RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 ERICH6Q7L0X2 663 aa29.39■■■□□ 2.3
LINC00565-201ENST00000562710 LRPPRCP42704 1394 aaKnown RBP29.38■■■□□ 2.29
LINC00565-201ENST00000562710 CCDC141Q6ZP82 1450 aa29.38■■■□□ 2.29
LINC00565-201ENST00000562710 BRD4O60885 1362 aaPredicted RBP29.38■■■□□ 2.29
LINC00565-201ENST00000562710 FAM135AQ9P2D6 1515 aa29.38■■■□□ 2.29
LINC00565-201ENST00000562710 SAMD9LQ8IVG5 1584 aa29.37■■■□□ 2.29
LINC00565-201ENST00000562710 MYBBP1AQ9BQG0 1328 aaKnown RBP29.37■■■□□ 2.29
LINC00565-201ENST00000562710 CDC42BPBQ9Y5S2 1711 aa29.37■■■□□ 2.29
LINC00565-201ENST00000562710 RALBP1Q15311 655 aa29.36■■■□□ 2.29
LINC00565-201ENST00000562710 PREX2Q70Z35 1606 aa29.35■■■□□ 2.29
LINC00565-201ENST00000562710 RSPH4AQ5TD94 716 aa29.32■■■□□ 2.28
LINC00565-201ENST00000562710 SENP3-EIF4A1A0A087X0R7 540 aa29.32■■■□□ 2.28
LINC00565-201ENST00000562710 TRPM1Q7Z4N2 1603 aa29.31■■■□□ 2.28
LINC00565-201ENST00000562710 CCDC136Q96JN2 1154 aa29.31■■■□□ 2.28
LINC00565-201ENST00000562710 PRAG1Q86YV5 1406 aa29.3■■■□□ 2.28
LINC00565-201ENST00000562710 CCDC144AA2RUR9 1427 aa29.28■■■□□ 2.28
LINC00565-201ENST00000562710 UNC13BO14795 1591 aa29.23■■■□□ 2.27
LINC00565-201ENST00000562710 MAST1Q9Y2H9 1570 aa29.22■■■□□ 2.27
LINC00565-201ENST00000562710 SYCP2Q9BX26 1530 aa29.21■■■□□ 2.27
LINC00565-201ENST00000562710 PARD3Q8TEW0 1356 aa29.21■■■□□ 2.27
LINC00565-201ENST00000562710 PLA2R1Q13018 1463 aa29.2■■■□□ 2.27
LINC00565-201ENST00000562710 GPRASP1Q5JY77 1395 aa29.2■■■□□ 2.26
LINC00565-201ENST00000562710 NLRP13Q86W25 1043 aa29.2■■■□□ 2.26
LINC00565-201ENST00000562710 NBPF1Q3BBV0 1214 aa29.18■■■□□ 2.26
LINC00565-201ENST00000562710 RGL3Q3MIN7 710 aa29.17■■■□□ 2.26
LINC00565-201ENST00000562710 A2MP01023 1474 aa29.17■■■□□ 2.26
LINC00565-201ENST00000562710 LAMC1P11047 1609 aa29.16■■■□□ 2.26
LINC00565-201ENST00000562710 ARHGAP5Q13017 1502 aa29.16■■■□□ 2.26
LINC00565-201ENST00000562710 TTC37Q6PGP7 1564 aa29.16■■■□□ 2.26
LINC00565-201ENST00000562710 PER1O15534 1290 aaPredicted RBP29.15■■■□□ 2.26
LINC00565-201ENST00000562710 IQGAP3Q86VI3 1631 aa29.13■■■□□ 2.25
LINC00565-201ENST00000562710 PRDM15P57071 1507 aaPredicted RBP29.13■■■□□ 2.25
LINC00565-201ENST00000562710 BCL11AQ9H165 835 aa29.13■■■□□ 2.25
LINC00565-201ENST00000562710 COL17A1Q9UMD9 1497 aaPredicted RBP29.13■■■□□ 2.25
LINC00565-201ENST00000562710 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.12■■■□□ 2.25
LINC00565-201ENST00000562710 PLXNC1O60486 1568 aa29.12■■■□□ 2.25
LINC00565-201ENST00000562710 RRP1P56182 461 aaKnown RBP29.12■■■□□ 2.25
LINC00565-201ENST00000562710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.12■■■□□ 2.25
LINC00565-201ENST00000562710 MYO5CQ9NQX4 1742 aa29.11■■■□□ 2.25
LINC00565-201ENST00000562710 PDE3BQ13370 1112 aa29.09■■■□□ 2.25
LINC00565-201ENST00000562710 NOP58Q9Y2X3 529 aaKnown RBP29.09■■■□□ 2.25
LINC00565-201ENST00000562710 TESK2Q96S53 571 aa29.09■■■□□ 2.25
LINC00565-201ENST00000562710 WASHC2CQ9Y4E1 1318 aa29.09■■■□□ 2.25
LINC00565-201ENST00000562710 EIF2AK4Q9P2K8 1649 aaKnown RBP29.08■■■□□ 2.25
LINC00565-201ENST00000562710 RCAN3Q9UKA8 241 aa29.08■■■□□ 2.25
LINC00565-201ENST00000562710 PLEKHH2Q8IVE3 1493 aa29.08■■■□□ 2.25
LINC00565-201ENST00000562710 DISP3Q9P2K9 1392 aa29.07■■■□□ 2.24
LINC00565-201ENST00000562710 SALL2Q9Y467 1007 aaPredicted RBP29.05■■■□□ 2.24
LINC00565-201ENST00000562710 ATP10AO60312 1499 aa29.04■■■□□ 2.24
LINC00565-201ENST00000562710 MYT1LQ9UL68 1186 aa29.04■■■□□ 2.24
LINC00565-201ENST00000562710 DUOX2Q9NRD8 1548 aa29.03■■■□□ 2.24
LINC00565-201ENST00000562710 ERBINQ96RT1 1412 aa29.03■■■□□ 2.24
LINC00565-201ENST00000562710 CHD1O14646 1710 aa29.03■■■□□ 2.24
LINC00565-201ENST00000562710 MAGI2Q86UL8 1455 aa29.02■■■□□ 2.24
LINC00565-201ENST00000562710 EXOC6Q8TAG9 804 aa29.02■■■□□ 2.24
LINC00565-201ENST00000562710 SHROOM2Q13796 1616 aa29.01■■■□□ 2.24
LINC00565-201ENST00000562710 INSRP06213 1382 aa29.01■■■□□ 2.23
LINC00565-201ENST00000562710 ANP32AP39687 249 aaKnown RBP29■■■□□ 2.23
LINC00565-201ENST00000562710 CC2D1BQ5T0F9 858 aaKnown RBP29■■■□□ 2.23
LINC00565-201ENST00000562710 ZMYM4Q5VZL5 1548 aa28.99■■■□□ 2.23
LINC00565-201ENST00000562710 PANK3Q9H999 370 aa28.99■■■□□ 2.23
LINC00565-201ENST00000562710 PAK3O75914 559 aaPredicted RBP28.99■■■□□ 2.23
LINC00565-201ENST00000562710 TMF1P82094 1093 aa28.98■■■□□ 2.23
LINC00565-201ENST00000562710 ABCC2Q92887 1545 aa28.98■■■□□ 2.23
LINC00565-201ENST00000562710 BLMP54132 1417 aaPredicted RBP28.97■■■□□ 2.23
LINC00565-201ENST00000562710 IPO9Q96P70 1041 aaKnown RBP28.97■■■□□ 2.23
LINC00565-201ENST00000562710 CDCA7LQ96GN5 454 aa28.95■■■□□ 2.22
LINC00565-201ENST00000562710 RNF17Q9BXT8 1623 aaKnown RBP28.95■■■□□ 2.22
LINC00565-201ENST00000562710 ERCC6L2Q5T890 1561 aa28.89■■■□□ 2.21
LINC00565-201ENST00000562710 PLCH2O75038 1416 aa28.89■■■□□ 2.21
LINC00565-201ENST00000562710 TCERG1O14776 1098 aaKnown RBP28.88■■■□□ 2.21
LINC00565-201ENST00000562710 ZBTB47Q9UFB7 747 aaPredicted RBP28.85■■■□□ 2.21
LINC00565-201ENST00000562710 EFCAB2Q5VUJ9 269 aa28.83■■■□□ 2.21
LINC00565-201ENST00000562710 ABCC1P33527 1531 aa28.83■■■□□ 2.2
LINC00565-201ENST00000562710 MADDQ8WXG6 1647 aa28.82■■■□□ 2.2
LINC00565-201ENST00000562710 WDR7Q9Y4E6 1490 aa28.82■■■□□ 2.2
LINC00565-201ENST00000562710 IQGAP1P46940 1657 aa28.82■■■□□ 2.2
LINC00565-201ENST00000562710 NBR1Q14596 966 aa28.81■■■□□ 2.2
LINC00565-201ENST00000562710 TRAPPC8Q9Y2L5 1435 aa28.79■■■□□ 2.2
LINC00565-201ENST00000562710 DEKP35659 375 aaKnown RBP28.79■■■□□ 2.2
LINC00565-201ENST00000562710 ZCCHC11Q5TAX3 1644 aaKnown RBP28.79■■■□□ 2.2
LINC00565-201ENST00000562710 PLIN1O60240 522 aa28.78■■■□□ 2.2
LINC00565-201ENST00000562710 MS4A1P11836 297 aa28.77■■■□□ 2.2
LINC00565-201ENST00000562710 ADAMTS8Q9UP79 889 aa28.77■■■□□ 2.2
LINC00565-201ENST00000562710 PDE4AP27815 886 aa28.76■■■□□ 2.2
LINC00565-201ENST00000562710 KNSTRNQ9Y448 316 aa28.76■■■□□ 2.19
LINC00565-201ENST00000562710 SPHKAPQ2M3C7 1700 aa28.75■■■□□ 2.19
LINC00565-201ENST00000562710 TRPM2O94759 1503 aa28.75■■■□□ 2.19
LINC00565-201ENST00000562710 CEP152O94986 1710 aa28.74■■■□□ 2.19
LINC00565-201ENST00000562710 BACH2Q9BYV9 841 aa28.74■■■□□ 2.19
LINC00565-201ENST00000562710 PPP2R1AP30153 589 aa28.73■■■□□ 2.19
LINC00565-201ENST00000562710 CRBNQ96SW2 442 aa28.72■■■□□ 2.19
LINC00565-201ENST00000562710 SYNMO15061 1565 aa28.72■■■□□ 2.19
LINC00565-201ENST00000562710 AMER1Q5JTC6 1135 aaPredicted RBP28.71■■■□□ 2.19
LINC00565-201ENST00000562710 SCAF11Q99590 1463 aaKnown RBP28.71■■■□□ 2.19
LINC00565-201ENST00000562710 CDCA8Q53HL2 280 aa28.71■■■□□ 2.19
LINC00565-201ENST00000562710 STAC3Q96MF2 364 aa28.71■■■□□ 2.19
LINC00565-201ENST00000562710 SCAPERQ9BY12 1400 aa28.7■■■□□ 2.19
LINC00565-201ENST00000562710 SPAG9O60271 1321 aaKnown RBP28.7■■■□□ 2.19
LINC00565-201ENST00000562710 RTEL1-TNFRSF6BF6WH68 1400 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms