RNA–Protein interactions for RNA: ENST00000568346.1

KLHDC4-221, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 343 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-221ENST00000568346 SLC4A1APQ9BWU0 796 aaKnown RBP12.09□□□□□ -0.47
KLHDC4-221ENST00000568346 SPATA31E1Q6ZUB1 1445 aa12.09□□□□□ -0.47
KLHDC4-221ENST00000568346 CNTLNQ9NXG0 1405 aa12.09□□□□□ -0.47
KLHDC4-221ENST00000568346 RALGAPBQ86X10 1494 aa12.08□□□□□ -0.47
KLHDC4-221ENST00000568346 LAMC1P11047 1609 aa12.08□□□□□ -0.48
KLHDC4-221ENST00000568346 FAM135AQ9P2D6 1515 aa12.08□□□□□ -0.48
KLHDC4-221ENST00000568346 RIMS1Q86UR5 1692 aaKnown RBP12.08□□□□□ -0.48
KLHDC4-221ENST00000568346 L3MBTL2Q969R5 705 aa12.08□□□□□ -0.48
KLHDC4-221ENST00000568346 ABCA9Q8IUA7 1624 aa12.08□□□□□ -0.48
KLHDC4-221ENST00000568346 DUOX2Q9NRD8 1548 aa12.07□□□□□ -0.48
KLHDC4-221ENST00000568346 STRCQ7RTU9 1775 aa12.06□□□□□ -0.48
KLHDC4-221ENST00000568346 EIF4G2P78344 907 aaKnown RBP eCLIP12.06□□□□□ -0.48
KLHDC4-221ENST00000568346 ZNF777Q9ULD5 760 aaPredicted RBP12.06□□□□□ -0.48
KLHDC4-221ENST00000568346 BCORL1Q5H9F3 1711 aa12.06□□□□□ -0.48
KLHDC4-221ENST00000568346 DEPDC5O75140 1603 aa12.05□□□□□ -0.48
KLHDC4-221ENST00000568346 TRPM1Q7Z4N2 1603 aa12.05□□□□□ -0.48
KLHDC4-221ENST00000568346 ANP32CO43423 234 aa12.05□□□□□ -0.48
KLHDC4-221ENST00000568346 HSPA5P11021 654 aaKnown RBP12.05□□□□□ -0.48
KLHDC4-221ENST00000568346 E9PCH4 1651 aa12.05□□□□□ -0.48
KLHDC4-221ENST00000568346 LTBP4Q8N2S1 1624 aa12.04□□□□□ -0.48
KLHDC4-221ENST00000568346 PLCH2O75038 1416 aa12.04□□□□□ -0.48
KLHDC4-221ENST00000568346 ERBINQ96RT1 1412 aa12.04□□□□□ -0.48
KLHDC4-221ENST00000568346 TSPY4P0CV99 314 aa12.04□□□□□ -0.48
KLHDC4-221ENST00000568346 TSPY10P0CW01 314 aa12.04□□□□□ -0.48
KLHDC4-221ENST00000568346 CCDC7Q96M83 1385 aa12.04□□□□□ -0.48
KLHDC4-221ENST00000568346 UBAP1LF5GYI3 381 aa12.03□□□□□ -0.48
KLHDC4-221ENST00000568346 FOXD1Q16676 465 aa12.03□□□□□ -0.48
KLHDC4-221ENST00000568346 WASHC2AQ641Q2 1341 aa12.03□□□□□ -0.48
KLHDC4-221ENST00000568346 ATP10AO60312 1499 aa12.02□□□□□ -0.48
KLHDC4-221ENST00000568346 INO80Q9ULG1 1556 aaPredicted RBP12.02□□□□□ -0.49
KLHDC4-221ENST00000568346 EIF2AK4Q9P2K8 1649 aaKnown RBP12.02□□□□□ -0.49
KLHDC4-221ENST00000568346 HSPA1LP34931 641 aa12.02□□□□□ -0.49
KLHDC4-221ENST00000568346 NBPF8Q3BBV2 869 aa12.02□□□□□ -0.49
KLHDC4-221ENST00000568346 NUP155O75694 1391 aa12.02□□□□□ -0.49
KLHDC4-221ENST00000568346 CEP152O94986 1710 aa12.01□□□□□ -0.49
KLHDC4-221ENST00000568346 HIRIP3Q9BW71 556 aaPredicted RBP12.01□□□□□ -0.49
KLHDC4-221ENST00000568346 ZFYVE16Q7Z3T8 1539 aa12.01□□□□□ -0.49
KLHDC4-221ENST00000568346 RNF17Q9BXT8 1623 aaKnown RBP12□□□□□ -0.49
KLHDC4-221ENST00000568346 PKD2Q13563 968 aa12□□□□□ -0.49
KLHDC4-221ENST00000568346 SPHKAPQ2M3C7 1700 aa12□□□□□ -0.49
KLHDC4-221ENST00000568346 SRCAPQ6ZRS2 3230 aa11.99□□□□□ -0.49
KLHDC4-221ENST00000568346 RTEL1-TNFRSF6BF6WH68 1400 aa11.99□□□□□ -0.49
KLHDC4-221ENST00000568346 WDR7Q9Y4E6 1490 aa11.99□□□□□ -0.49
KLHDC4-221ENST00000568346 TET3O43151 1660 aa11.98□□□□□ -0.49
KLHDC4-221ENST00000568346 IQSEC2Q5JU85 1478 aa11.98□□□□□ -0.49
KLHDC4-221ENST00000568346 YEATS2Q9ULM3 1422 aa11.98□□□□□ -0.49
KLHDC4-221ENST00000568346 HNRNPMP52272 730 aaKnown RBP eCLIP11.98□□□□□ -0.49
KLHDC4-221ENST00000568346 KCNH8Q96L42 1107 aa11.98□□□□□ -0.49
KLHDC4-221ENST00000568346 CFAP74Q9C0B2 1584 aa11.97□□□□□ -0.49
KLHDC4-221ENST00000568346 ARID4BQ4LE39 1312 aaPredicted RBP11.97□□□□□ -0.49
KLHDC4-221ENST00000568346 NEURL4Q96JN8 1562 aa11.96□□□□□ -0.49
KLHDC4-221ENST00000568346 VWDEQ8N2E2 1590 aa11.96□□□□□ -0.5
KLHDC4-221ENST00000568346 USP47Q96K76 1375 aa11.95□□□□□ -0.5
KLHDC4-221ENST00000568346 RGS17Q9UGC6 210 aaPredicted RBP11.94□□□□□ -0.5
KLHDC4-221ENST00000568346 DMRT2Q9Y5R5 561 aa11.94□□□□□ -0.5
KLHDC4-221ENST00000568346 PRDM15P57071 1507 aaPredicted RBP11.94□□□□□ -0.5
KLHDC4-221ENST00000568346 ATP7AQ04656 1500 aa11.94□□□□□ -0.5
KLHDC4-221ENST00000568346 PLA2R1Q13018 1463 aa11.94□□□□□ -0.5
KLHDC4-221ENST00000568346 TRPM2O94759 1503 aa11.93□□□□□ -0.5
KLHDC4-221ENST00000568346 KIAA1210Q9ULL0 1709 aa11.93□□□□□ -0.5
KLHDC4-221ENST00000568346 CCDC144AA2RUR9 1427 aa11.93□□□□□ -0.5
KLHDC4-221ENST00000568346 PRAG1Q86YV5 1406 aa11.93□□□□□ -0.5
KLHDC4-221ENST00000568346 ROCK2O75116 1388 aaKnown RBP11.92□□□□□ -0.5
KLHDC4-221ENST00000568346 KIF7Q2M1P5 1343 aa11.92□□□□□ -0.5
KLHDC4-221ENST00000568346 SETD1AO15047 1707 aaKnown RBP11.92□□□□□ -0.5
KLHDC4-221ENST00000568346 IQGAP1P46940 1657 aa11.92□□□□□ -0.5
KLHDC4-221ENST00000568346 EFCAB2Q5VUJ9 269 aa11.92□□□□□ -0.5
KLHDC4-221ENST00000568346 TRAPPC8Q9Y2L5 1435 aa11.92□□□□□ -0.5
KLHDC4-221ENST00000568346 GPRASP1Q5JY77 1395 aa11.92□□□□□ -0.5
KLHDC4-221ENST00000568346 A2MP01023 1474 aa11.91□□□□□ -0.5
KLHDC4-221ENST00000568346 MROH1Q8NDA8 1641 aa11.91□□□□□ -0.5
KLHDC4-221ENST00000568346 SUPT16HQ9Y5B9 1047 aaKnown RBP11.91□□□□□ -0.5
KLHDC4-221ENST00000568346 KIDINS220Q9ULH0 1771 aa11.9□□□□□ -0.5
KLHDC4-221ENST00000568346 C11orf95C9JLR9 678 aaPredicted RBP11.9□□□□□ -0.5
KLHDC4-221ENST00000568346 PTPRTO14522 1441 aa11.9□□□□□ -0.5
KLHDC4-221ENST00000568346 IFT172Q9UG01 1749 aa11.9□□□□□ -0.5
KLHDC4-221ENST00000568346 DHX29Q7Z478 1369 aaKnown RBP11.89□□□□□ -0.51
KLHDC4-221ENST00000568346 FANCAO15360 1455 aa11.89□□□□□ -0.51
KLHDC4-221ENST00000568346 KIF1BO60333 1816 aa11.88□□□□□ -0.51
KLHDC4-221ENST00000568346 PRKRIP1Q9H875 184 aaPredicted RBP11.88□□□□□ -0.51
KLHDC4-221ENST00000568346 CLTCL1P53675 1640 aa11.88□□□□□ -0.51
KLHDC4-221ENST00000568346 IFFO2Q5TF58 517 aa11.87□□□□□ -0.51
KLHDC4-221ENST00000568346 PIP4K2BP78356 416 aa11.86□□□□□ -0.51
KLHDC4-221ENST00000568346 PREX1Q8TCU6 1659 aa11.85□□□□□ -0.51
KLHDC4-221ENST00000568346 LMTK2Q8IWU2 1503 aa11.85□□□□□ -0.51
KLHDC4-221ENST00000568346 EFCAB6Q5THR3 1501 aa11.84□□□□□ -0.51
KLHDC4-221ENST00000568346 KTN1Q86UP2 1357 aaKnown RBP11.83□□□□□ -0.52
KLHDC4-221ENST00000568346 POTEAQ6S8J7 498 aa11.82□□□□□ -0.52
KLHDC4-221ENST00000568346 CD109Q6YHK3 1445 aa11.82□□□□□ -0.52
KLHDC4-221ENST00000568346 SPAG9O60271 1321 aaKnown RBP11.82□□□□□ -0.52
KLHDC4-221ENST00000568346 CARD11Q9BXL7 1154 aa11.81□□□□□ -0.52
KLHDC4-221ENST00000568346 SENP3Q9H4L4 574 aaPredicted RBP11.81□□□□□ -0.52
KLHDC4-221ENST00000568346 ZNF518AQ6AHZ1 1483 aa11.81□□□□□ -0.52
KLHDC4-221ENST00000568346 MROH2AA6NES4 1674 aa11.8□□□□□ -0.52
KLHDC4-221ENST00000568346 MYO3AQ8NEV4 1616 aa11.79□□□□□ -0.52
KLHDC4-221ENST00000568346 RAPGEF3O95398 923 aa11.79□□□□□ -0.52
KLHDC4-221ENST00000568346 ZNF335Q9H4Z2 1342 aaPredicted RBP11.79□□□□□ -0.52
KLHDC4-221ENST00000568346 SCAPERQ9BY12 1400 aa11.78□□□□□ -0.52
KLHDC4-221ENST00000568346 ZC3H13Q5T200 1668 aaKnown RBP11.78□□□□□ -0.52
KLHDC4-221ENST00000568346 MYOM2P54296 1465 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms