RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 MIA2Q96PC5 1412 aa4.1□□□□□ -1.75
SNORD53-201ENST00000579969 STRCP1A6NGW2 1772 aa4.09□□□□□ -1.75
SNORD53-201ENST00000579969 KCNA6P17658 529 aa4.09□□□□□ -1.75
SNORD53-201ENST00000579969 YY1P25490 414 aa4.09□□□□□ -1.75
SNORD53-201ENST00000579969 LTKP29376 864 aa4.09□□□□□ -1.75
SNORD53-201ENST00000579969 CHIC1Q5VXU3 224 aa4.09□□□□□ -1.75
SNORD53-201ENST00000579969 CCDC125Q86Z20 511 aa4.09□□□□□ -1.75
SNORD53-201ENST00000579969 CSRNP3Q8WYN3 585 aa4.09□□□□□ -1.75
SNORD53-201ENST00000579969 NGLY1Q96IV0 654 aa4.09□□□□□ -1.75
SNORD53-201ENST00000579969 AFF2P51816 1311 aa4.09□□□□□ -1.75
SNORD53-201ENST00000579969 WASHC2CQ9Y4E1 1318 aa4.09□□□□□ -1.75
SNORD53-201ENST00000579969 TMEM94Q12767 1356 aa4.09□□□□□ -1.75
SNORD53-201ENST00000579969 CDK12Q9NYV4 1490 aaPredicted RBP4.09□□□□□ -1.75
SNORD53-201ENST00000579969 ABCC1P33527 1531 aa4.09□□□□□ -1.75
SNORD53-201ENST00000579969 CDK13Q14004 1512 aaKnown RBP4.09□□□□□ -1.75
SNORD53-201ENST00000579969 FAM135AQ9P2D6 1515 aa4.09□□□□□ -1.75
SNORD53-201ENST00000579969 SETBP1Q9Y6X0 1596 aa4.09□□□□□ -1.75
SNORD53-201ENST00000579969 RNF17Q9BXT8 1623 aaKnown RBP4.09□□□□□ -1.76
SNORD53-201ENST00000579969 CLTCQ00610 1675 aaKnown RBP4.09□□□□□ -1.76
SNORD53-201ENST00000579969 KIF3BO15066 747 aa4.08□□□□□ -1.76
SNORD53-201ENST00000579969 POLR1AO95602 1720 aaPredicted RBP4.08□□□□□ -1.76
SNORD53-201ENST00000579969 SAMD9Q5K651 1589 aa4.08□□□□□ -1.76
SNORD53-201ENST00000579969 KIDINS220Q9ULH0 1771 aa4.08□□□□□ -1.76
SNORD53-201ENST00000579969 EID1Q9Y6B2 187 aa4.08□□□□□ -1.76
SNORD53-201ENST00000579969 MYO5CQ9NQX4 1742 aa4.07□□□□□ -1.76
SNORD53-201ENST00000579969 UGGT1Q9NYU2 1555 aa4.07□□□□□ -1.76
SNORD53-201ENST00000579969 A2MP01023 1474 aa4.07□□□□□ -1.76
SNORD53-201ENST00000579969 TROQ12816 1431 aaPredicted RBP4.07□□□□□ -1.76
SNORD53-201ENST00000579969 ATAD2Q6PL18 1390 aa4.07□□□□□ -1.76
SNORD53-201ENST00000579969 ROBO1Q9Y6N7 1651 aa4.06□□□□□ -1.76
SNORD53-201ENST00000579969 DEPDC5O75140 1603 aa4.06□□□□□ -1.76
SNORD53-201ENST00000579969 LRP6O75581 1613 aa4.06□□□□□ -1.76
SNORD53-201ENST00000579969 KDM5DQ9BY66 1539 aa4.06□□□□□ -1.76
SNORD53-201ENST00000579969 NLRP1Q9C000 1473 aa4.06□□□□□ -1.76
SNORD53-201ENST00000579969 MSH6P52701 1360 aa4.06□□□□□ -1.76
SNORD53-201ENST00000579969 C8orf37Q96NL8 207 aa4.06□□□□□ -1.76
SNORD53-201ENST00000579969 SLC26A8Q96RN1 970 aa4.06□□□□□ -1.76
SNORD53-201ENST00000579969 IQGAP1P46940 1657 aa4.06□□□□□ -1.76
SNORD53-201ENST00000579969 RGS12O14924 1447 aa4.05□□□□□ -1.76
SNORD53-201ENST00000579969 CLIP1P30622 1438 aa4.05□□□□□ -1.76
SNORD53-201ENST00000579969 FGD6Q6ZV73 1430 aa4.05□□□□□ -1.76
SNORD53-201ENST00000579969 DHX29Q7Z478 1369 aaKnown RBP4.05□□□□□ -1.76
SNORD53-201ENST00000579969 CFDP1Q9UEE9 299 aaPredicted RBP4.05□□□□□ -1.76
SNORD53-201ENST00000579969 ITSN2Q9NZM3 1697 aa4.05□□□□□ -1.76
SNORD53-201ENST00000579969 KIF14Q15058 1648 aa4.05□□□□□ -1.76
SNORD53-201ENST00000579969 SYNMO15061 1565 aa4.05□□□□□ -1.76
SNORD53-201ENST00000579969 SAMD9LQ8IVG5 1584 aa4.05□□□□□ -1.76
SNORD53-201ENST00000579969 PZPP20742 1482 aa4.05□□□□□ -1.76
SNORD53-201ENST00000579969 PHLPP1O60346 1717 aa4.04□□□□□ -1.76
SNORD53-201ENST00000579969 CDC42BPBQ9Y5S2 1711 aa4.04□□□□□ -1.76
SNORD53-201ENST00000579969 HRCP23327 699 aa4.04□□□□□ -1.76
SNORD53-201ENST00000579969 DEFB132Q7Z7B7 95 aa4.04□□□□□ -1.76
SNORD53-201ENST00000579969 LRRC59Q96AG4 307 aaKnown RBP4.04□□□□□ -1.76
SNORD53-201ENST00000579969 BCANQ96GW7 911 aa4.04□□□□□ -1.76
SNORD53-201ENST00000579969 XIRP1Q702N8 1843 aaKnown RBP4.04□□□□□ -1.76
SNORD53-201ENST00000579969 LRRC9Q6ZRR7 1453 aa4.04□□□□□ -1.76
SNORD53-201ENST00000579969 SENP3-EIF4A1A0A087X0R7 540 aa4.03□□□□□ -1.76
SNORD53-201ENST00000579969 PSDA5PKW4 1024 aaPredicted RBP4.03□□□□□ -1.76
SNORD53-201ENST00000579969 ADAMTS2O95450 1211 aa4.03□□□□□ -1.76
SNORD53-201ENST00000579969 ATF3P18847 181 aa4.03□□□□□ -1.76
SNORD53-201ENST00000579969 SF3B2Q13435 895 aaKnown RBP4.03□□□□□ -1.76
SNORD53-201ENST00000579969 C14orf37Q86TY3 774 aa4.03□□□□□ -1.76
SNORD53-201ENST00000579969 CADPS2Q86UW7 1296 aa4.03□□□□□ -1.76
SNORD53-201ENST00000579969 C19orf44Q9H6X5 657 aa4.03□□□□□ -1.76
SNORD53-201ENST00000579969 STAG3Q9UJ98 1225 aa4.03□□□□□ -1.76
SNORD53-201ENST00000579969 USP21Q9UK80 565 aa4.03□□□□□ -1.76
SNORD53-201ENST00000579969 TRPC5Q9UL62 973 aaPredicted RBP4.03□□□□□ -1.76
SNORD53-201ENST00000579969 ATP7AQ04656 1500 aa4.03□□□□□ -1.76
SNORD53-201ENST00000579969 SCAF11Q99590 1463 aaKnown RBP4.03□□□□□ -1.76
SNORD53-201ENST00000579969 KIAA1107Q9UPP5 1409 aa4.03□□□□□ -1.76
SNORD53-201ENST00000579969 DCAF8L1A6NGE4 600 aa4.02□□□□□ -1.77
SNORD53-201ENST00000579969 FMN1Q68DA7 1419 aa4.02□□□□□ -1.77
SNORD53-201ENST00000579969 PLXNC1O60486 1568 aa4.02□□□□□ -1.77
SNORD53-201ENST00000579969 ZNF644Q9H582 1327 aaPredicted RBP4.01□□□□□ -1.77
SNORD53-201ENST00000579969 ZC3H13Q5T200 1668 aaKnown RBP4.01□□□□□ -1.77
SNORD53-201ENST00000579969 BRINP3Q76B58 766 aa4.01□□□□□ -1.77
SNORD53-201ENST00000579969 FNBP4Q8N3X1 1017 aaPredicted RBP4.01□□□□□ -1.77
SNORD53-201ENST00000579969 EHMT2Q96KQ7 1210 aa4.01□□□□□ -1.77
SNORD53-201ENST00000579969 COL16A1Q07092 1604 aaPredicted RBP4.01□□□□□ -1.77
SNORD53-201ENST00000579969 TMEM2Q9UHN6 1383 aa4.01□□□□□ -1.77
SNORD53-201ENST00000579969 PRDM15P57071 1507 aaPredicted RBP4□□□□□ -1.77
SNORD53-201ENST00000579969 GPATCH8Q9UKJ3 1502 aaKnown RBP4□□□□□ -1.77
SNORD53-201ENST00000579969 NCOA2Q15596 1464 aa4□□□□□ -1.77
SNORD53-201ENST00000579969 CFAP65Q6ZU64 1925 aaKnown RBP4□□□□□ -1.77
SNORD53-201ENST00000579969 UBTFP17480 764 aaKnown RBP4□□□□□ -1.77
SNORD53-201ENST00000579969 MYT1Q01538 1121 aa4□□□□□ -1.77
SNORD53-201ENST00000579969 MAP3K1Q13233 1512 aa4□□□□□ -1.77
SNORD53-201ENST00000579969 SYCP2Q9BX26 1530 aa4□□□□□ -1.77
SNORD53-201ENST00000579969 PREX2Q70Z35 1606 aa3.99□□□□□ -1.77
SNORD53-201ENST00000579969 PLEKHH2Q8IVE3 1493 aa3.99□□□□□ -1.77
SNORD53-201ENST00000579969 ARHGAP23Q9P227 1491 aa3.99□□□□□ -1.77
SNORD53-201ENST00000579969 EP400Q96L91 3159 aa3.99□□□□□ -1.77
SNORD53-201ENST00000579969 RTEL1-TNFRSF6BF6WH68 1400 aa3.99□□□□□ -1.77
SNORD53-201ENST00000579969 BLMP54132 1417 aaPredicted RBP3.99□□□□□ -1.77
SNORD53-201ENST00000579969 PPP1R15AO75807 674 aaPredicted RBP3.99□□□□□ -1.77
SNORD53-201ENST00000579969 C1QTNF8P60827 252 aa3.99□□□□□ -1.77
SNORD53-201ENST00000579969 IDI1Q13907 227 aa3.99□□□□□ -1.77
SNORD53-201ENST00000579969 R3HDM1Q15032 1099 aaKnown RBP3.99□□□□□ -1.77
SNORD53-201ENST00000579969 RSPH4AQ5TD94 716 aa3.99□□□□□ -1.77
SNORD53-201ENST00000579969 ZNF784Q8NCA9 323 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms