RNA–Protein interactions for RNA: ENST00000565958.1

CCNDBP1-207, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-207ENST00000565958 RYDENQ9NUL5 291 aaKnown RBP10.78□□□□□ -0.68
CCNDBP1-207ENST00000565958 EVI5O60447 810 aa10.77□□□□□ -0.69
CCNDBP1-207ENST00000565958 ANKK1Q8NFD2 765 aa10.77□□□□□ -0.69
CCNDBP1-207ENST00000565958 PDE4AP27815 886 aa10.75□□□□□ -0.69
CCNDBP1-207ENST00000565958 NBR1Q14596 966 aa10.75□□□□□ -0.69
CCNDBP1-207ENST00000565958 RABGEF1Q9UJ41 708 aa10.75□□□□□ -0.69
CCNDBP1-207ENST00000565958 Q6ZNB5 142 aa10.74□□□□□ -0.69
CCNDBP1-207ENST00000565958 PPP1R3GB7ZBB8 358 aa10.72□□□□□ -0.69
CCNDBP1-207ENST00000565958 NYAP1Q6ZVC0 841 aa10.72□□□□□ -0.69
CCNDBP1-207ENST00000565958 LAPTM4BQ86VI4 370 aa10.7□□□□□ -0.7
CCNDBP1-207ENST00000565958 NCKAP5LQ9HCH0 1330 aa10.69□□□□□ -0.7
CCNDBP1-207ENST00000565958 MAP3K9P80192 1104 aa10.69□□□□□ -0.7
CCNDBP1-207ENST00000565958 SOWAHBA6NEL2 793 aa10.68□□□□□ -0.7
CCNDBP1-207ENST00000565958 BCAMP50895 628 aa10.68□□□□□ -0.7
CCNDBP1-207ENST00000565958 NKX1-1Q15270 411 aaPredicted RBP10.68□□□□□ -0.7
CCNDBP1-207ENST00000565958 PROX2Q3B8N5 592 aa10.67□□□□□ -0.7
CCNDBP1-207ENST00000565958 KCNC4Q03721 635 aa10.66□□□□□ -0.7
CCNDBP1-207ENST00000565958 LAPTM4AQ15012 233 aa10.66□□□□□ -0.7
CCNDBP1-207ENST00000565958 PCDHGA10Q9Y5H3 936 aa10.65□□□□□ -0.7
CCNDBP1-207ENST00000565958 COL9A1P20849 921 aa10.64□□□□□ -0.71
CCNDBP1-207ENST00000565958 FBXW7Q969H0 707 aa10.64□□□□□ -0.71
CCNDBP1-207ENST00000565958 DDX27Q96GQ7 796 aaKnown RBP10.63□□□□□ -0.71
CCNDBP1-207ENST00000565958 ZFRQ96KR1 1074 aaKnown RBP10.63□□□□□ -0.71
CCNDBP1-207ENST00000565958 LARP6Q9BRS8 491 aaKnown RBP10.63□□□□□ -0.71
CCNDBP1-207ENST00000565958 GTPBP6O43824 516 aaPredicted RBP10.62□□□□□ -0.71
CCNDBP1-207ENST00000565958 ONECUT3O60422 494 aaPredicted RBP10.62□□□□□ -0.71
CCNDBP1-207ENST00000565958 WBP1LQ9NX94 342 aa10.62□□□□□ -0.71
CCNDBP1-207ENST00000565958 TYW1BQ6NUM6 668 aa10.61□□□□□ -0.71
CCNDBP1-207ENST00000565958 KIAA1468Q9P260 1216 aa10.61□□□□□ -0.71
CCNDBP1-207ENST00000565958 PHF14O94880 888 aa10.59□□□□□ -0.71
CCNDBP1-207ENST00000565958 MFSD10Q14728 455 aa10.58□□□□□ -0.72
CCNDBP1-207ENST00000565958 TRAF7Q6Q0C0 670 aa10.56□□□□□ -0.72
CCNDBP1-207ENST00000565958 EMILIN3Q9NT22 766 aa10.56□□□□□ -0.72
CCNDBP1-207ENST00000565958 TSR3Q9UJK0 312 aaKnown RBP10.55□□□□□ -0.72
CCNDBP1-207ENST00000565958 GFRA3O60609 400 aa10.54□□□□□ -0.72
CCNDBP1-207ENST00000565958 FAM98CQ17RN3 349 aaKnown RBP10.54□□□□□ -0.72
CCNDBP1-207ENST00000565958 SEPT9Q9UHD8 586 aaPredicted RBP10.54□□□□□ -0.72
CCNDBP1-207ENST00000565958 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.53□□□□□ -0.72
CCNDBP1-207ENST00000565958 C6orf132Q5T0Z8 1188 aa10.52□□□□□ -0.73
CCNDBP1-207ENST00000565958 LRCH3Q96II8 777 aa10.52□□□□□ -0.73
CCNDBP1-207ENST00000565958 EPAS1Q99814 870 aa10.52□□□□□ -0.73
CCNDBP1-207ENST00000565958 TRIM6-TRIM34B2RNG4 842 aa10.51□□□□□ -0.73
CCNDBP1-207ENST00000565958 HPS5Q9UPZ3 1129 aa10.51□□□□□ -0.73
CCNDBP1-207ENST00000565958 LCE2BO14633 110 aa10.5□□□□□ -0.73
CCNDBP1-207ENST00000565958 NRG2O14511 850 aaPredicted RBP10.45□□□□□ -0.74
CCNDBP1-207ENST00000565958 PPP4CP60510 307 aa10.44□□□□□ -0.74
CCNDBP1-207ENST00000565958 PRKD2Q9BZL6 878 aa10.44□□□□□ -0.74
CCNDBP1-207ENST00000565958 P3H3Q8IVL6 736 aa10.43□□□□□ -0.74
CCNDBP1-207ENST00000565958 PACS2Q86VP3 889 aa10.42□□□□□ -0.74
CCNDBP1-207ENST00000565958 TJAP1Q5JTD0 557 aa10.41□□□□□ -0.74
CCNDBP1-207ENST00000565958 RBM33Q96EV2 1170 aaKnown RBP10.41□□□□□ -0.74
CCNDBP1-207ENST00000565958 V9GY48 417 aaPredicted RBP10.41□□□□□ -0.74
CCNDBP1-207ENST00000565958 CAMK2BQ13554 666 aa10.38□□□□□ -0.75
CCNDBP1-207ENST00000565958 IL21Q9HBE4 155 aa10.37□□□□□ -0.75
CCNDBP1-207ENST00000565958 DPYSL4O14531 572 aa10.36□□□□□ -0.75
CCNDBP1-207ENST00000565958 PPP1R18Q6NYC8 613 aa10.36□□□□□ -0.75
CCNDBP1-207ENST00000565958 TSKSQ9UJT2 592 aa10.36□□□□□ -0.75
CCNDBP1-207ENST00000565958 ZNF787Q6DD87 383 aa10.35□□□□□ -0.75
CCNDBP1-207ENST00000565958 DDX12PQ92771 950 aa10.35□□□□□ -0.75
CCNDBP1-207ENST00000565958 CADPS2Q86UW7 1296 aa10.34□□□□□ -0.75
CCNDBP1-207ENST00000565958 MTRQ99707 1265 aa10.34□□□□□ -0.75
CCNDBP1-207ENST00000565958 EN1Q05925 392 aaPredicted RBP10.33□□□□□ -0.76
CCNDBP1-207ENST00000565958 SAMD7Q7Z3H4 446 aa10.33□□□□□ -0.76
CCNDBP1-207ENST00000565958 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.33□□□□□ -0.76
CCNDBP1-207ENST00000565958 MAP3K7O43318 606 aa10.32□□□□□ -0.76
CCNDBP1-207ENST00000565958 WDR70Q9NW82 654 aa10.32□□□□□ -0.76
CCNDBP1-207ENST00000565958 KCNV2Q8TDN2 545 aa10.31□□□□□ -0.76
CCNDBP1-207ENST00000565958 PDZRN3Q9UPQ7 1066 aa10.31□□□□□ -0.76
CCNDBP1-207ENST00000565958 TSR1Q2NL82 804 aaKnown RBP10.29□□□□□ -0.76
CCNDBP1-207ENST00000565958 CDCA7LQ96GN5 454 aa10.29□□□□□ -0.76
CCNDBP1-207ENST00000565958 TIMELESSQ9UNS1 1208 aa10.29□□□□□ -0.76
CCNDBP1-207ENST00000565958 SMAPO00193 183 aa10.28□□□□□ -0.76
CCNDBP1-207ENST00000565958 TULP1O00294 542 aaPredicted RBP10.28□□□□□ -0.76
CCNDBP1-207ENST00000565958 ZNF516Q92618 1163 aa10.28□□□□□ -0.76
CCNDBP1-207ENST00000565958 GTF3C3Q9Y5Q9 886 aa10.28□□□□□ -0.76
CCNDBP1-207ENST00000565958 PRSS12P56730 875 aa10.27□□□□□ -0.77
CCNDBP1-207ENST00000565958 CERKQ8TCT0 537 aa10.27□□□□□ -0.77
CCNDBP1-207ENST00000565958 GGCXP38435 758 aa10.26□□□□□ -0.77
CCNDBP1-207ENST00000565958 HDGFP51858 240 aaKnown RBP10.26□□□□□ -0.77
CCNDBP1-207ENST00000565958 NBPF26B4DH59 902 aa10.25□□□□□ -0.77
CCNDBP1-207ENST00000565958 TMEM132AQ24JP5 1023 aa10.25□□□□□ -0.77
CCNDBP1-207ENST00000565958 LMOD2Q6P5Q4 547 aa10.25□□□□□ -0.77
CCNDBP1-207ENST00000565958 ZNF775Q96BV0 537 aaPredicted RBP10.25□□□□□ -0.77
CCNDBP1-207ENST00000565958 TATDN2Q93075 761 aa10.24□□□□□ -0.77
CCNDBP1-207ENST00000565958 FAM198AQ9UFP1 575 aa10.23□□□□□ -0.77
CCNDBP1-207ENST00000565958 PNMA3Q9UL41 463 aa10.23□□□□□ -0.77
CCNDBP1-207ENST00000565958 PDIA6Q15084 440 aa10.22□□□□□ -0.77
CCNDBP1-207ENST00000565958 ERICH6Q7L0X2 663 aa10.22□□□□□ -0.77
CCNDBP1-207ENST00000565958 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCNDBP1-207ENST00000565958 NECTIN2Q92692 538 aa10.22□□□□□ -0.77
CCNDBP1-207ENST00000565958 TMUB1Q9BVT8 246 aa10.22□□□□□ -0.77
CCNDBP1-207ENST00000565958 SPDYE16A6NNV3 312 aaPredicted RBP10.21□□□□□ -0.77
CCNDBP1-207ENST00000565958 APLP1P51693 650 aa10.21□□□□□ -0.77
CCNDBP1-207ENST00000565958 NKX2-3Q8TAU0 364 aa10.21□□□□□ -0.77
CCNDBP1-207ENST00000565958 RNF40O75150 1001 aa10.2□□□□□ -0.78
CCNDBP1-207ENST00000565958 C3orf80F5H4A9 247 aa10.19□□□□□ -0.78
CCNDBP1-207ENST00000565958 NUDT18Q6ZVK8 323 aa10.16□□□□□ -0.78
CCNDBP1-207ENST00000565958 COPS2P61201 443 aa10.15□□□□□ -0.78
CCNDBP1-207ENST00000565958 ARHGEF1Q92888 912 aaKnown RBP10.15□□□□□ -0.78
CCNDBP1-207ENST00000565958 RBM27Q9P2N5 1060 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms