RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 PLCH2O75038 1416 aa9.03□□□□□ -0.96
CHD9-217ENST00000565832 WDR7Q9Y4E6 1490 aa9.03□□□□□ -0.96
CHD9-217ENST00000565832 RBM42Q9BTD8 480 aaKnown RBP9.03□□□□□ -0.96
CHD9-217ENST00000565832 C9orf84Q5VXU9 1444 aa9.03□□□□□ -0.96
CHD9-217ENST00000565832 SYCP2Q9BX26 1530 aa9.02□□□□□ -0.97
CHD9-217ENST00000565832 GCC2Q8IWJ2 1684 aa9.02□□□□□ -0.97
CHD9-217ENST00000565832 ANKRD30AQ9BXX3 1397 aa9.02□□□□□ -0.97
CHD9-217ENST00000565832 MYO5CQ9NQX4 1742 aa9.02□□□□□ -0.97
CHD9-217ENST00000565832 ZNF316A6NFI3 1004 aaPredicted RBP9.02□□□□□ -0.97
CHD9-217ENST00000565832 AKT1S1Q96B36 256 aa9.02□□□□□ -0.97
CHD9-217ENST00000565832 SPDYE1Q8NFV5 336 aaPredicted RBP9.01□□□□□ -0.97
CHD9-217ENST00000565832 BBXQ8WY36 941 aaPredicted RBP9.01□□□□□ -0.97
CHD9-217ENST00000565832 ANKRD50Q9ULJ7 1429 aa9□□□□□ -0.97
CHD9-217ENST00000565832 CROCC2H7BZ55 1655 aa9□□□□□ -0.97
CHD9-217ENST00000565832 TRAPPC8Q9Y2L5 1435 aa9□□□□□ -0.97
CHD9-217ENST00000565832 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.99□□□□□ -0.97
CHD9-217ENST00000565832 CLEC11AQ9Y240 323 aa8.99□□□□□ -0.97
CHD9-217ENST00000565832 KIF15Q9NS87 1388 aa8.99□□□□□ -0.97
CHD9-217ENST00000565832 RSPH4AQ5TD94 716 aa8.99□□□□□ -0.97
CHD9-217ENST00000565832 ADGRL2O95490 1459 aa8.98□□□□□ -0.97
CHD9-217ENST00000565832 CCDC141Q6ZP82 1450 aa8.98□□□□□ -0.97
CHD9-217ENST00000565832 PPP1R15AO75807 674 aaPredicted RBP8.98□□□□□ -0.97
CHD9-217ENST00000565832 HIRIP3Q9BW71 556 aaPredicted RBP8.98□□□□□ -0.97
CHD9-217ENST00000565832 RIMBP3CA6NJZ7 1639 aa8.98□□□□□ -0.97
CHD9-217ENST00000565832 RIMBP3BA6NNM3 1639 aa8.98□□□□□ -0.97
CHD9-217ENST00000565832 RIMBP3Q9UFD9 1639 aa8.98□□□□□ -0.97
CHD9-217ENST00000565832 DIEXFQ68CQ4 756 aaKnown RBP8.97□□□□□ -0.97
CHD9-217ENST00000565832 NUP155O75694 1391 aa8.97□□□□□ -0.97
CHD9-217ENST00000565832 ADGBQ8N7X0 1667 aa8.97□□□□□ -0.97
CHD9-217ENST00000565832 ARHGEF5Q12774 1597 aa8.97□□□□□ -0.97
CHD9-217ENST00000565832 MYT1LQ9UL68 1186 aa8.97□□□□□ -0.97
CHD9-217ENST00000565832 KIAA1107Q9UPP5 1409 aa8.97□□□□□ -0.97
CHD9-217ENST00000565832 FANCAO15360 1455 aa8.96□□□□□ -0.97
CHD9-217ENST00000565832 PAXIP1Q6ZW49 1069 aaPredicted RBP8.96□□□□□ -0.97
CHD9-217ENST00000565832 REM2Q8IYK8 340 aaPredicted RBP8.96□□□□□ -0.97
CHD9-217ENST00000565832 PZPP20742 1482 aa8.96□□□□□ -0.98
CHD9-217ENST00000565832 SHANK2Q9UPX8 1470 aa8.96□□□□□ -0.98
CHD9-217ENST00000565832 TONSLQ96HA7 1378 aa8.95□□□□□ -0.98
CHD9-217ENST00000565832 ABCA9Q8IUA7 1624 aa8.95□□□□□ -0.98
CHD9-217ENST00000565832 CD109Q6YHK3 1445 aa8.95□□□□□ -0.98
CHD9-217ENST00000565832 ANKRD30BQ9BXX2 1392 aa8.95□□□□□ -0.98
CHD9-217ENST00000565832 SPAG9O60271 1321 aaKnown RBP8.95□□□□□ -0.98
CHD9-217ENST00000565832 PRR29P0C7W0 189 aa8.95□□□□□ -0.98
CHD9-217ENST00000565832 NUBP1P53384 320 aa8.95□□□□□ -0.98
CHD9-217ENST00000565832 L3MBTL2Q969R5 705 aa8.95□□□□□ -0.98
CHD9-217ENST00000565832 SCAPERQ9BY12 1400 aa8.94□□□□□ -0.98
CHD9-217ENST00000565832 CHGAP10645 457 aaKnown RBP8.94□□□□□ -0.98
CHD9-217ENST00000565832 CFAP44Q96MT7 982 aa8.94□□□□□ -0.98
CHD9-217ENST00000565832 CREBZFQ9NS37 354 aa8.94□□□□□ -0.98
CHD9-217ENST00000565832 PLEKHH2Q8IVE3 1493 aa8.94□□□□□ -0.98
CHD9-217ENST00000565832 ABCC1P33527 1531 aa8.93□□□□□ -0.98
CHD9-217ENST00000565832 RAPGEF3O95398 923 aa8.93□□□□□ -0.98
CHD9-217ENST00000565832 ADGRL1O94910 1474 aa8.92□□□□□ -0.98
CHD9-217ENST00000565832 FAM69CQ0P6D2 419 aa8.92□□□□□ -0.98
CHD9-217ENST00000565832 TIMELESSQ9UNS1 1208 aa8.92□□□□□ -0.98
CHD9-217ENST00000565832 GSE1Q14687 1217 aa8.92□□□□□ -0.98
CHD9-217ENST00000565832 VSIG10Q8N0Z9 540 aa8.91□□□□□ -0.98
CHD9-217ENST00000565832 RNF25Q96BH1 459 aaPredicted RBP8.91□□□□□ -0.98
CHD9-217ENST00000565832 MNX1P50219 401 aaPredicted RBP8.9□□□□□ -0.98
CHD9-217ENST00000565832 ARAP3Q8WWN8 1544 aa8.9□□□□□ -0.99
CHD9-217ENST00000565832 DCAF8Q5TAQ9 597 aa8.89□□□□□ -0.99
CHD9-217ENST00000565832 MAST1Q9Y2H9 1570 aa8.89□□□□□ -0.99
CHD9-217ENST00000565832 KIF3BO15066 747 aa8.89□□□□□ -0.99
CHD9-217ENST00000565832 NBPF8Q3BBV2 869 aa8.89□□□□□ -0.99
CHD9-217ENST00000565832 SPRYD3Q8NCJ5 442 aa8.88□□□□□ -0.99
CHD9-217ENST00000565832 ACIN1Q9UKV3 1341 aaKnown RBP8.87□□□□□ -0.99
CHD9-217ENST00000565832 RPRD2Q5VT52 1461 aaKnown RBP8.87□□□□□ -0.99
CHD9-217ENST00000565832 FAM135AQ9P2D6 1515 aa8.87□□□□□ -0.99
CHD9-217ENST00000565832 ZNF326Q5BKZ1 582 aaKnown RBP8.87□□□□□ -0.99
CHD9-217ENST00000565832 KDM2AQ9Y2K7 1162 aa8.87□□□□□ -0.99
CHD9-217ENST00000565832 ZFYVE16Q7Z3T8 1539 aa8.87□□□□□ -0.99
CHD9-217ENST00000565832 DUOX2Q9NRD8 1548 aa8.87□□□□□ -0.99
CHD9-217ENST00000565832 PLXNC1O60486 1568 aa8.86□□□□□ -0.99
CHD9-217ENST00000565832 PITPNM1O00562 1244 aa8.86□□□□□ -0.99
CHD9-217ENST00000565832 TSPOAP1O95153 1857 aa8.86□□□□□ -0.99
CHD9-217ENST00000565832 RTEL1-TNFRSF6BF6WH68 1400 aa8.86□□□□□ -0.99
CHD9-217ENST00000565832 RGL3Q3MIN7 710 aa8.86□□□□□ -0.99
CHD9-217ENST00000565832 FAM212AQ96EL1 285 aa8.85□□□□□ -0.99
CHD9-217ENST00000565832 ATP7AQ04656 1500 aa8.85□□□□□ -0.99
CHD9-217ENST00000565832 HS6ST3Q8IZP7 471 aa8.85□□□□□ -0.99
CHD9-217ENST00000565832 KIDINS220Q9ULH0 1771 aa8.84□□□□□ -0.99
CHD9-217ENST00000565832 GGT6Q6P531 493 aa8.84□□□□□ -0.99
CHD9-217ENST00000565832 RASEFQ8IZ41 740 aa8.84□□□□□ -0.99
CHD9-217ENST00000565832 DHX29Q7Z478 1369 aaKnown RBP8.84□□□□□ -0.99
CHD9-217ENST00000565832 ERBINQ96RT1 1412 aa8.84□□□□□ -0.99
CHD9-217ENST00000565832 PLA2R1Q13018 1463 aa8.84□□□□□ -0.99
CHD9-217ENST00000565832 DDX10Q13206 875 aaKnown RBP8.83□□□□□ -1
CHD9-217ENST00000565832 DCAF11Q8TEB1 546 aa8.83□□□□□ -1
CHD9-217ENST00000565832 ZNF518AQ6AHZ1 1483 aa8.83□□□□□ -1
CHD9-217ENST00000565832 KDM5DQ9BY66 1539 aa8.83□□□□□ -1
CHD9-217ENST00000565832 INO80Q9ULG1 1556 aaPredicted RBP8.83□□□□□ -1
CHD9-217ENST00000565832 TSHZ2Q9NRE2 1034 aa8.83□□□□□ -1
CHD9-217ENST00000565832 POGZQ7Z3K3 1410 aa8.83□□□□□ -1
CHD9-217ENST00000565832 TEX14Q8IWB6 1497 aa8.83□□□□□ -1
CHD9-217ENST00000565832 MAP3K4Q9Y6R4 1608 aa8.82□□□□□ -1
CHD9-217ENST00000565832 UNC13BO14795 1591 aa8.82□□□□□ -1
CHD9-217ENST00000565832 RIOK3O14730 519 aaKnown RBP8.82□□□□□ -1
CHD9-217ENST00000565832 HSPA5P11021 654 aaKnown RBP8.82□□□□□ -1
CHD9-217ENST00000565832 CFAP65Q6ZU64 1925 aaKnown RBP8.81□□□□□ -1
CHD9-217ENST00000565832 DIP2BQ9P265 1576 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms