RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 CLIP1P30622 1438 aa16.23■□□□□ 0.19
HCFC1R1-206ENST00000574151 A2MP01023 1474 aa16.22■□□□□ 0.19
HCFC1R1-206ENST00000574151 FAM135BQ49AJ0 1406 aa16.21■□□□□ 0.19
HCFC1R1-206ENST00000574151 HNRNPMP52272 730 aaKnown RBP eCLIP16.21■□□□□ 0.19
HCFC1R1-206ENST00000574151 CDC42BPAQ5VT25 1732 aa16.2■□□□□ 0.18
HCFC1R1-206ENST00000574151 LRRIQ1Q96JM4 1722 aa16.2■□□□□ 0.18
HCFC1R1-206ENST00000574151 ROBO1Q9Y6N7 1651 aa16.2■□□□□ 0.18
HCFC1R1-206ENST00000574151 PLXNC1O60486 1568 aa16.19■□□□□ 0.18
HCFC1R1-206ENST00000574151 UGGT1Q9NYU2 1555 aa16.19■□□□□ 0.18
HCFC1R1-206ENST00000574151 ATP7AQ04656 1500 aa16.19■□□□□ 0.18
HCFC1R1-206ENST00000574151 CHIC1Q5VXU3 224 aa16.18■□□□□ 0.18
HCFC1R1-206ENST00000574151 FAM135AQ9P2D6 1515 aa16.18■□□□□ 0.18
HCFC1R1-206ENST00000574151 SYCP2Q9BX26 1530 aa16.16■□□□□ 0.18
HCFC1R1-206ENST00000574151 PHLPP1O60346 1717 aa16.15■□□□□ 0.18
HCFC1R1-206ENST00000574151 ZC3H13Q5T200 1668 aaKnown RBP16.14■□□□□ 0.18
HCFC1R1-206ENST00000574151 MEX3CQ5U5Q3 659 aaKnown RBP16.14■□□□□ 0.17
HCFC1R1-206ENST00000574151 ZNF772Q68DY9 489 aaPredicted RBP16.14■□□□□ 0.17
HCFC1R1-206ENST00000574151 RXRBP28702 533 aa16.13■□□□□ 0.17
HCFC1R1-206ENST00000574151 ADGBQ8N7X0 1667 aa16.12■□□□□ 0.17
HCFC1R1-206ENST00000574151 CFAP65Q6ZU64 1925 aaKnown RBP16.12■□□□□ 0.17
HCFC1R1-206ENST00000574151 INO80Q9ULG1 1556 aaPredicted RBP16.12■□□□□ 0.17
HCFC1R1-206ENST00000574151 MIA2Q96PC5 1412 aa16.11■□□□□ 0.17
HCFC1R1-206ENST00000574151 PZPP20742 1482 aa16.1■□□□□ 0.17
HCFC1R1-206ENST00000574151 RBM33Q96EV2 1170 aaKnown RBP16.1■□□□□ 0.17
HCFC1R1-206ENST00000574151 JCADQ9P266 1359 aa16.1■□□□□ 0.17
HCFC1R1-206ENST00000574151 FMN1Q68DA7 1419 aa16.1■□□□□ 0.17
HCFC1R1-206ENST00000574151 NLRP1Q9C000 1473 aa16.1■□□□□ 0.17
HCFC1R1-206ENST00000574151 WASHC2CQ9Y4E1 1318 aa16.07■□□□□ 0.16
HCFC1R1-206ENST00000574151 LRP6O75581 1613 aa16.07■□□□□ 0.16
HCFC1R1-206ENST00000574151 KIF3BO15066 747 aa16.06■□□□□ 0.16
HCFC1R1-206ENST00000574151 ZRANB1Q9UGI0 708 aa16.06■□□□□ 0.16
HCFC1R1-206ENST00000574151 TMEM94Q12767 1356 aa16.05■□□□□ 0.16
HCFC1R1-206ENST00000574151 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
HCFC1R1-206ENST00000574151 SETBP1Q9Y6X0 1596 aa16.04■□□□□ 0.16
HCFC1R1-206ENST00000574151 NUTM2BA6NNL0 878 aaPredicted RBP16.03■□□□□ 0.16
HCFC1R1-206ENST00000574151 NUTM2EB1AL46 878 aaPredicted RBP16.03■□□□□ 0.16
HCFC1R1-206ENST00000574151 NUTM2DQ5VT03 806 aaPredicted RBP16.03■□□□□ 0.16
HCFC1R1-206ENST00000574151 NUTM2AQ8IVF1 878 aaPredicted RBP16.03■□□□□ 0.16
HCFC1R1-206ENST00000574151 KDM5DQ9BY66 1539 aa16.03■□□□□ 0.16
HCFC1R1-206ENST00000574151 LTKP29376 864 aa16.02■□□□□ 0.16
HCFC1R1-206ENST00000574151 TXNDC2Q86VQ3 553 aa16.01■□□□□ 0.15
HCFC1R1-206ENST00000574151 PROSER2Q86WR7 435 aaPredicted RBP16.01■□□□□ 0.15
HCFC1R1-206ENST00000574151 CDK12Q9NYV4 1490 aaPredicted RBP16■□□□□ 0.15
HCFC1R1-206ENST00000574151 SPATA31A6Q5VVP1 1343 aa15.99■□□□□ 0.15
HCFC1R1-206ENST00000574151 SCAF11Q99590 1463 aaKnown RBP15.99■□□□□ 0.15
HCFC1R1-206ENST00000574151 COL16A1Q07092 1604 aaPredicted RBP15.99■□□□□ 0.15
HCFC1R1-206ENST00000574151 SLAIN2Q9P270 581 aa15.99■□□□□ 0.15
HCFC1R1-206ENST00000574151 UBR1Q8IWV7 1749 aa15.99■□□□□ 0.15
HCFC1R1-206ENST00000574151 DHX29Q7Z478 1369 aaKnown RBP15.99■□□□□ 0.15
HCFC1R1-206ENST00000574151 GPATCH8Q9UKJ3 1502 aaKnown RBP15.99■□□□□ 0.15
HCFC1R1-206ENST00000574151 CFDP1Q9UEE9 299 aaPredicted RBP15.98■□□□□ 0.15
HCFC1R1-206ENST00000574151 LRRC9Q6ZRR7 1453 aa15.97■□□□□ 0.15
HCFC1R1-206ENST00000574151 ARHGAP35Q9NRY4 1499 aa15.97■□□□□ 0.15
HCFC1R1-206ENST00000574151 KIAA1107Q9UPP5 1409 aa15.97■□□□□ 0.15
HCFC1R1-206ENST00000574151 MAP3K1Q13233 1512 aa15.96■□□□□ 0.15
HCFC1R1-206ENST00000574151 FOXD1Q16676 465 aa15.96■□□□□ 0.15
HCFC1R1-206ENST00000574151 PLEKHH2Q8IVE3 1493 aa15.95■□□□□ 0.14
HCFC1R1-206ENST00000574151 AFF2P51816 1311 aa15.94■□□□□ 0.14
HCFC1R1-206ENST00000574151 RGS12O14924 1447 aa15.94■□□□□ 0.14
HCFC1R1-206ENST00000574151 UBTFP17480 764 aaKnown RBP15.93■□□□□ 0.14
HCFC1R1-206ENST00000574151 KCNA6P17658 529 aa15.93■□□□□ 0.14
HCFC1R1-206ENST00000574151 ZNF644Q9H582 1327 aaPredicted RBP15.93■□□□□ 0.14
HCFC1R1-206ENST00000574151 MSH6P52701 1360 aa15.92■□□□□ 0.14
HCFC1R1-206ENST00000574151 EID1Q9Y6B2 187 aa15.92■□□□□ 0.14
HCFC1R1-206ENST00000574151 SHPRHQ149N8 1683 aa15.92■□□□□ 0.14
HCFC1R1-206ENST00000574151 QTRT2Q9H974 415 aaKnown RBP15.91■□□□□ 0.14
HCFC1R1-206ENST00000574151 EEA1Q15075 1411 aa15.91■□□□□ 0.14
HCFC1R1-206ENST00000574151 RBM6P78332 1123 aaKnown RBP15.9■□□□□ 0.14
HCFC1R1-206ENST00000574151 SLC26A8Q96RN1 970 aa15.9■□□□□ 0.14
HCFC1R1-206ENST00000574151 FGD6Q6ZV73 1430 aa15.9■□□□□ 0.14
HCFC1R1-206ENST00000574151 NCOA2Q15596 1464 aa15.9■□□□□ 0.14
HCFC1R1-206ENST00000574151 CCDC18Q5T9S5 1454 aa15.9■□□□□ 0.14
HCFC1R1-206ENST00000574151 ARHGAP23Q9P227 1491 aa15.88■□□□□ 0.13
HCFC1R1-206ENST00000574151 TIAM1Q13009 1591 aa15.87■□□□□ 0.13
HCFC1R1-206ENST00000574151 ERVK-7P63135 1459 aa15.87■□□□□ 0.13
HCFC1R1-206ENST00000574151 SLIT1O75093 1534 aa15.87■□□□□ 0.13
HCFC1R1-206ENST00000574151 PRDM15P57071 1507 aaPredicted RBP15.87■□□□□ 0.13
HCFC1R1-206ENST00000574151 ATAD2Q6PL18 1390 aa15.87■□□□□ 0.13
HCFC1R1-206ENST00000574151 CCNB3Q8WWL7 1395 aa15.87■□□□□ 0.13
HCFC1R1-206ENST00000574151 RTEL1-TNFRSF6BF6WH68 1400 aa15.86■□□□□ 0.13
HCFC1R1-206ENST00000574151 C8orf37Q96NL8 207 aa15.84■□□□□ 0.13
HCFC1R1-206ENST00000574151 MBD5Q9P267 1494 aa15.84■□□□□ 0.13
HCFC1R1-206ENST00000574151 CEP152O94986 1710 aa15.82■□□□□ 0.12
HCFC1R1-206ENST00000574151 CASKIN1Q8WXD9 1431 aa15.82■□□□□ 0.12
HCFC1R1-206ENST00000574151 KDM5AP29375 1690 aaKnown RBP15.82■□□□□ 0.12
HCFC1R1-206ENST00000574151 ABCC3O15438 1527 aa15.81■□□□□ 0.12
HCFC1R1-206ENST00000574151 BCANQ96GW7 911 aa15.81■□□□□ 0.12
HCFC1R1-206ENST00000574151 STAG3Q9UJ98 1225 aa15.81■□□□□ 0.12
HCFC1R1-206ENST00000574151 NGLY1Q96IV0 654 aa15.8■□□□□ 0.12
HCFC1R1-206ENST00000574151 AHDC1Q5TGY3 1603 aaPredicted RBP15.79■□□□□ 0.12
HCFC1R1-206ENST00000574151 C14orf37Q86TY3 774 aa15.79■□□□□ 0.12
HCFC1R1-206ENST00000574151 PIK3C2BO00750 1634 aa15.79■□□□□ 0.12
HCFC1R1-206ENST00000574151 NKTRP30414 1462 aaKnown RBP15.78■□□□□ 0.12
HCFC1R1-206ENST00000574151 TMEM2Q9UHN6 1383 aa15.78■□□□□ 0.12
HCFC1R1-206ENST00000574151 TET3O43151 1660 aa15.78■□□□□ 0.12
HCFC1R1-206ENST00000574151 EP400Q96L91 3159 aa15.77■□□□□ 0.12
HCFC1R1-206ENST00000574151 DIP2AQ14689 1571 aa15.77■□□□□ 0.11
HCFC1R1-206ENST00000574151 NWD1Q149M9 1564 aa15.77■□□□□ 0.11
HCFC1R1-206ENST00000574151 CHD2O14647 1828 aaKnown RBP15.76■□□□□ 0.11
HCFC1R1-206ENST00000574151 LRP5O75197 1615 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms