RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 CENPQQ7L2Z9 268 aaPredicted RBP13.81□□□□□ -0.2
RNF43-203ENST00000577716 PLCB2Q00722 1185 aa13.81□□□□□ -0.2
RNF43-203ENST00000577716 HDGFL2Q7Z4V5 671 aaPredicted RBP13.81□□□□□ -0.2
RNF43-203ENST00000577716 USP35Q9P2H5 1018 aa13.81□□□□□ -0.2
RNF43-203ENST00000577716 APBB1O00213 710 aa13.8□□□□□ -0.2
RNF43-203ENST00000577716 MFAP1P55081 439 aaKnown RBP13.8□□□□□ -0.2
RNF43-203ENST00000577716 DNAJC5BQ9UF47 199 aa13.8□□□□□ -0.2
RNF43-203ENST00000577716 RRP7AQ9Y3A4 280 aaKnown RBP13.79□□□□□ -0.2
RNF43-203ENST00000577716 TIAM1Q13009 1591 aa13.79□□□□□ -0.2
RNF43-203ENST00000577716 FAM161AQ3B820 660 aa13.79□□□□□ -0.2
RNF43-203ENST00000577716 HAP1P54257 671 aaPredicted RBP13.79□□□□□ -0.2
RNF43-203ENST00000577716 APAF1O14727 1248 aa13.78□□□□□ -0.2
RNF43-203ENST00000577716 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
RNF43-203ENST00000577716 MLECQ14165 292 aa13.78□□□□□ -0.2
RNF43-203ENST00000577716 PTPRGP23470 1445 aa13.77□□□□□ -0.2
RNF43-203ENST00000577716 OS9Q13438 667 aaPredicted RBP13.77□□□□□ -0.2
RNF43-203ENST00000577716 BCL2L13Q9BXK5 485 aa13.77□□□□□ -0.2
RNF43-203ENST00000577716 GBP4Q96PP9 640 aa13.77□□□□□ -0.21
RNF43-203ENST00000577716 KCNJ4P48050 445 aa13.75□□□□□ -0.21
RNF43-203ENST00000577716 LMOD2Q6P5Q4 547 aa13.75□□□□□ -0.21
RNF43-203ENST00000577716 CFAP44Q96MT7 982 aa13.75□□□□□ -0.21
RNF43-203ENST00000577716 CALD1Q05682 793 aaKnown RBP13.75□□□□□ -0.21
RNF43-203ENST00000577716 COG6Q9Y2V7 657 aa13.75□□□□□ -0.21
RNF43-203ENST00000577716 E9PSI1 815 aa13.74□□□□□ -0.21
RNF43-203ENST00000577716 NUTM2DQ5VT03 806 aaPredicted RBP13.74□□□□□ -0.21
RNF43-203ENST00000577716 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.74□□□□□ -0.21
RNF43-203ENST00000577716 EFCAB5A4FU69 1503 aa13.74□□□□□ -0.21
RNF43-203ENST00000577716 ZRSR1Q15695 479 aaKnown RBP13.74□□□□□ -0.21
RNF43-203ENST00000577716 A0A0G2JS52 829 aa13.74□□□□□ -0.21
RNF43-203ENST00000577716 GRIN2BQ13224 1484 aa13.73□□□□□ -0.21
RNF43-203ENST00000577716 MSNP26038 577 aaKnown RBP13.73□□□□□ -0.21
RNF43-203ENST00000577716 CGNL1Q0VF96 1302 aa13.73□□□□□ -0.21
RNF43-203ENST00000577716 TERF2IPQ9NYB0 399 aa13.73□□□□□ -0.21
RNF43-203ENST00000577716 DNMBPQ6XZF7 1577 aa13.73□□□□□ -0.21
RNF43-203ENST00000577716 MCCP23508 829 aa13.72□□□□□ -0.21
RNF43-203ENST00000577716 NBPF8Q3BBV2 869 aa13.72□□□□□ -0.21
RNF43-203ENST00000577716 RTF1Q92541 710 aaKnown RBP13.72□□□□□ -0.21
RNF43-203ENST00000577716 GOLGA6L3A6NEY3 463 aa13.72□□□□□ -0.21
RNF43-203ENST00000577716 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
RNF43-203ENST00000577716 GSE1Q14687 1217 aa13.71□□□□□ -0.21
RNF43-203ENST00000577716 CCDC184Q52MB2 194 aa13.71□□□□□ -0.21
RNF43-203ENST00000577716 ABCA10Q8WWZ4 1543 aa13.71□□□□□ -0.22
RNF43-203ENST00000577716 FGD1P98174 961 aa13.71□□□□□ -0.22
RNF43-203ENST00000577716 ANKRD50Q9ULJ7 1429 aa13.71□□□□□ -0.22
RNF43-203ENST00000577716 HDGFP51858 240 aaKnown RBP13.7□□□□□ -0.22
RNF43-203ENST00000577716 WASHC2CQ9Y4E1 1318 aa13.7□□□□□ -0.22
RNF43-203ENST00000577716 HFM1A2PYH4 1435 aa13.69□□□□□ -0.22
RNF43-203ENST00000577716 CDCA7LQ96GN5 454 aa13.69□□□□□ -0.22
RNF43-203ENST00000577716 PRDM2Q13029 1718 aa13.68□□□□□ -0.22
RNF43-203ENST00000577716 BRD4O60885 1362 aaPredicted RBP13.68□□□□□ -0.22
RNF43-203ENST00000577716 GOLGA6L4A6NEF3 574 aa13.68□□□□□ -0.22
RNF43-203ENST00000577716 FOXD4L1Q9NU39 408 aa13.67□□□□□ -0.22
RNF43-203ENST00000577716 BIVM-ERCC5R4GMW8 1640 aa13.67□□□□□ -0.22
RNF43-203ENST00000577716 ZKSCAN2Q63HK3 967 aa13.67□□□□□ -0.22
RNF43-203ENST00000577716 PTMSP20962 102 aa13.67□□□□□ -0.22
RNF43-203ENST00000577716 PCF11O94913 1555 aaKnown RBP13.66□□□□□ -0.22
RNF43-203ENST00000577716 ELL2O00472 640 aaPredicted RBP13.66□□□□□ -0.22
RNF43-203ENST00000577716 MIA2Q96PC5 1412 aa13.66□□□□□ -0.22
RNF43-203ENST00000577716 ADAMTS8Q9UP79 889 aa13.65□□□□□ -0.22
RNF43-203ENST00000577716 AKNAQ7Z591 1439 aa13.65□□□□□ -0.22
RNF43-203ENST00000577716 NGEFQ8N5V2 710 aa13.65□□□□□ -0.22
RNF43-203ENST00000577716 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.64□□□□□ -0.234e-7■■□□□ 13.6
RNF43-203ENST00000577716 TAOK2Q9UL54 1235 aa13.64□□□□□ -0.23
RNF43-203ENST00000577716 PNISRQ8TF01 805 aaKnown RBP13.64□□□□□ -0.23
RNF43-203ENST00000577716 NAP1L2Q9ULW6 460 aaPredicted RBP13.64□□□□□ -0.23
RNF43-203ENST00000577716 NAIPQ13075 1403 aa13.64□□□□□ -0.23
RNF43-203ENST00000577716 MRC2Q9UBG0 1479 aa13.64□□□□□ -0.23
RNF43-203ENST00000577716 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.63□□□□□ -0.23
RNF43-203ENST00000577716 KIAA1211Q6ZU35 1233 aa13.63□□□□□ -0.23
RNF43-203ENST00000577716 EHBP1L1Q8N3D4 1523 aa13.63□□□□□ -0.23
RNF43-203ENST00000577716 PRG4Q92954 1404 aaPredicted RBP13.63□□□□□ -0.23
RNF43-203ENST00000577716 STK31Q9BXU1 1019 aa13.62□□□□□ -0.23
RNF43-203ENST00000577716 SLC4A10Q6U841 1118 aa13.62□□□□□ -0.23
RNF43-203ENST00000577716 HMMRO75330 724 aa13.62□□□□□ -0.23
RNF43-203ENST00000577716 PAK3O75914 559 aaPredicted RBP13.62□□□□□ -0.23
RNF43-203ENST00000577716 NBPF1Q3BBV0 1214 aa13.61□□□□□ -0.23
RNF43-203ENST00000577716 ANKRD45Q5TZF3 282 aa13.61□□□□□ -0.23
RNF43-203ENST00000577716 LMOD3Q0VAK6 560 aa13.61□□□□□ -0.23
RNF43-203ENST00000577716 EVC2Q86UK5 1308 aa13.6□□□□□ -0.23
RNF43-203ENST00000577716 CDK13Q14004 1512 aaKnown RBP13.6□□□□□ -0.23
RNF43-203ENST00000577716 VGFO15240 615 aaPredicted RBP13.6□□□□□ -0.23
RNF43-203ENST00000577716 MAP3K1Q13233 1512 aa13.59□□□□□ -0.23
RNF43-203ENST00000577716 TRIM6-TRIM34B2RNG4 842 aa13.59□□□□□ -0.23
RNF43-203ENST00000577716 CHAF1AQ13111 956 aaPredicted RBP13.59□□□□□ -0.23
RNF43-203ENST00000577716 NFKBIBQ15653 356 aa13.59□□□□□ -0.23
RNF43-203ENST00000577716 IFT140Q96RY7 1462 aa13.59□□□□□ -0.23
RNF43-203ENST00000577716 DZIP1LQ8IYY4 767 aaKnown RBP13.59□□□□□ -0.23
RNF43-203ENST00000577716 DDX11L8A8MPP1 907 aa13.59□□□□□ -0.23
RNF43-203ENST00000577716 PANK1Q8TE04 598 aa13.59□□□□□ -0.23
RNF43-203ENST00000577716 EPRSP07814 1512 aaKnown RBP13.58□□□□□ -0.24
RNF43-203ENST00000577716 SNAPC4Q5SXM2 1469 aa13.58□□□□□ -0.24
RNF43-203ENST00000577716 RUNDC1Q96C34 613 aa13.58□□□□□ -0.24
RNF43-203ENST00000577716 DDX19BQ9UMR2 479 aa13.58□□□□□ -0.24
RNF43-203ENST00000577716 NOL8Q76FK4 1167 aaKnown RBP13.57□□□□□ -0.24
RNF43-203ENST00000577716 STAC3Q96MF2 364 aa13.57□□□□□ -0.24
RNF43-203ENST00000577716 URB2Q14146 1524 aaKnown RBP13.57□□□□□ -0.24
RNF43-203ENST00000577716 TROQ12816 1431 aaPredicted RBP13.57□□□□□ -0.24
RNF43-203ENST00000577716 KIAA1107Q9UPP5 1409 aa13.57□□□□□ -0.24
RNF43-203ENST00000577716 MINK1Q8N4C8 1332 aaPredicted RBP13.57□□□□□ -0.24
RNF43-203ENST00000577716 NUTM2FA1L443 756 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms