RNA–Protein interactions for RNA: ENST00000581031.5

RHOT1-209, Transcript of ras homolog family member T1, humanhuman

TSL 1 (best)

Gene RHOT1, Length 3,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-209ENST00000581031 CLASP1Q7Z460 1538 aa25.86■■□□□ 1.73
RHOT1-209ENST00000581031 PREX2Q70Z35 1606 aa25.85■■□□□ 1.73
RHOT1-209ENST00000581031 FAM135AQ9P2D6 1515 aa25.85■■□□□ 1.73
RHOT1-209ENST00000581031 SHANK2Q9UPX8 1470 aa25.84■■□□□ 1.73
RHOT1-209ENST00000581031 SPATA31E1Q6ZUB1 1445 aa25.84■■□□□ 1.73
RHOT1-209ENST00000581031 CNTLNQ9NXG0 1405 aa25.84■■□□□ 1.73
RHOT1-209ENST00000581031 CHGAP10645 457 aaKnown RBP25.83■■□□□ 1.73
RHOT1-209ENST00000581031 SALL2Q9Y467 1007 aaPredicted RBP25.83■■□□□ 1.73
RHOT1-209ENST00000581031 GGT6Q6P531 493 aa25.82■■□□□ 1.72
RHOT1-209ENST00000581031 RAPGEF3O95398 923 aa25.79■■□□□ 1.72
RHOT1-209ENST00000581031 PLA2R1Q13018 1463 aa25.78■■□□□ 1.72
RHOT1-209ENST00000581031 ASXL2Q76L83 1435 aa25.76■■□□□ 1.72
RHOT1-209ENST00000581031 ARHGEF5Q12774 1597 aa25.75■■□□□ 1.71
RHOT1-209ENST00000581031 NUTM2DQ5VT03 806 aaPredicted RBP25.75■■□□□ 1.71
RHOT1-209ENST00000581031 FANCAO15360 1455 aa25.73■■□□□ 1.71
RHOT1-209ENST00000581031 MYO5CQ9NQX4 1742 aa25.72■■□□□ 1.71
RHOT1-209ENST00000581031 NEFLP07196 543 aa25.72■■□□□ 1.71
RHOT1-209ENST00000581031 CC2D1BQ5T0F9 858 aaKnown RBP25.72■■□□□ 1.71
RHOT1-209ENST00000581031 WDR7Q9Y4E6 1490 aa25.71■■□□□ 1.71
RHOT1-209ENST00000581031 BCORL1Q5H9F3 1711 aa25.67■■□□□ 1.7
RHOT1-209ENST00000581031 TMC1Q8TDI8 760 aa25.66■■□□□ 1.7
RHOT1-209ENST00000581031 ADGRL1O94910 1474 aa25.65■■□□□ 1.7
RHOT1-209ENST00000581031 UHRF1BP1LA0JNW5 1464 aa25.63■■□□□ 1.69
RHOT1-209ENST00000581031 A2MP01023 1474 aa25.61■■□□□ 1.69
RHOT1-209ENST00000581031 DHX29Q7Z478 1369 aaKnown RBP25.6■■□□□ 1.69
RHOT1-209ENST00000581031 ABCC1P33527 1531 aa25.6■■□□□ 1.69
RHOT1-209ENST00000581031 PRAG1Q86YV5 1406 aa25.58■■□□□ 1.69
RHOT1-209ENST00000581031 DUOX2Q9NRD8 1548 aa25.58■■□□□ 1.69
RHOT1-209ENST00000581031 CFAP70Q5T0N1 1121 aa25.57■■□□□ 1.68
RHOT1-209ENST00000581031 PANK3Q9H999 370 aa25.57■■□□□ 1.68
RHOT1-209ENST00000581031 RALGAPBQ86X10 1494 aa25.56■■□□□ 1.68
RHOT1-209ENST00000581031 DISP3Q9P2K9 1392 aa25.56■■□□□ 1.68
RHOT1-209ENST00000581031 UHRF1BP1Q6BDS2 1440 aa25.55■■□□□ 1.68
RHOT1-209ENST00000581031 CD109Q6YHK3 1445 aa25.55■■□□□ 1.68
RHOT1-209ENST00000581031 KDM5DQ9BY66 1539 aa25.54■■□□□ 1.68
RHOT1-209ENST00000581031 KDM5CP41229 1560 aa25.53■■□□□ 1.68
RHOT1-209ENST00000581031 TESK2Q96S53 571 aa25.53■■□□□ 1.68
RHOT1-209ENST00000581031 ERBINQ96RT1 1412 aa25.51■■□□□ 1.67
RHOT1-209ENST00000581031 UGGT1Q9NYU2 1555 aa25.51■■□□□ 1.67
RHOT1-209ENST00000581031 CFAP65Q6ZU64 1925 aaKnown RBP25.51■■□□□ 1.67
RHOT1-209ENST00000581031 ADGRF5Q8IZF2 1346 aa25.5■■□□□ 1.67
RHOT1-209ENST00000581031 WASHC2CQ9Y4E1 1318 aa25.49■■□□□ 1.67
RHOT1-209ENST00000581031 KANK1Q14678 1352 aa25.49■■□□□ 1.67
RHOT1-209ENST00000581031 TMEM132EQ6IEE7 984 aa25.48■■□□□ 1.67
RHOT1-209ENST00000581031 SAFB2Q14151 953 aaKnown RBP eCLIP25.46■■□□□ 1.67
RHOT1-209ENST00000581031 ZFYVE16Q7Z3T8 1539 aa25.46■■□□□ 1.67
RHOT1-209ENST00000581031 MLECQ14165 292 aa25.45■■□□□ 1.67
RHOT1-209ENST00000581031 FAM69CQ0P6D2 419 aa25.45■■□□□ 1.66
RHOT1-209ENST00000581031 TMF1P82094 1093 aa25.44■■□□□ 1.66
RHOT1-209ENST00000581031 ATP7AQ04656 1500 aa25.43■■□□□ 1.66
RHOT1-209ENST00000581031 MAST1Q9Y2H9 1570 aa25.43■■□□□ 1.66
RHOT1-209ENST00000581031 PNISRQ8TF01 805 aaKnown RBP25.43■■□□□ 1.66
RHOT1-209ENST00000581031 TRAK1Q9UPV9 953 aa25.42■■□□□ 1.66
RHOT1-209ENST00000581031 PLXNC1O60486 1568 aa25.42■■□□□ 1.66
RHOT1-209ENST00000581031 ATP10AO60312 1499 aa25.41■■□□□ 1.66
RHOT1-209ENST00000581031 UNC13BO14795 1591 aa25.41■■□□□ 1.66
RHOT1-209ENST00000581031 TSHZ2Q9NRE2 1034 aa25.39■■□□□ 1.65
RHOT1-209ENST00000581031 PER1O15534 1290 aaPredicted RBP25.38■■□□□ 1.65
RHOT1-209ENST00000581031 IQGAP3Q86VI3 1631 aa25.38■■□□□ 1.65
RHOT1-209ENST00000581031 B4GALNT3Q6L9W6 998 aa25.37■■□□□ 1.65
RHOT1-209ENST00000581031 RTEL1-TNFRSF6BF6WH68 1400 aa25.36■■□□□ 1.65
RHOT1-209ENST00000581031 TNNT2P45379 298 aaPredicted RBP25.36■■□□□ 1.65
RHOT1-209ENST00000581031 PLPPR3Q6T4P5 718 aa25.34■■□□□ 1.65
RHOT1-209ENST00000581031 ZBED9Q6R2W3 1325 aa25.34■■□□□ 1.65
RHOT1-209ENST00000581031 E9PCH4 1651 aa25.33■■□□□ 1.65
RHOT1-209ENST00000581031 MYBBP1AQ9BQG0 1328 aaKnown RBP25.32■■□□□ 1.64
RHOT1-209ENST00000581031 STK26Q9P289 416 aa25.32■■□□□ 1.64
RHOT1-209ENST00000581031 ARID4BQ4LE39 1312 aaPredicted RBP25.31■■□□□ 1.64
RHOT1-209ENST00000581031 KTN1Q86UP2 1357 aaKnown RBP25.31■■□□□ 1.64
RHOT1-209ENST00000581031 FBXO31Q5XUX0 539 aaPredicted RBP25.31■■□□□ 1.64
RHOT1-209ENST00000581031 PELP1Q8IZL8 1130 aaKnown RBP25.31■■□□□ 1.64
RHOT1-209ENST00000581031 ABCA9Q8IUA7 1624 aa25.31■■□□□ 1.64
RHOT1-209ENST00000581031 KNSTRNQ9Y448 316 aa25.3■■□□□ 1.64
RHOT1-209ENST00000581031 CDCA7LQ96GN5 454 aa25.28■■□□□ 1.64
RHOT1-209ENST00000581031 TRPM1Q7Z4N2 1603 aa25.28■■□□□ 1.64
RHOT1-209ENST00000581031 MAGI2Q86UL8 1455 aa25.27■■□□□ 1.64
RHOT1-209ENST00000581031 RALBP1Q15311 655 aa25.27■■□□□ 1.64
RHOT1-209ENST00000581031 ZNF518AQ6AHZ1 1483 aa25.27■■□□□ 1.64
RHOT1-209ENST00000581031 CLTCL1P53675 1640 aa25.25■■□□□ 1.63
RHOT1-209ENST00000581031 NLRP13Q86W25 1043 aa25.25■■□□□ 1.63
RHOT1-209ENST00000581031 GPRASP1Q5JY77 1395 aa25.24■■□□□ 1.63
RHOT1-209ENST00000581031 YEATS2Q9ULM3 1422 aa25.24■■□□□ 1.63
RHOT1-209ENST00000581031 PRDM15P57071 1507 aaPredicted RBP25.24■■□□□ 1.63
RHOT1-209ENST00000581031 NOS1P29475 1434 aa25.23■■□□□ 1.63
RHOT1-209ENST00000581031 IDI1Q13907 227 aa25.22■■□□□ 1.63
RHOT1-209ENST00000581031 POGZQ7Z3K3 1410 aa25.21■■□□□ 1.63
RHOT1-209ENST00000581031 KIDINS220Q9ULH0 1771 aa25.2■■□□□ 1.63
RHOT1-209ENST00000581031 PTPRTO14522 1441 aa25.2■■□□□ 1.62
RHOT1-209ENST00000581031 CCDC146Q8IYE0 955 aa25.2■■□□□ 1.62
RHOT1-209ENST00000581031 NPATQ14207 1427 aa25.2■■□□□ 1.62
RHOT1-209ENST00000581031 INO80Q9ULG1 1556 aaPredicted RBP25.19■■□□□ 1.62
RHOT1-209ENST00000581031 ADAMTS8Q9UP79 889 aa25.19■■□□□ 1.62
RHOT1-209ENST00000581031 SLC12A5Q9H2X9 1139 aa25.18■■□□□ 1.62
RHOT1-209ENST00000581031 COL17A1Q9UMD9 1497 aaPredicted RBP25.17■■□□□ 1.62
RHOT1-209ENST00000581031 STAG3Q9UJ98 1225 aa25.17■■□□□ 1.62
RHOT1-209ENST00000581031 ARAP3Q8WWN8 1544 aa25.16■■□□□ 1.62
RHOT1-209ENST00000581031 TRPM2O94759 1503 aa25.15■■□□□ 1.62
RHOT1-209ENST00000581031 NUDCQ9Y266 331 aa25.15■■□□□ 1.62
RHOT1-209ENST00000581031 PLIN1O60240 522 aa25.13■■□□□ 1.61
RHOT1-209ENST00000581031 CARD14Q9BXL6 1004 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms