RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 COL9A1P20849 921 aa12.12□□□□□ -0.47
CHD9-206ENST00000562791 NBR1Q14596 966 aa12.12□□□□□ -0.47
CHD9-206ENST00000562791 EPAS1Q99814 870 aa12.12□□□□□ -0.47
CHD9-206ENST00000562791 ZBED2Q9BTP6 218 aa12.12□□□□□ -0.47
CHD9-206ENST00000562791 RBM33Q96EV2 1170 aaKnown RBP12.11□□□□□ -0.47
CHD9-206ENST00000562791 PRIM1P49642 420 aaKnown RBP12.1□□□□□ -0.47
CHD9-206ENST00000562791 HAP1P54257 671 aaPredicted RBP12.1□□□□□ -0.47
CHD9-206ENST00000562791 PPP1R3GB7ZBB8 358 aa12.09□□□□□ -0.47
CHD9-206ENST00000562791 SLC4A5Q9BY07 1137 aa12.09□□□□□ -0.47
CHD9-206ENST00000562791 C6orf132Q5T0Z8 1188 aa12.08□□□□□ -0.48
CHD9-206ENST00000562791 GRXCR2A6NFK2 248 aa12.07□□□□□ -0.48
CHD9-206ENST00000562791 EN1Q05925 392 aaPredicted RBP12.07□□□□□ -0.48
CHD9-206ENST00000562791 PROX2Q3B8N5 592 aa12.07□□□□□ -0.48
CHD9-206ENST00000562791 TSR1Q2NL82 804 aaKnown RBP12.06□□□□□ -0.48
CHD9-206ENST00000562791 ARHGEF1Q92888 912 aaKnown RBP12.05□□□□□ -0.48
CHD9-206ENST00000562791 BHMG1C9JSJ3 638 aaPredicted RBP12.03□□□□□ -0.48
CHD9-206ENST00000562791 MAP3K7O43318 606 aa12.03□□□□□ -0.48
CHD9-206ENST00000562791 OSBPP22059 807 aa12.01□□□□□ -0.49
CHD9-206ENST00000562791 KDM2AQ9Y2K7 1162 aa12.01□□□□□ -0.49
CHD9-206ENST00000562791 MLLT3P42568 568 aaPredicted RBP12□□□□□ -0.49
CHD9-206ENST00000562791 P3H3Q8IVL6 736 aa12□□□□□ -0.49
CHD9-206ENST00000562791 CDHR5Q9HBB8 845 aa11.99□□□□□ -0.49
CHD9-206ENST00000562791 KCTD12Q96CX2 325 aaKnown RBP11.97□□□□□ -0.49
CHD9-206ENST00000562791 STAC3Q96MF2 364 aa11.96□□□□□ -0.49
CHD9-206ENST00000562791 RABGEF1Q9UJ41 708 aa11.95□□□□□ -0.5
CHD9-206ENST00000562791 TRIM6-TRIM34B2RNG4 842 aa11.94□□□□□ -0.5
CHD9-206ENST00000562791 MRPL50Q8N5N7 158 aaKnown RBP11.94□□□□□ -0.5
CHD9-206ENST00000562791 NBPF3Q9H094 633 aa11.93□□□□□ -0.5
CHD9-206ENST00000562791 KIAA1468Q9P260 1216 aa11.93□□□□□ -0.5
CHD9-206ENST00000562791 SEMA3EO15041 775 aa11.92□□□□□ -0.5
CHD9-206ENST00000562791 TSKSQ9UJT2 592 aa11.92□□□□□ -0.5
CHD9-206ENST00000562791 FAM198AQ9UFP1 575 aa11.9□□□□□ -0.5
CHD9-206ENST00000562791 SEPT9Q9UHD8 586 aaPredicted RBP11.9□□□□□ -0.5
CHD9-206ENST00000562791 ONECUT3O60422 494 aaPredicted RBP11.89□□□□□ -0.51
CHD9-206ENST00000562791 CDCA7LQ96GN5 454 aa11.88□□□□□ -0.51
CHD9-206ENST00000562791 C3orf80F5H4A9 247 aa11.87□□□□□ -0.51
CHD9-206ENST00000562791 THSD4Q6ZMP0 1018 aa11.87□□□□□ -0.51
CHD9-206ENST00000562791 WNT2BQ93097 391 aa11.87□□□□□ -0.51
CHD9-206ENST00000562791 NPDC1Q9NQX5 325 aaPredicted RBP11.87□□□□□ -0.51
CHD9-206ENST00000562791 HCSTQ9UBK5 93 aa11.87□□□□□ -0.51
CHD9-206ENST00000562791 GOLGA8CPA6NN73 597 aa11.86□□□□□ -0.51
CHD9-206ENST00000562791 PRSS12P56730 875 aa11.86□□□□□ -0.51
CHD9-206ENST00000562791 VSIG10Q8N0Z9 540 aa11.85□□□□□ -0.51
CHD9-206ENST00000562791 CERKQ8TCT0 537 aa11.85□□□□□ -0.51
CHD9-206ENST00000562791 PTPN5P54829 565 aa11.84□□□□□ -0.51
CHD9-206ENST00000562791 LAPTM4BQ86VI4 370 aa11.83□□□□□ -0.52
CHD9-206ENST00000562791 TESPA1A2RU30 521 aaPredicted RBP11.82□□□□□ -0.52
CHD9-206ENST00000562791 SMAPO00193 183 aa11.82□□□□□ -0.52
CHD9-206ENST00000562791 ZFRQ96KR1 1074 aaKnown RBP11.82□□□□□ -0.52
CHD9-206ENST00000562791 PACS2Q86VP3 889 aa11.81□□□□□ -0.52
CHD9-206ENST00000562791 BCAMP50895 628 aa11.8□□□□□ -0.52
CHD9-206ENST00000562791 FAM98CQ17RN3 349 aaKnown RBP11.8□□□□□ -0.52
CHD9-206ENST00000562791 PADI6Q6TGC4 694 aa11.8□□□□□ -0.52
CHD9-206ENST00000562791 RBM27Q9P2N5 1060 aaKnown RBP11.8□□□□□ -0.52
CHD9-206ENST00000562791 TTC13Q8NBP0 860 aa11.79□□□□□ -0.52
CHD9-206ENST00000562791 ANKK1Q8NFD2 765 aa11.79□□□□□ -0.52
CHD9-206ENST00000562791 PTGDRQ13258 359 aa11.77□□□□□ -0.53
CHD9-206ENST00000562791 TATDN2Q93075 761 aa11.77□□□□□ -0.53
CHD9-206ENST00000562791 PNMA3Q9UL41 463 aa11.77□□□□□ -0.53
CHD9-206ENST00000562791 SOWAHBA6NEL2 793 aa11.76□□□□□ -0.53
CHD9-206ENST00000562791 NBPF26B4DH59 902 aa11.76□□□□□ -0.53
CHD9-206ENST00000562791 NUTM2FA1L443 756 aa11.75□□□□□ -0.53
CHD9-206ENST00000562791 RBM26Q5T8P6 1007 aaKnown RBP11.75□□□□□ -0.53
CHD9-206ENST00000562791 NUDT18Q6ZVK8 323 aa11.75□□□□□ -0.53
CHD9-206ENST00000562791 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.71□□□□□ -0.53
CHD9-206ENST00000562791 PLA2G2EQ9NZK7 142 aa11.71□□□□□ -0.53
CHD9-206ENST00000562791 SAMD7Q7Z3H4 446 aa11.7□□□□□ -0.54
CHD9-206ENST00000562791 LRCH3Q96II8 777 aa11.7□□□□□ -0.54
CHD9-206ENST00000562791 WBP1LQ9NX94 342 aa11.7□□□□□ -0.54
CHD9-206ENST00000562791 GPR37O15354 613 aa11.68□□□□□ -0.54
CHD9-206ENST00000562791 HPS5Q9UPZ3 1129 aa11.68□□□□□ -0.54
CHD9-206ENST00000562791 FCHSD2O94868 740 aa11.67□□□□□ -0.54
CHD9-206ENST00000562791 FAM161AQ3B820 660 aa11.66□□□□□ -0.54
CHD9-206ENST00000562791 SMYD5Q6GMV2 418 aa11.66□□□□□ -0.54
CHD9-206ENST00000562791 EYA1Q99502 592 aa11.66□□□□□ -0.54
CHD9-206ENST00000562791 TSR3Q9UJK0 312 aaKnown RBP11.64□□□□□ -0.55
CHD9-206ENST00000562791 ADGRG1Q9Y653 693 aa11.64□□□□□ -0.55
CHD9-206ENST00000562791 FECHP22830 423 aa11.62□□□□□ -0.55
CHD9-206ENST00000562791 HIC1Q14526 733 aa11.61□□□□□ -0.55
CHD9-206ENST00000562791 SWT1Q5T5J6 900 aaKnown RBP11.61□□□□□ -0.55
CHD9-206ENST00000562791 RNF40O75150 1001 aa11.59□□□□□ -0.55
CHD9-206ENST00000562791 PPP4CP60510 307 aa11.58□□□□□ -0.56
CHD9-206ENST00000562791 NYAP1Q6ZVC0 841 aa11.58□□□□□ -0.56
CHD9-206ENST00000562791 GPIHBP1Q8IV16 184 aa11.58□□□□□ -0.56
CHD9-206ENST00000562791 GNPATO15228 680 aa11.57□□□□□ -0.56
CHD9-206ENST00000562791 RBM46Q8TBY0 533 aaKnown RBP11.56□□□□□ -0.56
CHD9-206ENST00000562791 RCCD1A6NED2 376 aa11.55□□□□□ -0.56
CHD9-206ENST00000562791 ITGBL1O95965 494 aaPredicted RBP11.55□□□□□ -0.56
CHD9-206ENST00000562791 DNAJB2P25686 324 aa11.55□□□□□ -0.56
CHD9-206ENST00000562791 TMEM134Q9H6X4 195 aa11.54□□□□□ -0.56
CHD9-206ENST00000562791 HDGFP51858 240 aaKnown RBP11.53□□□□□ -0.56
CHD9-206ENST00000562791 IFFO2Q5TF58 517 aa11.53□□□□□ -0.56
CHD9-206ENST00000562791 PXYLP1Q8TE99 480 aa11.53□□□□□ -0.56
CHD9-206ENST00000562791 APLP1P51693 650 aa11.52□□□□□ -0.57
CHD9-206ENST00000562791 METTL3Q86U44 580 aaKnown RBP11.51□□□□□ -0.57
CHD9-206ENST00000562791 SLF2Q8IX21 1173 aa11.51□□□□□ -0.57
CHD9-206ENST00000562791 OATP04181 439 aa11.48□□□□□ -0.57
CHD9-206ENST00000562791 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.47□□□□□ -0.57
CHD9-206ENST00000562791 A0A0G2JS52 829 aa11.47□□□□□ -0.57
CHD9-206ENST00000562791 TULP1O00294 542 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms