RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 FMN1Q68DA7 1419 aa11.68□□□□□ -0.54
CNOT1-218ENST00000569732 CEBPAP49715 358 aaPredicted RBP11.67□□□□□ -0.54
CNOT1-218ENST00000569732 ILDR2Q71H61 639 aa11.67□□□□□ -0.54
CNOT1-218ENST00000569732 CREBZFQ9NS37 354 aa11.67□□□□□ -0.54
CNOT1-218ENST00000569732 IQSEC2Q5JU85 1478 aa11.67□□□□□ -0.54
CNOT1-218ENST00000569732 SPATA31D1Q6ZQQ2 1576 aa11.67□□□□□ -0.54
CNOT1-218ENST00000569732 DIP2CQ9Y2E4 1556 aa11.67□□□□□ -0.54
CNOT1-218ENST00000569732 VSIG10Q8N0Z9 540 aa11.66□□□□□ -0.54
CNOT1-218ENST00000569732 CFAP44Q96MT7 982 aa11.66□□□□□ -0.54
CNOT1-218ENST00000569732 ARHGAP5Q13017 1502 aa11.65□□□□□ -0.54
CNOT1-218ENST00000569732 C3P01024 1663 aa11.65□□□□□ -0.54
CNOT1-218ENST00000569732 CHGAP10645 457 aaKnown RBP11.65□□□□□ -0.54
CNOT1-218ENST00000569732 DCAF8Q5TAQ9 597 aa11.65□□□□□ -0.54
CNOT1-218ENST00000569732 AGLP35573 1532 aa11.65□□□□□ -0.55
CNOT1-218ENST00000569732 MLH3Q9UHC1 1453 aa11.64□□□□□ -0.55
CNOT1-218ENST00000569732 CLIP1P30622 1438 aa11.64□□□□□ -0.55
CNOT1-218ENST00000569732 SETD1BQ9UPS6 1966 aaKnown RBP11.64□□□□□ -0.55
CNOT1-218ENST00000569732 TROQ12816 1431 aaPredicted RBP11.63□□□□□ -0.55
CNOT1-218ENST00000569732 ABCA6Q8N139 1617 aa11.63□□□□□ -0.55
CNOT1-218ENST00000569732 TRAPPC8Q9Y2L5 1435 aa11.62□□□□□ -0.55
CNOT1-218ENST00000569732 LTBP4Q8N2S1 1624 aa11.62□□□□□ -0.55
CNOT1-218ENST00000569732 AFAP1Q8N556 730 aa11.62□□□□□ -0.55
CNOT1-218ENST00000569732 SPRYD3Q8NCJ5 442 aa11.62□□□□□ -0.55
CNOT1-218ENST00000569732 CNTLNQ9NXG0 1405 aa11.61□□□□□ -0.55
CNOT1-218ENST00000569732 MNX1P50219 401 aaPredicted RBP11.61□□□□□ -0.55
CNOT1-218ENST00000569732 ESF1Q9H501 851 aaKnown RBP11.61□□□□□ -0.55
CNOT1-218ENST00000569732 MYT1LQ9UL68 1186 aa11.61□□□□□ -0.55
CNOT1-218ENST00000569732 CDC42BPBQ9Y5S2 1711 aa11.6□□□□□ -0.55
CNOT1-218ENST00000569732 ATP1B4Q9UN42 357 aaPredicted RBP11.6□□□□□ -0.55
CNOT1-218ENST00000569732 PREX2Q70Z35 1606 aa11.6□□□□□ -0.55
CNOT1-218ENST00000569732 ABCC1P33527 1531 aa11.6□□□□□ -0.55
CNOT1-218ENST00000569732 NCOA1Q15788 1441 aa11.6□□□□□ -0.55
CNOT1-218ENST00000569732 ARHGAP35Q9NRY4 1499 aa11.59□□□□□ -0.55
CNOT1-218ENST00000569732 MROH2AA6NES4 1674 aa11.59□□□□□ -0.55
CNOT1-218ENST00000569732 ITSN2Q9NZM3 1697 aa11.59□□□□□ -0.55
CNOT1-218ENST00000569732 FAM212AQ96EL1 285 aa11.58□□□□□ -0.56
CNOT1-218ENST00000569732 NPATQ14207 1427 aa11.57□□□□□ -0.56
CNOT1-218ENST00000569732 LRRIQ1Q96JM4 1722 aa11.57□□□□□ -0.56
CNOT1-218ENST00000569732 PITPNM1O00562 1244 aa11.56□□□□□ -0.56
CNOT1-218ENST00000569732 KIDINS220Q9ULH0 1771 aa11.56□□□□□ -0.56
CNOT1-218ENST00000569732 CAMSAP1Q5T5Y3 1602 aa11.56□□□□□ -0.56
CNOT1-218ENST00000569732 HS6ST3Q8IZP7 471 aa11.55□□□□□ -0.56
CNOT1-218ENST00000569732 RNF25Q96BH1 459 aaPredicted RBP11.55□□□□□ -0.56
CNOT1-218ENST00000569732 CCDC18Q5T9S5 1454 aa11.55□□□□□ -0.56
CNOT1-218ENST00000569732 UBTFP17480 764 aaKnown RBP11.54□□□□□ -0.56
CNOT1-218ENST00000569732 TAOK2Q9UL54 1235 aa11.54□□□□□ -0.56
CNOT1-218ENST00000569732 PLA2R1Q13018 1463 aa11.53□□□□□ -0.56
CNOT1-218ENST00000569732 ZNF142P52746 1687 aaPredicted RBP11.52□□□□□ -0.56
CNOT1-218ENST00000569732 RIOK3O14730 519 aaKnown RBP11.52□□□□□ -0.57
CNOT1-218ENST00000569732 ZMYM3Q14202 1370 aa11.52□□□□□ -0.57
CNOT1-218ENST00000569732 CDC42BPAQ5VT25 1732 aa11.52□□□□□ -0.57
CNOT1-218ENST00000569732 SAMD9LQ8IVG5 1584 aa11.51□□□□□ -0.57
CNOT1-218ENST00000569732 MYO3AQ8NEV4 1616 aa11.51□□□□□ -0.57
CNOT1-218ENST00000569732 RASEFQ8IZ41 740 aa11.51□□□□□ -0.57
CNOT1-218ENST00000569732 KDM2AQ9Y2K7 1162 aa11.51□□□□□ -0.57
CNOT1-218ENST00000569732 BCANQ96GW7 911 aa11.5□□□□□ -0.57
CNOT1-218ENST00000569732 CASKIN1Q8WXD9 1431 aa11.5□□□□□ -0.57
CNOT1-218ENST00000569732 CHRM1P11229 460 aaPredicted RBP11.49□□□□□ -0.57
CNOT1-218ENST00000569732 TCOF1Q13428 1488 aaKnown RBP11.49□□□□□ -0.57
CNOT1-218ENST00000569732 PLXNC1O60486 1568 aa11.49□□□□□ -0.57
CNOT1-218ENST00000569732 CEP170BQ9Y4F5 1589 aaPredicted RBP11.49□□□□□ -0.57
CNOT1-218ENST00000569732 CLTCQ00610 1675 aaKnown RBP11.49□□□□□ -0.57
CNOT1-218ENST00000569732 SUPT6HQ7KZ85 1726 aaKnown RBP11.49□□□□□ -0.57
CNOT1-218ENST00000569732 UBAP1LF5GYI3 381 aa11.48□□□□□ -0.57
CNOT1-218ENST00000569732 ATP7AQ04656 1500 aa11.47□□□□□ -0.57
CNOT1-218ENST00000569732 SYCP2Q9BX26 1530 aa11.47□□□□□ -0.57
CNOT1-218ENST00000569732 ZNF335Q9H4Z2 1342 aaPredicted RBP11.47□□□□□ -0.57
CNOT1-218ENST00000569732 NCKAP5LQ9HCH0 1330 aa11.47□□□□□ -0.57
CNOT1-218ENST00000569732 TSHZ2Q9NRE2 1034 aa11.47□□□□□ -0.57
CNOT1-218ENST00000569732 INO80Q9ULG1 1556 aaPredicted RBP11.46□□□□□ -0.57
CNOT1-218ENST00000569732 PLEKHH2Q8IVE3 1493 aa11.46□□□□□ -0.57
CNOT1-218ENST00000569732 PTPRKQ15262 1439 aa11.46□□□□□ -0.57
CNOT1-218ENST00000569732 SPAG9O60271 1321 aaKnown RBP11.46□□□□□ -0.57
CNOT1-218ENST00000569732 A2MP01023 1474 aa11.45□□□□□ -0.58
CNOT1-218ENST00000569732 FYCO1Q9BQS8 1478 aa11.45□□□□□ -0.58
CNOT1-218ENST00000569732 KIAA1107Q9UPP5 1409 aa11.45□□□□□ -0.58
CNOT1-218ENST00000569732 GPATCH8Q9UKJ3 1502 aaKnown RBP11.45□□□□□ -0.58
CNOT1-218ENST00000569732 VGFO15240 615 aaPredicted RBP11.44□□□□□ -0.58
CNOT1-218ENST00000569732 ADGBQ8N7X0 1667 aa11.43□□□□□ -0.58
CNOT1-218ENST00000569732 LOC105371045A0A1W2PR82 267 aa11.43□□□□□ -0.58
CNOT1-218ENST00000569732 ZNF777Q9ULD5 760 aaPredicted RBP11.43□□□□□ -0.58
CNOT1-218ENST00000569732 CPS1P31327 1500 aa11.42□□□□□ -0.58
CNOT1-218ENST00000569732 A2ML1A8K2U0 1454 aa11.42□□□□□ -0.58
CNOT1-218ENST00000569732 DNMT1P26358 1616 aaKnown RBP11.42□□□□□ -0.58
CNOT1-218ENST00000569732 STK25O00506 426 aa11.41□□□□□ -0.58
CNOT1-218ENST00000569732 PYGBP11216 843 aa11.41□□□□□ -0.58
CNOT1-218ENST00000569732 HNRNPMP52272 730 aaKnown RBP eCLIP11.41□□□□□ -0.58
CNOT1-218ENST00000569732 MED1Q15648 1581 aaPredicted RBP11.41□□□□□ -0.58
CNOT1-218ENST00000569732 POLR1AO95602 1720 aaPredicted RBP11.4□□□□□ -0.58
CNOT1-218ENST00000569732 CHADLQ6NUI6 762 aa11.4□□□□□ -0.58
CNOT1-218ENST00000569732 GGT6Q6P531 493 aa11.4□□□□□ -0.58
CNOT1-218ENST00000569732 FAM135AQ9P2D6 1515 aa11.4□□□□□ -0.59
CNOT1-218ENST00000569732 TOM1O60784 492 aa11.39□□□□□ -0.59
CNOT1-218ENST00000569732 CFDP1Q9UEE9 299 aaPredicted RBP11.39□□□□□ -0.59
CNOT1-218ENST00000569732 CCNB3Q8WWL7 1395 aa11.38□□□□□ -0.59
CNOT1-218ENST00000569732 NEURL4Q96JN8 1562 aa11.37□□□□□ -0.59
CNOT1-218ENST00000569732 RTEL1-TNFRSF6BF6WH68 1400 aa11.37□□□□□ -0.59
CNOT1-218ENST00000569732 NKX1-1Q15270 411 aaPredicted RBP11.37□□□□□ -0.59
CNOT1-218ENST00000569732 SGIP1Q9BQI5 828 aa11.37□□□□□ -0.59
CNOT1-218ENST00000569732 SHANK2Q9UPX8 1470 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms