RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 PHF14O94880 888 aa8.08□□□□□ -1.12
DDX42-211ENST00000580108 TYW1BQ6NUM6 668 aa8.08□□□□□ -1.12
DDX42-211ENST00000580108 RTN4Q9NQC3 1192 aaKnown RBP8.08□□□□□ -1.12
DDX42-211ENST00000580108 DCAF1Q9Y4B6 1507 aa8.08□□□□□ -1.12
DDX42-211ENST00000580108 PPP1R3GB7ZBB8 358 aa8.07□□□□□ -1.12
DDX42-211ENST00000580108 PROX2Q3B8N5 592 aa8.07□□□□□ -1.12
DDX42-211ENST00000580108 PTPN5P54829 565 aa8.06□□□□□ -1.12
DDX42-211ENST00000580108 THSD4Q6ZMP0 1018 aa8.06□□□□□ -1.12
DDX42-211ENST00000580108 AMER1Q5JTC6 1135 aaPredicted RBP8.05□□□□□ -1.12
DDX42-211ENST00000580108 MRPL50Q8N5N7 158 aaKnown RBP8.05□□□□□ -1.12
DDX42-211ENST00000580108 FBXW7Q969H0 707 aa8.05□□□□□ -1.12
DDX42-211ENST00000580108 SPRYD3Q8NCJ5 442 aa8.04□□□□□ -1.12
DDX42-211ENST00000580108 WNT2BQ93097 391 aa8.03□□□□□ -1.12
DDX42-211ENST00000580108 DDX12PQ92771 950 aa8.02□□□□□ -1.13
DDX42-211ENST00000580108 EPAS1Q99814 870 aa8.02□□□□□ -1.13
DDX42-211ENST00000580108 NBPF3Q9H094 633 aa8.02□□□□□ -1.13
DDX42-211ENST00000580108 RABGEF1Q9UJ41 708 aa8.02□□□□□ -1.13
DDX42-211ENST00000580108 GOLGA8CPA6NN73 597 aa8.01□□□□□ -1.13
DDX42-211ENST00000580108 C6orf132Q5T0Z8 1188 aa8.01□□□□□ -1.13
DDX42-211ENST00000580108 RBM33Q96EV2 1170 aaKnown RBP8.01□□□□□ -1.13
DDX42-211ENST00000580108 PDIA6Q15084 440 aa8□□□□□ -1.13
DDX42-211ENST00000580108 PAXIP1Q6ZW49 1069 aaPredicted RBP7.99□□□□□ -1.13
DDX42-211ENST00000580108 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.99□□□□□ -1.13
DDX42-211ENST00000580108 KIAA1468Q9P260 1216 aa7.99□□□□□ -1.13
DDX42-211ENST00000580108 CFAP44Q96MT7 982 aa7.98□□□□□ -1.13
DDX42-211ENST00000580108 PRIM1P49642 420 aaKnown RBP7.97□□□□□ -1.13
DDX42-211ENST00000580108 TSR1Q2NL82 804 aaKnown RBP7.97□□□□□ -1.13
DDX42-211ENST00000580108 TRIM6-TRIM34B2RNG4 842 aa7.96□□□□□ -1.14
DDX42-211ENST00000580108 BCAMP50895 628 aa7.96□□□□□ -1.14
DDX42-211ENST00000580108 EN1Q05925 392 aaPredicted RBP7.96□□□□□ -1.14
DDX42-211ENST00000580108 NBR1Q14596 966 aa7.96□□□□□ -1.14
DDX42-211ENST00000580108 SEPT9Q9UHD8 586 aaPredicted RBP7.96□□□□□ -1.14
DDX42-211ENST00000580108 ONECUT3O60422 494 aaPredicted RBP7.95□□□□□ -1.14
DDX42-211ENST00000580108 E2F4Q16254 413 aa7.95□□□□□ -1.14
DDX42-211ENST00000580108 IFFO2Q5TF58 517 aa7.94□□□□□ -1.14
DDX42-211ENST00000580108 LAPTM4BQ86VI4 370 aa7.94□□□□□ -1.14
DDX42-211ENST00000580108 ANKK1Q8NFD2 765 aa7.94□□□□□ -1.14
DDX42-211ENST00000580108 CC2D2AQ9P2K1 1620 aa7.93□□□□□ -1.14
DDX42-211ENST00000580108 SPDYE16A6NNV3 312 aaPredicted RBP7.93□□□□□ -1.14
DDX42-211ENST00000580108 MAP3K7O43318 606 aa7.93□□□□□ -1.14
DDX42-211ENST00000580108 ZFRQ96KR1 1074 aaKnown RBP7.93□□□□□ -1.14
DDX42-211ENST00000580108 TSKSQ9UJT2 592 aa7.93□□□□□ -1.14
DDX42-211ENST00000580108 ARIH1Q9Y4X5 557 aaPredicted RBP7.93□□□□□ -1.14
DDX42-211ENST00000580108 SOWAHBA6NEL2 793 aa7.92□□□□□ -1.14
DDX42-211ENST00000580108 EIF4G1Q04637 1599 aaKnown RBP7.91□□□□□ -1.14
DDX42-211ENST00000580108 A0A0G2JS52 829 aa7.9□□□□□ -1.14
DDX42-211ENST00000580108 FAM198AQ9UFP1 575 aa7.9□□□□□ -1.14
DDX42-211ENST00000580108 GRXCR2A6NFK2 248 aa7.89□□□□□ -1.15
DDX42-211ENST00000580108 C3orf80F5H4A9 247 aa7.89□□□□□ -1.15
DDX42-211ENST00000580108 FAM98CQ17RN3 349 aaKnown RBP7.89□□□□□ -1.15
DDX42-211ENST00000580108 WBP1LQ9NX94 342 aa7.89□□□□□ -1.15
DDX42-211ENST00000580108 SHROOM4Q9ULL8 1493 aa7.88□□□□□ -1.15
DDX42-211ENST00000580108 CDHR5Q9HBB8 845 aa7.88□□□□□ -1.15
DDX42-211ENST00000580108 WDR70Q9NW82 654 aa7.88□□□□□ -1.15
DDX42-211ENST00000580108 ITGBL1O95965 494 aaPredicted RBP7.87□□□□□ -1.15
DDX42-211ENST00000580108 OSBPP22059 807 aa7.87□□□□□ -1.15
DDX42-211ENST00000580108 SMAPO00193 183 aa7.86□□□□□ -1.15
DDX42-211ENST00000580108 PRSS12P56730 875 aa7.86□□□□□ -1.15
DDX42-211ENST00000580108 CDCA7LQ96GN5 454 aa7.86□□□□□ -1.15
DDX42-211ENST00000580108 CECR2Q9BXF3 1484 aa7.86□□□□□ -1.15
DDX42-211ENST00000580108 PACS2Q86VP3 889 aa7.85□□□□□ -1.15
DDX42-211ENST00000580108 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.85□□□□□ -1.15
DDX42-211ENST00000580108 HPS5Q9UPZ3 1129 aa7.85□□□□□ -1.15
DDX42-211ENST00000580108 LRCH3Q96II8 777 aa7.84□□□□□ -1.15
DDX42-211ENST00000580108 TSHZ2Q9NRE2 1034 aa7.84□□□□□ -1.15
DDX42-211ENST00000580108 RGS20O76081 388 aa7.83□□□□□ -1.16
DDX42-211ENST00000580108 TSR3Q9UJK0 312 aaKnown RBP7.83□□□□□ -1.16
DDX42-211ENST00000580108 NYAP1Q6ZVC0 841 aa7.82□□□□□ -1.16
DDX42-211ENST00000580108 SAMD7Q7Z3H4 446 aa7.81□□□□□ -1.16
DDX42-211ENST00000580108 CERKQ8TCT0 537 aa7.8□□□□□ -1.16
DDX42-211ENST00000580108 TATDN2Q93075 761 aa7.8□□□□□ -1.16
DDX42-211ENST00000580108 NPDC1Q9NQX5 325 aaPredicted RBP7.8□□□□□ -1.16
DDX42-211ENST00000580108 TTC13Q8NBP0 860 aa7.79□□□□□ -1.16
DDX42-211ENST00000580108 PNMA3Q9UL41 463 aa7.79□□□□□ -1.16
DDX42-211ENST00000580108 NBPF26B4DH59 902 aa7.78□□□□□ -1.16
DDX42-211ENST00000580108 MLLT3P42568 568 aaPredicted RBP7.78□□□□□ -1.16
DDX42-211ENST00000580108 NUDT18Q6ZVK8 323 aa7.78□□□□□ -1.16
DDX42-211ENST00000580108 KCNV2Q8TDN2 545 aa7.78□□□□□ -1.16
DDX42-211ENST00000580108 KCNC4Q03721 635 aa7.77□□□□□ -1.17
DDX42-211ENST00000580108 PADI6Q6TGC4 694 aa7.77□□□□□ -1.17
DDX42-211ENST00000580108 RBM27Q9P2N5 1060 aaKnown RBP7.77□□□□□ -1.17
DDX42-211ENST00000580108 PPP4CP60510 307 aa7.75□□□□□ -1.17
DDX42-211ENST00000580108 TJAP1Q5JTD0 557 aa7.75□□□□□ -1.17
DDX42-211ENST00000580108 ARHGEF1Q92888 912 aaKnown RBP7.74□□□□□ -1.17
DDX42-211ENST00000580108 IRX2Q9BZI1 471 aaPredicted RBP7.74□□□□□ -1.17
DDX42-211ENST00000580108 MTRQ99707 1265 aa7.72□□□□□ -1.17
DDX42-211ENST00000580108 APLP1P51693 650 aa7.71□□□□□ -1.18
DDX42-211ENST00000580108 SWT1Q5T5J6 900 aaKnown RBP7.71□□□□□ -1.18
DDX42-211ENST00000580108 SMARCA4P51532 1647 aa7.7□□□□□ -1.18
DDX42-211ENST00000580108 RNF40O75150 1001 aa7.7□□□□□ -1.18
DDX42-211ENST00000580108 EYA1Q99502 592 aa7.7□□□□□ -1.18
DDX42-211ENST00000580108 ZNF516Q92618 1163 aa7.69□□□□□ -1.18
DDX42-211ENST00000580108 PTGDRQ13258 359 aa7.68□□□□□ -1.18
DDX42-211ENST00000580108 IL21Q9HBE4 155 aa7.67□□□□□ -1.18
DDX42-211ENST00000580108 ATAD2BQ9ULI0 1458 aa7.66□□□□□ -1.18
DDX42-211ENST00000580108 HDGFP51858 240 aaKnown RBP7.65□□□□□ -1.18
DDX42-211ENST00000580108 NKX2-3Q8TAU0 364 aa7.65□□□□□ -1.18
DDX42-211ENST00000580108 MROH2BQ7Z745 1585 aa7.64□□□□□ -1.19
DDX42-211ENST00000580108 SEMA3EO15041 775 aa7.64□□□□□ -1.19
DDX42-211ENST00000580108 FAM161AQ3B820 660 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms