RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 ARID3AQ99856 593 aa8.25□□□□□ -1.09
AP000547.3-204ENST00000588548 GRPEL1Q9HAV7 217 aa8.25□□□□□ -1.09
AP000547.3-204ENST00000588548 CGNQ9P2M7 1197 aaKnown RBP8.25□□□□□ -1.09
AP000547.3-204ENST00000588548 CERS3Q8IU89 383 aa8.25□□□□□ -1.09
AP000547.3-204ENST00000588548 PTMAP06454 111 aaKnown RBP8.24□□□□□ -1.09
AP000547.3-204ENST00000588548 ZSCAN30Q86W11 494 aa8.24□□□□□ -1.09
AP000547.3-204ENST00000588548 YY1AP1Q9H869 796 aa8.24□□□□□ -1.09
AP000547.3-204ENST00000588548 R3HCC1Q9Y3T6 440 aaKnown RBP8.24□□□□□ -1.09
AP000547.3-204ENST00000588548 CFTRP13569 1480 aa8.24□□□□□ -1.09
AP000547.3-204ENST00000588548 VPS8Q8N3P4 1428 aa8.24□□□□□ -1.09
AP000547.3-204ENST00000588548 NGEFQ8N5V2 710 aa8.24□□□□□ -1.09
AP000547.3-204ENST00000588548 BIVM-ERCC5R4GMW8 1640 aa8.23□□□□□ -1.09
AP000547.3-204ENST00000588548 APPP05067 770 aa8.23□□□□□ -1.09
AP000547.3-204ENST00000588548 FAM9BQ8IZU0 186 aa8.23□□□□□ -1.09
AP000547.3-204ENST00000588548 GEMIN8Q9NWZ8 242 aaKnown RBP8.23□□□□□ -1.09
AP000547.3-204ENST00000588548 PTMSP20962 102 aa8.22□□□□□ -1.09
AP000547.3-204ENST00000588548 TMED8Q6PL24 325 aaPredicted RBP8.22□□□□□ -1.09
AP000547.3-204ENST00000588548 TICAM2Q86XR7 235 aa8.22□□□□□ -1.09
AP000547.3-204ENST00000588548 EXOC6Q8TAG9 804 aa8.22□□□□□ -1.09
AP000547.3-204ENST00000588548 PATL2C9JE40 543 aaKnown RBP8.21□□□□□ -1.1
AP000547.3-204ENST00000588548 PRXQ9BXM0 1461 aa8.21□□□□□ -1.1
AP000547.3-204ENST00000588548 AEBP1Q8IUX7 1158 aa8.21□□□□□ -1.1
AP000547.3-204ENST00000588548 FOXD4L1Q9NU39 408 aa8.21□□□□□ -1.1
AP000547.3-204ENST00000588548 CBX1P83916 185 aa8.2□□□□□ -1.1
AP000547.3-204ENST00000588548 RALBP1Q15311 655 aa8.2□□□□□ -1.1
AP000547.3-204ENST00000588548 ANTXR1Q9H6X2 564 aa8.2□□□□□ -1.1
AP000547.3-204ENST00000588548 RRBP1Q9P2E9 1410 aaKnown RBP8.2□□□□□ -1.1
AP000547.3-204ENST00000588548 KCNJ4P48050 445 aa8.2□□□□□ -1.1
AP000547.3-204ENST00000588548 FAM161AQ3B820 660 aa8.2□□□□□ -1.1
AP000547.3-204ENST00000588548 PPP1R9BQ96SB3 815 aa8.2□□□□□ -1.1
AP000547.3-204ENST00000588548 P3H3Q8IVL6 736 aa8.19□□□□□ -1.1
AP000547.3-204ENST00000588548 GZF1Q9H116 711 aaPredicted RBP8.19□□□□□ -1.1
AP000547.3-204ENST00000588548 VIRMAQ69YN4 1812 aaKnown RBP8.19□□□□□ -1.1
AP000547.3-204ENST00000588548 ZNF500O60304 480 aaPredicted RBP8.19□□□□□ -1.1
AP000547.3-204ENST00000588548 MSNP26038 577 aaKnown RBP8.19□□□□□ -1.1
AP000547.3-204ENST00000588548 MCM4P33991 863 aa8.19□□□□□ -1.1
AP000547.3-204ENST00000588548 C8orf34Q49A92 452 aa8.19□□□□□ -1.1
AP000547.3-204ENST00000588548 MRS2Q9HD23 443 aa8.19□□□□□ -1.1
AP000547.3-204ENST00000588548 PHF14O94880 888 aa8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 RRP1P56182 461 aaKnown RBP8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 CCDC173Q0VFZ6 552 aa8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 NCOA2Q15596 1464 aa8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 BECN1Q14457 450 aa8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 KANK4Q5T7N3 995 aaPredicted RBP8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 SASS6Q6UVJ0 657 aa8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 CHMP4CQ96CF2 233 aa8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 CARD10Q9BWT7 1032 aa8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.18□□□□□ -1.1
AP000547.3-204ENST00000588548 TRAK2O60296 914 aa8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 MCCP23508 829 aa8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 FAM43BQ6ZT52 329 aaPredicted RBP8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 TAOK2Q9UL54 1235 aa8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 CCDC9Q9Y3X0 531 aaKnown RBP8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 ARAP1Q96P48 1450 aa8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 CADPSQ9ULU8 1353 aa8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 ATP2B3Q16720 1220 aa8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 CC2D1BQ5T0F9 858 aaKnown RBP8.17□□□□□ -1.1
AP000547.3-204ENST00000588548 RAB3GAP2Q9H2M9 1393 aa8.16□□□□□ -1.1
AP000547.3-204ENST00000588548 TULP2O00295 520 aa8.16□□□□□ -1.1
AP000547.3-204ENST00000588548 PRKRIP1Q9H875 184 aaPredicted RBP8.16□□□□□ -1.1
AP000547.3-204ENST00000588548 KIF27Q86VH2 1401 aa8.16□□□□□ -1.1
AP000547.3-204ENST00000588548 CNTLNQ9NXG0 1405 aa8.16□□□□□ -1.1
AP000547.3-204ENST00000588548 CSPP1Q1MSJ5 1256 aa8.15□□□□□ -1.1
AP000547.3-204ENST00000588548 HS1BP3Q53T59 392 aa8.15□□□□□ -1.1
AP000547.3-204ENST00000588548 POLR3GLQ9BT43 218 aa8.15□□□□□ -1.1
AP000547.3-204ENST00000588548 NBPF1Q3BBV0 1214 aa8.15□□□□□ -1.1
AP000547.3-204ENST00000588548 SKAP1Q86WV1 359 aa8.15□□□□□ -1.1
AP000547.3-204ENST00000588548 PRR29P0C7W0 189 aa8.14□□□□□ -1.11
AP000547.3-204ENST00000588548 CAPN2P17655 700 aa8.14□□□□□ -1.11
AP000547.3-204ENST00000588548 SLKQ9H2G2 1235 aaPredicted RBP8.14□□□□□ -1.11
AP000547.3-204ENST00000588548 TSPYL1Q9H0U9 437 aa8.14□□□□□ -1.11
AP000547.3-204ENST00000588548 ERICH3Q5RHP9 1530 aa8.14□□□□□ -1.11
AP000547.3-204ENST00000588548 IGF1RP08069 1367 aa8.14□□□□□ -1.11
AP000547.3-204ENST00000588548 TRIM6-TRIM34B2RNG4 842 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 ZNF771Q7L3S4 317 aaPredicted RBP8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 EGFL6Q8IUX8 553 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 ZNF710Q8N1W2 664 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 ZBTB9Q96C00 473 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 TRIM34Q9BYJ4 488 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 EFCC1Q9HA90 598 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 KTN1Q86UP2 1357 aaKnown RBP8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 GAS2L3Q86XJ1 694 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 CEP120Q8N960 986 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 TIGD1Q96MW7 591 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 FHAD1B1AJZ9 1412 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 NESP48681 1621 aa8.13□□□□□ -1.11
AP000547.3-204ENST00000588548 CCDC66A2RUB6 948 aa8.12□□□□□ -1.11
AP000547.3-204ENST00000588548 PLCD4Q9BRC7 762 aa8.12□□□□□ -1.11
AP000547.3-204ENST00000588548 NOL7Q9UMY1 257 aaKnown RBP8.12□□□□□ -1.11
AP000547.3-204ENST00000588548 USP19O94966 1318 aa8.12□□□□□ -1.11
AP000547.3-204ENST00000588548 MYRIPQ8NFW9 859 aa8.12□□□□□ -1.11
AP000547.3-204ENST00000588548 FGD5Q6ZNL6 1462 aa8.12□□□□□ -1.11
AP000547.3-204ENST00000588548 LOC102724159A0A0B4J2E5 919 aa8.11□□□□□ -1.11
AP000547.3-204ENST00000588548 PWP2Q15269 919 aaKnown RBP8.11□□□□□ -1.11
AP000547.3-204ENST00000588548 ARHGAP35Q9NRY4 1499 aa8.11□□□□□ -1.11
AP000547.3-204ENST00000588548 XPCQ01831 940 aaPredicted RBP8.11□□□□□ -1.11
AP000547.3-204ENST00000588548 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.11□□□□□ -1.11
AP000547.3-204ENST00000588548 KIF3AQ9Y496 699 aa8.11□□□□□ -1.11
AP000547.3-204ENST00000588548 KDM2BQ8NHM5 1336 aa8.1□□□□□ -1.11
AP000547.3-204ENST00000588548 IGSF3O75054 1194 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms