RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 AMPHP49418 695 aa20.45■□□□□ 0.86
ERBB2-214ENST00000583038 STAC3Q96MF2 364 aa20.45■□□□□ 0.86
ERBB2-214ENST00000583038 SMARCA4P51532 1647 aa20.44■□□□□ 0.86
ERBB2-214ENST00000583038 GORABQ5T7V8 394 aa20.44■□□□□ 0.86
ERBB2-214ENST00000583038 MFAP1P55081 439 aaKnown RBP20.44■□□□□ 0.86
ERBB2-214ENST00000583038 CLUAP1Q96AJ1 413 aa20.44■□□□□ 0.86
ERBB2-214ENST00000583038 PTPRGP23470 1445 aa20.43■□□□□ 0.86
ERBB2-214ENST00000583038 PANK3Q9H999 370 aa20.43■□□□□ 0.86
ERBB2-214ENST00000583038 TRAK1Q9UPV9 953 aa20.43■□□□□ 0.86
ERBB2-214ENST00000583038 CGNL1Q0VF96 1302 aa20.43■□□□□ 0.86
ERBB2-214ENST00000583038 CCDC146Q8IYE0 955 aa20.43■□□□□ 0.86
ERBB2-214ENST00000583038 E9PSI1 815 aa20.42■□□□□ 0.86
ERBB2-214ENST00000583038 CENPQQ7L2Z9 268 aaPredicted RBP20.42■□□□□ 0.86
ERBB2-214ENST00000583038 FANCD2Q9BXW9 1451 aa20.42■□□□□ 0.86
ERBB2-214ENST00000583038 ZBED9Q6R2W3 1325 aa20.41■□□□□ 0.86
ERBB2-214ENST00000583038 TSHZ2Q9NRE2 1034 aa20.41■□□□□ 0.86
ERBB2-214ENST00000583038 EVC2Q86UK5 1308 aa20.41■□□□□ 0.86
ERBB2-214ENST00000583038 TRIM6-TRIM34B2RNG4 842 aa20.41■□□□□ 0.86
ERBB2-214ENST00000583038 KIF3AQ9Y496 699 aa20.41■□□□□ 0.86
ERBB2-214ENST00000583038 ST18O60284 1047 aa20.4■□□□□ 0.86
ERBB2-214ENST00000583038 USP47Q96K76 1375 aa20.39■□□□□ 0.86
ERBB2-214ENST00000583038 TPM4P67936 248 aa20.39■□□□□ 0.85
ERBB2-214ENST00000583038 TAF7LQ5H9L4 462 aa20.39■□□□□ 0.85
ERBB2-214ENST00000583038 SLC4A10Q6U841 1118 aa20.39■□□□□ 0.85
ERBB2-214ENST00000583038 ZNF330Q9Y3S2 320 aaPredicted RBP20.38■□□□□ 0.85
ERBB2-214ENST00000583038 MYOM3Q5VTT5 1437 aa20.38■□□□□ 0.85
ERBB2-214ENST00000583038 GOLGA6L3A6NEY3 463 aa20.37■□□□□ 0.85
ERBB2-214ENST00000583038 ISY1Q9ULR0 285 aaKnown RBP20.37■□□□□ 0.85
ERBB2-214ENST00000583038 CHMP4CQ96CF2 233 aa20.37■□□□□ 0.85
ERBB2-214ENST00000583038 USP35Q9P2H5 1018 aa20.36■□□□□ 0.85
ERBB2-214ENST00000583038 ZKSCAN2Q63HK3 967 aa20.36■□□□□ 0.85
ERBB2-214ENST00000583038 TMX4Q9H1E5 349 aaPredicted RBP20.35■□□□□ 0.85
ERBB2-214ENST00000583038 COG3Q96JB2 828 aa20.34■□□□□ 0.85
ERBB2-214ENST00000583038 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.34■□□□□ 0.85
ERBB2-214ENST00000583038 CHMP3Q9Y3E7 222 aa20.34■□□□□ 0.85
ERBB2-214ENST00000583038 GZF1Q9H116 711 aaPredicted RBP20.33■□□□□ 0.85
ERBB2-214ENST00000583038 PHF14O94880 888 aa20.33■□□□□ 0.84
ERBB2-214ENST00000583038 FAM161AQ3B820 660 aa20.32■□□□□ 0.84
ERBB2-214ENST00000583038 RUSC2Q8N2Y8 1516 aa20.31■□□□□ 0.84
ERBB2-214ENST00000583038 RRP1P56182 461 aaKnown RBP20.31■□□□□ 0.84
ERBB2-214ENST00000583038 KIF16BQ96L93 1317 aa20.31■□□□□ 0.84
ERBB2-214ENST00000583038 NUTM2DQ5VT03 806 aaPredicted RBP20.3■□□□□ 0.84
ERBB2-214ENST00000583038 DDX11L8A8MPP1 907 aa20.3■□□□□ 0.84
ERBB2-214ENST00000583038 HSP90B1P14625 803 aaKnown RBP20.29■□□□□ 0.84
ERBB2-214ENST00000583038 IGF1RP08069 1367 aa20.29■□□□□ 0.84
ERBB2-214ENST00000583038 GAPVD1Q14C86 1478 aa20.27■□□□□ 0.83
ERBB2-214ENST00000583038 RRP7AQ9Y3A4 280 aaKnown RBP20.27■□□□□ 0.83
ERBB2-214ENST00000583038 ATP6V1DQ9Y5K8 247 aa20.27■□□□□ 0.83
ERBB2-214ENST00000583038 CUX1P39880 1505 aa20.26■□□□□ 0.83
ERBB2-214ENST00000583038 PDE4AP27815 886 aa20.26■□□□□ 0.83
ERBB2-214ENST00000583038 DDX19BQ9UMR2 479 aa20.26■□□□□ 0.83
ERBB2-214ENST00000583038 FGD6Q6ZV73 1430 aa20.25■□□□□ 0.83
ERBB2-214ENST00000583038 LTV1Q96GA3 475 aaPredicted RBP20.25■□□□□ 0.83
ERBB2-214ENST00000583038 API5Q9BZZ5 524 aaKnown RBP20.24■□□□□ 0.83
ERBB2-214ENST00000583038 AAMPQ13685 434 aa20.24■□□□□ 0.83
ERBB2-214ENST00000583038 CLSTN1O94985 981 aa20.24■□□□□ 0.83
ERBB2-214ENST00000583038 LRRFIP1Q32MZ4 808 aaKnown RBP20.23■□□□□ 0.83
ERBB2-214ENST00000583038 TEFQ10587 303 aa20.23■□□□□ 0.83
ERBB2-214ENST00000583038 APAF1O14727 1248 aa20.23■□□□□ 0.83
ERBB2-214ENST00000583038 SKOR2Q2VWA4 1001 aaPredicted RBP20.23■□□□□ 0.83
ERBB2-214ENST00000583038 C1orf141Q5JVX7 400 aa20.23■□□□□ 0.83
ERBB2-214ENST00000583038 DIAPH1O60610 1272 aaKnown RBP20.22■□□□□ 0.83
ERBB2-214ENST00000583038 FGD5Q6ZNL6 1462 aa20.22■□□□□ 0.83
ERBB2-214ENST00000583038 ANKRD45Q5TZF3 282 aa20.22■□□□□ 0.83
ERBB2-214ENST00000583038 MIA2Q96PC5 1412 aa20.21■□□□□ 0.83
ERBB2-214ENST00000583038 ROCK1Q13464 1354 aa20.2■□□□□ 0.82
ERBB2-214ENST00000583038 EXOC6Q8TAG9 804 aa20.2■□□□□ 0.82
ERBB2-214ENST00000583038 CCDC9Q9Y3X0 531 aaKnown RBP20.2■□□□□ 0.82
ERBB2-214ENST00000583038 REC8O95072 547 aa20.2■□□□□ 0.82
ERBB2-214ENST00000583038 NEXNQ0ZGT2 675 aa20.2■□□□□ 0.82
ERBB2-214ENST00000583038 NUTM2FA1L443 756 aa20.19■□□□□ 0.82
ERBB2-214ENST00000583038 SF3A1Q15459 793 aaKnown RBP20.19■□□□□ 0.82
ERBB2-214ENST00000583038 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.19■□□□□ 0.82
ERBB2-214ENST00000583038 RUFY2Q8WXA3 655 aa20.19■□□□□ 0.82
ERBB2-214ENST00000583038 GTF2E1P29083 439 aaPredicted RBP20.19■□□□□ 0.82
ERBB2-214ENST00000583038 CRBNQ96SW2 442 aa20.18■□□□□ 0.82
ERBB2-214ENST00000583038 ELL2O00472 640 aaPredicted RBP20.18■□□□□ 0.82
ERBB2-214ENST00000583038 COG6Q9Y2V7 657 aa20.18■□□□□ 0.82
ERBB2-214ENST00000583038 MINK1Q8N4C8 1332 aaPredicted RBP20.18■□□□□ 0.82
ERBB2-214ENST00000583038 BCL2L13Q9BXK5 485 aa20.17■□□□□ 0.82
ERBB2-214ENST00000583038 CCDC7Q96M83 1385 aa20.17■□□□□ 0.82
ERBB2-214ENST00000583038 RASSF8Q8NHQ8 419 aa20.17■□□□□ 0.82
ERBB2-214ENST00000583038 DZIP1LQ8IYY4 767 aaKnown RBP20.16■□□□□ 0.82
ERBB2-214ENST00000583038 RUNDC1Q96C34 613 aa20.16■□□□□ 0.82
ERBB2-214ENST00000583038 FRAT2O75474 233 aaPredicted RBP20.15■□□□□ 0.82
ERBB2-214ENST00000583038 RILPL2Q969X0 211 aa20.15■□□□□ 0.82
ERBB2-214ENST00000583038 CPLX2Q6PUV4 134 aaKnown RBP20.15■□□□□ 0.82
ERBB2-214ENST00000583038 NOL8Q76FK4 1167 aaKnown RBP20.15■□□□□ 0.82
ERBB2-214ENST00000583038 TOMM22Q9NS69 142 aa20.15■□□□□ 0.82
ERBB2-214ENST00000583038 PLIN1O60240 522 aa20.14■□□□□ 0.81
ERBB2-214ENST00000583038 DIAPH3Q9NSV4 1193 aa20.14■□□□□ 0.81
ERBB2-214ENST00000583038 OSCARQ8IYS5 282 aa20.14■□□□□ 0.81
ERBB2-214ENST00000583038 ANKRD50Q9ULJ7 1429 aa20.13■□□□□ 0.81
ERBB2-214ENST00000583038 DDX49Q9Y6V7 483 aaKnown RBP20.13■□□□□ 0.81
ERBB2-214ENST00000583038 FAM184AQ8NB25 1140 aa20.13■□□□□ 0.81
ERBB2-214ENST00000583038 FOXD4L1Q9NU39 408 aa20.13■□□□□ 0.81
ERBB2-214ENST00000583038 FYCO1Q9BQS8 1478 aa20.12■□□□□ 0.81
ERBB2-214ENST00000583038 ZKSCAN1P17029 563 aaPredicted RBP20.12■□□□□ 0.81
ERBB2-214ENST00000583038 H3BQV1 296 aa20.12■□□□□ 0.81
ERBB2-214ENST00000583038 RIPK4P57078 832 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms