RNA–Protein interactions for RNA: ENST00000576616.5

SLC12A4-219, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-219ENST00000576616 MBD5Q9P267 1494 aa15.18■□□□□ 0.02
SLC12A4-219ENST00000576616 CDC42BPAQ5VT25 1732 aa15.18■□□□□ 0.02
SLC12A4-219ENST00000576616 SPATA31E1Q6ZUB1 1445 aa15.16■□□□□ 0.02
SLC12A4-219ENST00000576616 CHD1O14646 1710 aa15.16■□□□□ 0.02
SLC12A4-219ENST00000576616 B4GALNT3Q6L9W6 998 aa15.15■□□□□ 0.02
SLC12A4-219ENST00000576616 ADGBQ8N7X0 1667 aa15.15■□□□□ 0.02
SLC12A4-219ENST00000576616 SHANK2Q9UPX8 1470 aa15.15■□□□□ 0.02
SLC12A4-219ENST00000576616 ADCY10Q96PN6 1610 aa15.14■□□□□ 0.01
SLC12A4-219ENST00000576616 ZBED9Q6R2W3 1325 aa15.14■□□□□ 0.01
SLC12A4-219ENST00000576616 TMF1P82094 1093 aa15.12■□□□□ 0.01
SLC12A4-219ENST00000576616 SAMD9LQ8IVG5 1584 aa15.11■□□□□ 0.01
SLC12A4-219ENST00000576616 FAM135AQ9P2D6 1515 aa15.11■□□□□ 0.01
SLC12A4-219ENST00000576616 GGT6Q6P531 493 aa15.11■□□□□ 0.01
SLC12A4-219ENST00000576616 PANK3Q9H999 370 aa15.1■□□□□ 0.01
SLC12A4-219ENST00000576616 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.1■□□□□ 0.012e-8■■■□□ 16.4
SLC12A4-219ENST00000576616 ARID4BQ4LE39 1312 aaPredicted RBP15.1■□□□□ 0.01
SLC12A4-219ENST00000576616 TRAPPC8Q9Y2L5 1435 aa15.09■□□□□ 0.01
SLC12A4-219ENST00000576616 ABCC2Q92887 1545 aa15.09■□□□□ 0.01
SLC12A4-219ENST00000576616 PPP4R2Q9NY27 417 aa15.09■□□□□ 0.01
SLC12A4-219ENST00000576616 TTC37Q6PGP7 1564 aa15.09■□□□□ 0.01
SLC12A4-219ENST00000576616 RALBP1Q15311 655 aa15.08■□□□□ 0.01
SLC12A4-219ENST00000576616 PLCH2O75038 1416 aa15.08■□□□□ 0.01
SLC12A4-219ENST00000576616 RBM19Q9Y4C8 960 aaKnown RBP15.08■□□□□ 0
SLC12A4-219ENST00000576616 KANK1Q14678 1352 aa15.07■□□□□ 0
SLC12A4-219ENST00000576616 KTN1Q86UP2 1357 aaKnown RBP15.07■□□□□ 0
SLC12A4-219ENST00000576616 SCAPERQ9BY12 1400 aa15.07■□□□□ 0
SLC12A4-219ENST00000576616 PNISRQ8TF01 805 aaKnown RBP15.07■□□□□ 0
SLC12A4-219ENST00000576616 DHX29Q7Z478 1369 aaKnown RBP15.07■□□□□ 0
SLC12A4-219ENST00000576616 MYBBP1AQ9BQG0 1328 aaKnown RBP15.07■□□□□ 0
SLC12A4-219ENST00000576616 KNSTRNQ9Y448 316 aa15.06■□□□□ 0
SLC12A4-219ENST00000576616 RALGAPBQ86X10 1494 aa15.06■□□□□ 0
SLC12A4-219ENST00000576616 CROCC2H7BZ55 1655 aa15.06■□□□□ 0
SLC12A4-219ENST00000576616 CCDC136Q96JN2 1154 aa15.05■□□□□ -0
SLC12A4-219ENST00000576616 ARHGEF5Q12774 1597 aa15.05■□□□□ -0
SLC12A4-219ENST00000576616 CDC42BPBQ9Y5S2 1711 aa15.04■□□□□ -0
SLC12A4-219ENST00000576616 NLRP13Q86W25 1043 aa15.04■□□□□ -0
SLC12A4-219ENST00000576616 NUDCQ9Y266 331 aa15.04■□□□□ -0
SLC12A4-219ENST00000576616 UHRF1BP1Q6BDS2 1440 aa15.03■□□□□ -0
SLC12A4-219ENST00000576616 ARHGEF12Q9NZN5 1544 aa15.03■□□□□ -0
SLC12A4-219ENST00000576616 PREX2Q70Z35 1606 aa15.03■□□□□ -0
SLC12A4-219ENST00000576616 PRAG1Q86YV5 1406 aa15.02□□□□□ -0.01
SLC12A4-219ENST00000576616 NUTM2DQ5VT03 806 aaPredicted RBP15.01□□□□□ -0.01
SLC12A4-219ENST00000576616 FAM69CQ0P6D2 419 aa15□□□□□ -0.01
SLC12A4-219ENST00000576616 BCORL1Q5H9F3 1711 aa15□□□□□ -0.01
SLC12A4-219ENST00000576616 WDR43Q15061 677 aaKnown RBP eCLIP14.99□□□□□ -0.01
SLC12A4-219ENST00000576616 CFAP70Q5T0N1 1121 aa14.99□□□□□ -0.01
SLC12A4-219ENST00000576616 PLA2R1Q13018 1463 aa14.99□□□□□ -0.01
SLC12A4-219ENST00000576616 DISP3Q9P2K9 1392 aa14.99□□□□□ -0.01
SLC12A4-219ENST00000576616 DUOX2Q9NRD8 1548 aa14.98□□□□□ -0.01
SLC12A4-219ENST00000576616 FANCAO15360 1455 aa14.98□□□□□ -0.01
SLC12A4-219ENST00000576616 A2MP01023 1474 aa14.98□□□□□ -0.01
SLC12A4-219ENST00000576616 CDCA8Q53HL2 280 aa14.98□□□□□ -0.01
SLC12A4-219ENST00000576616 KDM5CP41229 1560 aa14.97□□□□□ -0.01
SLC12A4-219ENST00000576616 TESK2Q96S53 571 aa14.97□□□□□ -0.01
SLC12A4-219ENST00000576616 MYO5CQ9NQX4 1742 aa14.96□□□□□ -0.01
SLC12A4-219ENST00000576616 MLECQ14165 292 aa14.96□□□□□ -0.01
SLC12A4-219ENST00000576616 BRD4O60885 1362 aaPredicted RBP14.95□□□□□ -0.02
SLC12A4-219ENST00000576616 ERBINQ96RT1 1412 aa14.95□□□□□ -0.02
SLC12A4-219ENST00000576616 TNNT2P45379 298 aaPredicted RBP14.95□□□□□ -0.02
SLC12A4-219ENST00000576616 WASHC2CQ9Y4E1 1318 aa14.95□□□□□ -0.02
SLC12A4-219ENST00000576616 ADGRL1O94910 1474 aa14.95□□□□□ -0.02
SLC12A4-219ENST00000576616 KDM5DQ9BY66 1539 aa14.95□□□□□ -0.02
SLC12A4-219ENST00000576616 ERICH6BQ5W0A0 696 aa14.95□□□□□ -0.02
SLC12A4-219ENST00000576616 RAPGEF3O95398 923 aa14.94□□□□□ -0.02
SLC12A4-219ENST00000576616 TRAK1Q9UPV9 953 aa14.94□□□□□ -0.02
SLC12A4-219ENST00000576616 CDCA7LQ96GN5 454 aa14.94□□□□□ -0.02
SLC12A4-219ENST00000576616 ANO8Q9HCE9 1232 aaPredicted RBP14.94□□□□□ -0.02
SLC12A4-219ENST00000576616 ZCCHC11Q5TAX3 1644 aaKnown RBP14.94□□□□□ -0.02
SLC12A4-219ENST00000576616 SAFB2Q14151 953 aaKnown RBP eCLIP14.93□□□□□ -0.02
SLC12A4-219ENST00000576616 WDR7Q9Y4E6 1490 aa14.93□□□□□ -0.02
SLC12A4-219ENST00000576616 ASXL2Q76L83 1435 aa14.93□□□□□ -0.02
SLC12A4-219ENST00000576616 PER1O15534 1290 aaPredicted RBP14.92□□□□□ -0.02
SLC12A4-219ENST00000576616 RCAN3Q9UKA8 241 aa14.92□□□□□ -0.02
SLC12A4-219ENST00000576616 SHROOM2Q13796 1616 aa14.91□□□□□ -0.02
SLC12A4-219ENST00000576616 TMEM132EQ6IEE7 984 aa14.9□□□□□ -0.02
SLC12A4-219ENST00000576616 ADGRF5Q8IZF2 1346 aa14.9□□□□□ -0.02
SLC12A4-219ENST00000576616 ADAMTS8Q9UP79 889 aa14.89□□□□□ -0.03
SLC12A4-219ENST00000576616 PLIN1O60240 522 aa14.89□□□□□ -0.03
SLC12A4-219ENST00000576616 CCDC146Q8IYE0 955 aa14.89□□□□□ -0.03
SLC12A4-219ENST00000576616 SMG6Q86US8 1419 aaKnown RBP14.89□□□□□ -0.03
SLC12A4-219ENST00000576616 ESF1Q9H501 851 aaKnown RBP14.88□□□□□ -0.03
SLC12A4-219ENST00000576616 UHRF1BP1LA0JNW5 1464 aa14.88□□□□□ -0.03
SLC12A4-219ENST00000576616 STAG3Q9UJ98 1225 aa14.87□□□□□ -0.03
SLC12A4-219ENST00000576616 ABCC1P33527 1531 aa14.87□□□□□ -0.03
SLC12A4-219ENST00000576616 STK26Q9P289 416 aa14.87□□□□□ -0.03
SLC12A4-219ENST00000576616 EXOC6Q8TAG9 804 aa14.86□□□□□ -0.03
SLC12A4-219ENST00000576616 EIF3AQ14152 1382 aaKnown RBP14.86□□□□□ -0.03
SLC12A4-219ENST00000576616 CD109Q6YHK3 1445 aa14.86□□□□□ -0.03
SLC12A4-219ENST00000576616 NEUROD2Q15784 382 aa14.86□□□□□ -0.03
SLC12A4-219ENST00000576616 PPP2R1AP30153 589 aa14.85□□□□□ -0.03
SLC12A4-219ENST00000576616 CLASP1Q7Z460 1538 aa14.85□□□□□ -0.03
SLC12A4-219ENST00000576616 MAST1Q9Y2H9 1570 aa14.85□□□□□ -0.03
SLC12A4-219ENST00000576616 GPRASP1Q5JY77 1395 aa14.85□□□□□ -0.03
SLC12A4-219ENST00000576616 RTEL1-TNFRSF6BF6WH68 1400 aa14.84□□□□□ -0.03
SLC12A4-219ENST00000576616 RRP1P56182 461 aaKnown RBP14.84□□□□□ -0.03
SLC12A4-219ENST00000576616 PARD3Q8TEW0 1356 aa14.84□□□□□ -0.03
SLC12A4-219ENST00000576616 STAC3Q96MF2 364 aa14.83□□□□□ -0.03
SLC12A4-219ENST00000576616 NPM2Q86SE8 214 aaKnown RBP14.83□□□□□ -0.04
SLC12A4-219ENST00000576616 UNC13BO14795 1591 aa14.82□□□□□ -0.04
SLC12A4-219ENST00000576616 PLXNC1O60486 1568 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms