RNA–Protein interactions for RNA: ENST00000579916.5

CCDC178-208, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC178, Length 1,017 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-208ENST00000579916 DDX12PQ92771 950 aa10.85□□□□□ -0.67
CCDC178-208ENST00000579916 PSEN2P49810 448 aa10.83□□□□□ -0.68
CCDC178-208ENST00000579916 PTPREP23469 700 aa10.82□□□□□ -0.68
CCDC178-208ENST00000579916 KCNK17Q96T54 332 aa10.82□□□□□ -0.68
CCDC178-208ENST00000579916 TK2O00142 265 aa10.81□□□□□ -0.68
CCDC178-208ENST00000579916 EN1Q05925 392 aaPredicted RBP10.81□□□□□ -0.68
CCDC178-208ENST00000579916 DMRTA1Q5VZB9 504 aa10.81□□□□□ -0.68
CCDC178-208ENST00000579916 KCNH8Q96L42 1107 aa10.81□□□□□ -0.68
CCDC178-208ENST00000579916 NBR1Q14596 966 aa10.8□□□□□ -0.68
CCDC178-208ENST00000579916 SLC4A5Q9BY07 1137 aa10.8□□□□□ -0.68
CCDC178-208ENST00000579916 PPP1R3GB7ZBB8 358 aa10.78□□□□□ -0.68
CCDC178-208ENST00000579916 OSBPP22059 807 aa10.78□□□□□ -0.68
CCDC178-208ENST00000579916 C6orf132Q5T0Z8 1188 aa10.77□□□□□ -0.69
CCDC178-208ENST00000579916 GRXCR2A6NFK2 248 aa10.76□□□□□ -0.69
CCDC178-208ENST00000579916 HRO43593 1189 aa10.76□□□□□ -0.69
CCDC178-208ENST00000579916 PRIM1P49642 420 aaKnown RBP10.76□□□□□ -0.69
CCDC178-208ENST00000579916 ZBED2Q9BTP6 218 aa10.76□□□□□ -0.69
CCDC178-208ENST00000579916 MLLT3P42568 568 aaPredicted RBP10.75□□□□□ -0.69
CCDC178-208ENST00000579916 KCTD12Q96CX2 325 aaKnown RBP10.75□□□□□ -0.69
CCDC178-208ENST00000579916 COL9A1P20849 921 aa10.74□□□□□ -0.69
CCDC178-208ENST00000579916 SEMA3EO15041 775 aa10.73□□□□□ -0.69
CCDC178-208ENST00000579916 RBM33Q96EV2 1170 aaKnown RBP10.73□□□□□ -0.69
CCDC178-208ENST00000579916 VPS9D1Q9Y2B5 631 aa10.73□□□□□ -0.69
CCDC178-208ENST00000579916 TESPA1A2RU30 521 aaPredicted RBP10.72□□□□□ -0.69
CCDC178-208ENST00000579916 MAP3K7O43318 606 aa10.72□□□□□ -0.69
CCDC178-208ENST00000579916 TSR1Q2NL82 804 aaKnown RBP10.71□□□□□ -0.69
CCDC178-208ENST00000579916 BHMG1C9JSJ3 638 aaPredicted RBP10.69□□□□□ -0.7
CCDC178-208ENST00000579916 ONECUT3O60422 494 aaPredicted RBP10.69□□□□□ -0.7
CCDC178-208ENST00000579916 CERKQ8TCT0 537 aa10.68□□□□□ -0.7
CCDC178-208ENST00000579916 CDHR5Q9HBB8 845 aa10.66□□□□□ -0.7
CCDC178-208ENST00000579916 PTPN5P54829 565 aa10.65□□□□□ -0.7
CCDC178-208ENST00000579916 PROX2Q3B8N5 592 aa10.65□□□□□ -0.7
CCDC178-208ENST00000579916 RABGEF1Q9UJ41 708 aa10.65□□□□□ -0.7
CCDC178-208ENST00000579916 TRIM6-TRIM34B2RNG4 842 aa10.64□□□□□ -0.71
CCDC178-208ENST00000579916 RBM27Q9P2N5 1060 aaKnown RBP10.64□□□□□ -0.71
CCDC178-208ENST00000579916 NPDC1Q9NQX5 325 aaPredicted RBP10.63□□□□□ -0.71
CCDC178-208ENST00000579916 SMYD5Q6GMV2 418 aa10.62□□□□□ -0.71
CCDC178-208ENST00000579916 STAC3Q96MF2 364 aa10.62□□□□□ -0.71
CCDC178-208ENST00000579916 PRSS12P56730 875 aa10.61□□□□□ -0.71
CCDC178-208ENST00000579916 IRX2Q9BZI1 471 aaPredicted RBP10.61□□□□□ -0.71
CCDC178-208ENST00000579916 NBPF3Q9H094 633 aa10.61□□□□□ -0.71
CCDC178-208ENST00000579916 CDCA7LQ96GN5 454 aa10.6□□□□□ -0.71
CCDC178-208ENST00000579916 TSKSQ9UJT2 592 aa10.6□□□□□ -0.71
CCDC178-208ENST00000579916 TTC13Q8NBP0 860 aa10.59□□□□□ -0.71
CCDC178-208ENST00000579916 SLC24A1O60721 1099 aa10.58□□□□□ -0.72
CCDC178-208ENST00000579916 PTGDRQ13258 359 aa10.58□□□□□ -0.72
CCDC178-208ENST00000579916 KIAA1468Q9P260 1216 aa10.58□□□□□ -0.72
CCDC178-208ENST00000579916 LAPTM4BQ86VI4 370 aa10.57□□□□□ -0.72
CCDC178-208ENST00000579916 MRPL50Q8N5N7 158 aaKnown RBP10.57□□□□□ -0.72
CCDC178-208ENST00000579916 FAM198AQ9UFP1 575 aa10.57□□□□□ -0.72
CCDC178-208ENST00000579916 RGS20O76081 388 aa10.55□□□□□ -0.72
CCDC178-208ENST00000579916 RBM26Q5T8P6 1007 aaKnown RBP10.55□□□□□ -0.72
CCDC178-208ENST00000579916 PACS2Q86VP3 889 aa10.54□□□□□ -0.72
CCDC178-208ENST00000579916 GPR37O15354 613 aa10.53□□□□□ -0.72
CCDC178-208ENST00000579916 NUTM2FA1L443 756 aa10.52□□□□□ -0.73
CCDC178-208ENST00000579916 FCHSD2O94868 740 aa10.52□□□□□ -0.73
CCDC178-208ENST00000579916 IFFO2Q5TF58 517 aa10.52□□□□□ -0.73
CCDC178-208ENST00000579916 PADI6Q6TGC4 694 aa10.52□□□□□ -0.73
CCDC178-208ENST00000579916 A0A0G2JS52 829 aa10.51□□□□□ -0.73
CCDC178-208ENST00000579916 NBPF26B4DH59 902 aa10.51□□□□□ -0.73
CCDC178-208ENST00000579916 FAM98CQ17RN3 349 aaKnown RBP10.51□□□□□ -0.73
CCDC178-208ENST00000579916 C3orf80F5H4A9 247 aa10.5□□□□□ -0.73
CCDC178-208ENST00000579916 SEPT9Q9UHD8 586 aaPredicted RBP10.5□□□□□ -0.73
CCDC178-208ENST00000579916 HIC1Q14526 733 aa10.49□□□□□ -0.73
CCDC178-208ENST00000579916 THSD4Q6ZMP0 1018 aa10.49□□□□□ -0.73
CCDC178-208ENST00000579916 TATDN2Q93075 761 aa10.49□□□□□ -0.73
CCDC178-208ENST00000579916 TULP1O00294 542 aaPredicted RBP10.48□□□□□ -0.73
CCDC178-208ENST00000579916 ZFRQ96KR1 1074 aaKnown RBP10.48□□□□□ -0.73
CCDC178-208ENST00000579916 GOLGA8CPA6NN73 597 aa10.47□□□□□ -0.73
CCDC178-208ENST00000579916 WNT2BQ93097 391 aa10.47□□□□□ -0.73
CCDC178-208ENST00000579916 PNMA3Q9UL41 463 aa10.47□□□□□ -0.73
CCDC178-208ENST00000579916 GPIHBP1Q8IV16 184 aa10.46□□□□□ -0.73
CCDC178-208ENST00000579916 NUDT18Q6ZVK8 323 aa10.45□□□□□ -0.74
CCDC178-208ENST00000579916 ANKK1Q8NFD2 765 aa10.45□□□□□ -0.74
CCDC178-208ENST00000579916 SMAPO00193 183 aa10.44□□□□□ -0.74
CCDC178-208ENST00000579916 GNPATO15228 680 aa10.44□□□□□ -0.74
CCDC178-208ENST00000579916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.44□□□□□ -0.74
CCDC178-208ENST00000579916 EYA1Q99502 592 aa10.44□□□□□ -0.74
CCDC178-208ENST00000579916 SOWAHBA6NEL2 793 aa10.43□□□□□ -0.74
CCDC178-208ENST00000579916 ADGRG1Q9Y653 693 aa10.43□□□□□ -0.74
CCDC178-208ENST00000579916 FECHP22830 423 aa10.39□□□□□ -0.75
CCDC178-208ENST00000579916 BCAMP50895 628 aa10.39□□□□□ -0.75
CCDC178-208ENST00000579916 LMOD2Q6P5Q4 547 aa10.39□□□□□ -0.75
CCDC178-208ENST00000579916 Q6ZNB5 142 aa10.38□□□□□ -0.75
CCDC178-208ENST00000579916 RBM46Q8TBY0 533 aaKnown RBP10.38□□□□□ -0.75
CCDC178-208ENST00000579916 LRCH3Q96II8 777 aa10.38□□□□□ -0.75
CCDC178-208ENST00000579916 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.38□□□□□ -0.75
CCDC178-208ENST00000579916 SAMD7Q7Z3H4 446 aa10.37□□□□□ -0.75
CCDC178-208ENST00000579916 PXYLP1Q8TE99 480 aa10.36□□□□□ -0.75
CCDC178-208ENST00000579916 OATP04181 439 aa10.35□□□□□ -0.75
CCDC178-208ENST00000579916 DNAJB2P25686 324 aa10.35□□□□□ -0.75
CCDC178-208ENST00000579916 NYAP1Q6ZVC0 841 aa10.35□□□□□ -0.75
CCDC178-208ENST00000579916 FAM161AQ3B820 660 aa10.34□□□□□ -0.75
CCDC178-208ENST00000579916 METTL3Q86U44 580 aaKnown RBP10.34□□□□□ -0.75
CCDC178-208ENST00000579916 TSR3Q9UJK0 312 aaKnown RBP10.34□□□□□ -0.75
CCDC178-208ENST00000579916 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.33□□□□□ -0.76
CCDC178-208ENST00000579916 TMEM134Q9H6X4 195 aa10.33□□□□□ -0.76
CCDC178-208ENST00000579916 RCCD1A6NED2 376 aa10.32□□□□□ -0.76
CCDC178-208ENST00000579916 MAP2K5Q13163 448 aa10.32□□□□□ -0.76
CCDC178-208ENST00000579916 SWT1Q5T5J6 900 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms