RNA–Protein interactions for RNA: ENST00000581729.1

CTC1-209, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 3

Gene CTC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-209ENST00000581729 ZNF142P52746 1687 aaPredicted RBP7.16□□□□□ -1.26
CTC1-209ENST00000581729 KIDINS220Q9ULH0 1771 aa7.15□□□□□ -1.26
CTC1-209ENST00000581729 MYT1LQ9UL68 1186 aa7.15□□□□□ -1.26
CTC1-209ENST00000581729 PTPRKQ15262 1439 aa7.15□□□□□ -1.27
CTC1-209ENST00000581729 ABCC1P33527 1531 aa7.15□□□□□ -1.27
CTC1-209ENST00000581729 FAM9AQ8IZU1 332 aaPredicted RBP7.14□□□□□ -1.27
CTC1-209ENST00000581729 CNTLNQ9NXG0 1405 aa7.14□□□□□ -1.27
CTC1-209ENST00000581729 VWDEQ8N2E2 1590 aa7.13□□□□□ -1.27
CTC1-209ENST00000581729 SHANK2Q9UPX8 1470 aa7.13□□□□□ -1.27
CTC1-209ENST00000581729 PKD2Q13563 968 aa7.13□□□□□ -1.27
CTC1-209ENST00000581729 POTEAQ6S8J7 498 aa7.13□□□□□ -1.27
CTC1-209ENST00000581729 DCBLD2Q96PD2 775 aa7.13□□□□□ -1.27
CTC1-209ENST00000581729 CDC42BPBQ9Y5S2 1711 aa7.13□□□□□ -1.27
CTC1-209ENST00000581729 MROH2AA6NES4 1674 aa7.12□□□□□ -1.27
CTC1-209ENST00000581729 CLTCQ00610 1675 aaKnown RBP7.12□□□□□ -1.27
CTC1-209ENST00000581729 ITSN2Q9NZM3 1697 aa7.12□□□□□ -1.27
CTC1-209ENST00000581729 TOM1O60784 492 aa7.12□□□□□ -1.27
CTC1-209ENST00000581729 ESF1Q9H501 851 aaKnown RBP7.12□□□□□ -1.27
CTC1-209ENST00000581729 SETD1AO15047 1707 aaKnown RBP7.12□□□□□ -1.27
CTC1-209ENST00000581729 DNMT1P26358 1616 aaKnown RBP7.12□□□□□ -1.27
CTC1-209ENST00000581729 CPS1P31327 1500 aa7.11□□□□□ -1.27
CTC1-209ENST00000581729 TROQ12816 1431 aaPredicted RBP7.11□□□□□ -1.27
CTC1-209ENST00000581729 POTEIP0CG38 1075 aa7.11□□□□□ -1.27
CTC1-209ENST00000581729 CSRNP3Q8WYN3 585 aa7.11□□□□□ -1.27
CTC1-209ENST00000581729 SAMD9LQ8IVG5 1584 aa7.11□□□□□ -1.27
CTC1-209ENST00000581729 STRCP1A6NGW2 1772 aa7.1□□□□□ -1.27
CTC1-209ENST00000581729 LRRIQ1Q96JM4 1722 aa7.1□□□□□ -1.27
CTC1-209ENST00000581729 ATP1B4Q9UN42 357 aaPredicted RBP7.1□□□□□ -1.27
CTC1-209ENST00000581729 PLXNC1O60486 1568 aa7.1□□□□□ -1.27
CTC1-209ENST00000581729 A2ML1A8K2U0 1454 aa7.1□□□□□ -1.27
CTC1-209ENST00000581729 SUPT6HQ7KZ85 1726 aaKnown RBP7.1□□□□□ -1.27
CTC1-209ENST00000581729 PREX2Q70Z35 1606 aa7.09□□□□□ -1.27
CTC1-209ENST00000581729 CLEC11AQ9Y240 323 aa7.09□□□□□ -1.27
CTC1-209ENST00000581729 LRRC7Q96NW7 1537 aa7.08□□□□□ -1.28
CTC1-209ENST00000581729 SYCP2Q9BX26 1530 aa7.08□□□□□ -1.28
CTC1-209ENST00000581729 FBXO31Q5XUX0 539 aaPredicted RBP7.08□□□□□ -1.28
CTC1-209ENST00000581729 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.08□□□□□ -1.28
CTC1-209ENST00000581729 POLR1AO95602 1720 aaPredicted RBP7.07□□□□□ -1.28
CTC1-209ENST00000581729 ARHGAP35Q9NRY4 1499 aa7.07□□□□□ -1.28
CTC1-209ENST00000581729 CLCN6P51797 869 aa7.06□□□□□ -1.28
CTC1-209ENST00000581729 GGT6Q6P531 493 aa7.06□□□□□ -1.28
CTC1-209ENST00000581729 OTUD5Q96G74 571 aa7.06□□□□□ -1.28
CTC1-209ENST00000581729 EHMT2Q96KQ7 1210 aa7.06□□□□□ -1.28
CTC1-209ENST00000581729 INO80Q9ULG1 1556 aaPredicted RBP7.06□□□□□ -1.28
CTC1-209ENST00000581729 ATP7AQ04656 1500 aa7.06□□□□□ -1.28
CTC1-209ENST00000581729 RNF17Q9BXT8 1623 aaKnown RBP7.05□□□□□ -1.28
CTC1-209ENST00000581729 A2MP01023 1474 aa7.05□□□□□ -1.28
CTC1-209ENST00000581729 NPHP4O75161 1426 aaPredicted RBP7.05□□□□□ -1.28
CTC1-209ENST00000581729 HNRNPMP52272 730 aaKnown RBP eCLIP7.05□□□□□ -1.28
CTC1-209ENST00000581729 CDC42BPAQ5VT25 1732 aa7.04□□□□□ -1.28
CTC1-209ENST00000581729 ZNF777Q9ULD5 760 aaPredicted RBP7.04□□□□□ -1.28
CTC1-209ENST00000581729 TNRQ92752 1358 aa7.04□□□□□ -1.28
CTC1-209ENST00000581729 MED14O60244 1454 aa7.04□□□□□ -1.28
CTC1-209ENST00000581729 SPAG9O60271 1321 aaKnown RBP7.03□□□□□ -1.28
CTC1-209ENST00000581729 CLIP1P30622 1438 aa7.03□□□□□ -1.28
CTC1-209ENST00000581729 FMN1Q68DA7 1419 aa7.02□□□□□ -1.29
CTC1-209ENST00000581729 SPDYE1Q8NFV5 336 aaPredicted RBP7.02□□□□□ -1.29
CTC1-209ENST00000581729 CDK11AQ9UQ88 783 aaPredicted RBP7.02□□□□□ -1.29
CTC1-209ENST00000581729 IQGAP1P46940 1657 aa7.02□□□□□ -1.29
CTC1-209ENST00000581729 GPATCH8Q9UKJ3 1502 aaKnown RBP7.01□□□□□ -1.29
CTC1-209ENST00000581729 SYNMO15061 1565 aa7.01□□□□□ -1.29
CTC1-209ENST00000581729 PZPP20742 1482 aa7.01□□□□□ -1.29
CTC1-209ENST00000581729 ANKLE2Q86XL3 938 aa7.01□□□□□ -1.29
CTC1-209ENST00000581729 UPF1Q92900 1129 aaKnown RBP eCLIP7.01□□□□□ -1.29
CTC1-209ENST00000581729 XIRP1Q702N8 1843 aaKnown RBP7.01□□□□□ -1.29
CTC1-209ENST00000581729 DEPDC5O75140 1603 aa7.01□□□□□ -1.29
CTC1-209ENST00000581729 ZC3H13Q5T200 1668 aaKnown RBP7□□□□□ -1.29
CTC1-209ENST00000581729 UGGT1Q9NYU2 1555 aa7□□□□□ -1.29
CTC1-209ENST00000581729 ZNF644Q9H582 1327 aaPredicted RBP7□□□□□ -1.29
CTC1-209ENST00000581729 LRP6O75581 1613 aa6.99□□□□□ -1.29
CTC1-209ENST00000581729 MIA2Q96PC5 1412 aa6.99□□□□□ -1.29
CTC1-209ENST00000581729 RBM33Q96EV2 1170 aaKnown RBP6.98□□□□□ -1.29
CTC1-209ENST00000581729 MAP3K1Q13233 1512 aa6.97□□□□□ -1.29
CTC1-209ENST00000581729 KDM5DQ9BY66 1539 aa6.97□□□□□ -1.29
CTC1-209ENST00000581729 FAM135BQ49AJ0 1406 aa6.97□□□□□ -1.29
CTC1-209ENST00000581729 KIAA1107Q9UPP5 1409 aa6.97□□□□□ -1.29
CTC1-209ENST00000581729 NLRP1Q9C000 1473 aa6.97□□□□□ -1.29
CTC1-209ENST00000581729 MBD5Q9P267 1494 aa6.97□□□□□ -1.29
CTC1-209ENST00000581729 ADGBQ8N7X0 1667 aa6.96□□□□□ -1.29
CTC1-209ENST00000581729 ROBO1Q9Y6N7 1651 aa6.96□□□□□ -1.29
CTC1-209ENST00000581729 FAM135AQ9P2D6 1515 aa6.96□□□□□ -1.29
CTC1-209ENST00000581729 EEA1Q15075 1411 aa6.96□□□□□ -1.3
CTC1-209ENST00000581729 CASKIN1Q8WXD9 1431 aa6.96□□□□□ -1.3
CTC1-209ENST00000581729 CD44P16070 742 aaKnown RBP6.96□□□□□ -1.3
CTC1-209ENST00000581729 LTKP29376 864 aa6.96□□□□□ -1.3
CTC1-209ENST00000581729 TRIM52Q96A61 297 aa6.96□□□□□ -1.3
CTC1-209ENST00000581729 NCOA2Q15596 1464 aa6.96□□□□□ -1.3
CTC1-209ENST00000581729 DHX29Q7Z478 1369 aaKnown RBP6.95□□□□□ -1.3
CTC1-209ENST00000581729 KIF3BO15066 747 aa6.95□□□□□ -1.3
CTC1-209ENST00000581729 MYCNP04198 464 aaPredicted RBP6.95□□□□□ -1.3
CTC1-209ENST00000581729 THEMISQ8N1K5 641 aaPredicted RBP6.95□□□□□ -1.3
CTC1-209ENST00000581729 TMEM94Q12767 1356 aa6.95□□□□□ -1.3
CTC1-209ENST00000581729 CCDC18Q5T9S5 1454 aa6.94□□□□□ -1.3
CTC1-209ENST00000581729 UBTFP17480 764 aaKnown RBP6.94□□□□□ -1.3
CTC1-209ENST00000581729 CHADLQ6NUI6 762 aa6.94□□□□□ -1.3
CTC1-209ENST00000581729 EP400Q96L91 3159 aa6.94□□□□□ -1.3
CTC1-209ENST00000581729 ERVK-7P63135 1459 aa6.93□□□□□ -1.3
CTC1-209ENST00000581729 SCAF11Q99590 1463 aaKnown RBP6.93□□□□□ -1.3
CTC1-209ENST00000581729 CFDP1Q9UEE9 299 aaPredicted RBP6.93□□□□□ -1.3
CTC1-209ENST00000581729 WASHC2CQ9Y4E1 1318 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms