA4-214ENST00000589677 FOXD4L5Q5VV16 416 aaPredicted RBP18.01■□□□□ 0.47
SMARCA4-214ENST00000589677 FOXD4L4Q8WXT5 416 aaPredicted RBP18.01■□□□□ 0.47
SMARCA4-214ENST00000589677 RTF1Q92541 710 aaKnown RBP18.01■□□□□ 0.47
SMARCA4-214ENST00000589677 TRAK2O60296 914 aa18.01■□□□□ 0.47
SMARCA4-214ENST00000589677 FRAT2O75474 233 aaPredicted RBP18.01■□□□□ 0.47
SMARCA4-214ENST00000589677 COG6Q9Y2V7 657 aa18■□□□□ 0.47
SMARCA4-214ENST00000589677 NOC3LQ8WTT2 800 aaKnown RBP18■□□□□ 0.47
SMARCA4-214ENST00000589677 NOL8Q76FK4 1167 aaKnown RBP17.99■□□□□ 0.47
SMARCA4-214ENST00000589677 PODXL2Q9NZ53 605 aa17.99■□□□□ 0.47
SMARCA4-214ENST00000589677 CCDC173Q0VFZ6 552 aa17.99■□□□□ 0.47
SMARCA4-214ENST00000589677 HDGFL2Q7Z4V5 671 aaPredicted RBP17.98■□□□□ 0.47
SMARCA4-214ENST00000589677 GPATCH3Q96I76 525 aa17.98■□□□□ 0.47
SMARCA4-214ENST00000589677 C22orf23Q9BZE7 217 aa17.98■□□□□ 0.47
SMARCA4-214ENST00000589677 KIF3AQ9Y496 699 aa17.98■□□□□ 0.47
SMARCA4-214ENST00000589677 CCDC7Q96M83 1385 aa17.98■□□□□ 0.47
SMARCA4-214ENST00000589677 FANCD2Q9BXW9 1451 aa17.98■□□□□ 0.47
SMARCA4-214ENST00000589677 A0A0U1RQG5 324 aaPredicted RBP17.97■□□□□ 0.47
SMARCA4-214ENST00000589677 CCDC66A2RUB6 948 aa17.97■□□□□ 0.47
SMARCA4-214ENST00000589677 ANKRD45Q5TZF3 282 aa17.97■□□□□ 0.47
SMARCA4-214ENST00000589677 BACH2Q9BYV9 841 aa17.97■□□□□ 0.47
SMARCA4-214ENST00000589677 ST20-MTHFSA0A0A6YYL1 179 aa17.97■□□□□ 0.47
SMARCA4-214ENST00000589677 CHMP4AQ9BY43 222 aa17.97■□□□□ 0.47
SMARCA4-214ENST00000589677 TPM3P06753 285 aa17.97■□□□□ 0.47
SMARCA4-214ENST00000589677 USP47Q96K76 1375 aa17.96■□□□□ 0.47
SMARCA4-214ENST00000589677 BECN2A8MW95 431 aa17.96■□□□□ 0.47
SMARCA4-214ENST00000589677 HMGN5P82970 282 aaKnown RBP17.96■□□□□ 0.47
SMARCA4-214ENST00000589677 REC8O95072 547 aa17.96■□□□□ 0.46
SMARCA4-214ENST00000589677 PANK3Q9H999 370 aa17.96■□□□□ 0.46
SMARCA4-214ENST00000589677 MSH5O43196 834 aa17.95■□□□□ 0.46
SMARCA4-214ENST00000589677 DDX19BQ9UMR2 479 aa17.95■□□□□ 0.46
SMARCA4-214ENST00000589677 ZNF592Q92610 1267 aa17.95■□□□□ 0.46
SMARCA4-214ENST00000589677 HDAC5Q9UQL6 1122 aa17.95■□□□□ 0.46
SMARCA4-214ENST00000589677 NOM1Q5C9Z4 860 aaKnown RBP17.94■□□□□ 0.46
SMARCA4-214ENST00000589677 CCDC18Q5T9S5 1454 aa17.94■□□□□ 0.46
SMARCA4-214ENST00000589677 HSP90B1P14625 803 aaKnown RBP17.94■□□□□ 0.46
SMARCA4-214ENST00000589677 LMOD3Q0VAK6 560 aa17.93■□□□□ 0.46
SMARCA4-214ENST00000589677 STK31Q9BXU1 1019 aa17.93■□□□□ 0.46
SMARCA4-214ENST00000589677 ARGLU1Q9NWB6 273 aaPredicted RBP17.92■□□□□ 0.46
SMARCA4-214ENST00000589677 FHOD3Q2V2M9 1422 aa17.92■□□□□ 0.46
SMARCA4-214ENST00000589677 MCTP1Q6DN14 999 aa17.92■□□□□ 0.46
SMARCA4-214ENST00000589677 UBE2Q2Q8WVN8 375 aa17.91■□□□□ 0.46
SMARCA4-214ENST00000589677 CHMP4CQ96CF2 233 aa17.9■□□□□ 0.46
SMARCA4-214ENST00000589677 RUSC2Q8N2Y8 1516 aa17.9■□□□□ 0.46
SMARCA4-214ENST00000589677 NCAPD3P42695 1498 aa17.89■□□□□ 0.45
SMARCA4-214ENST00000589677 BRD4O60885 1362 aaPredicted RBP17.89■□□□□ 0.45
SMARCA4-214ENST00000589677 SF3A1Q15459 793 aaKnown RBP17.88■□□□□ 0.45
SMARCA4-214ENST00000589677 KIF7Q2M1P5 1343 aa17.88■□□□□ 0.45
SMARCA4-214ENST00000589677 DZIP1LQ8IYY4 767 aaKnown RBP17.88■□□□□ 0.45
SMARCA4-214ENST00000589677 BCL2L13Q9BXK5 485 aa17.87■□□□□ 0.45
SMARCA4-214ENST00000589677 CCAR2Q8N163 923 aaKnown RBP17.87■□□□□ 0.45
SMARCA4-214ENST00000589677 APAF1O14727 1248 aa17.86■□□□□ 0.45
SMARCA4-214ENST00000589677 RBM10P98175 930 aaKnown RBP17.86■□□□□ 0.45
SMARCA4-214ENST00000589677 GRPEL1Q9HAV7 217 aa17.86■□□□□ 0.45
SMARCA4-214ENST00000589677 CWC15Q9P013 229 aaKnown RBP17.86■□□□□ 0.45
SMARCA4-214ENST00000589677 ESPNB1AK53 854 aa17.86■□□□□ 0.45
SMARCA4-214ENST00000589677 H3BQV1 296 aa17.86■□□□□ 0.45
SMARCA4-214ENST00000589677 IFFO2Q5TF58 517 aa17.86■□□□□ 0.45
SMARCA4-214ENST00000589677 SPAG9O60271 1321 aaKnown RBP17.86■□□□□ 0.45
SMARCA4-214ENST00000589677 TULP1O00294 542 aaPredicted RBP17.85■□□□□ 0.45
SMARCA4-214ENST00000589677 MBD3O95983 291 aa17.85■□□□□ 0.45
SMARCA4-214ENST00000589677 IFT57Q9NWB7 429 aa17.85■□□□□ 0.45
SMARCA4-214ENST00000589677 RRP7AQ9Y3A4 280 aaKnown RBP17.85■□□□□ 0.45
SMARCA4-214ENST00000589677 CCDC70Q6NSX1 233 aa17.85■□□□□ 0.45
SMARCA4-214ENST00000589677 SMG6Q86US8 1419 aaKnown RBP17.85■□□□□ 0.45
SMARCA4-214ENST00000589677 FOXD4L6Q3SYB3 417 aaPredicted RBP17.85■□□□□ 0.45
SMARCA4-214ENST00000589677 FOXD4L3Q6VB84 417 aaPredicted RBP17.85■□□□□ 0.45
SMARCA4-214ENST00000589677 LETM1O95202 739 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms