RNA–Protein interactions for RNA: ENST00000562212.5

SCAMP5-203, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 1 (best) BASIC

Gene SCAMP5, Length 3,400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-203ENST00000562212 KNSTRNQ9Y448 316 aa16.6■□□□□ 0.25
SCAMP5-203ENST00000562212 PLEKHH2Q8IVE3 1493 aa16.59■□□□□ 0.25
SCAMP5-203ENST00000562212 DNMT1P26358 1616 aaKnown RBP16.59■□□□□ 0.25
SCAMP5-203ENST00000562212 TMF1P82094 1093 aa16.59■□□□□ 0.25
SCAMP5-203ENST00000562212 EXOC6Q8TAG9 804 aa16.58■□□□□ 0.24
SCAMP5-203ENST00000562212 WDR43Q15061 677 aaKnown RBP eCLIP16.57■□□□□ 0.24
SCAMP5-203ENST00000562212 BCL11AQ9H165 835 aa16.57■□□□□ 0.24
SCAMP5-203ENST00000562212 GCC2Q8IWJ2 1684 aa16.55■□□□□ 0.24
SCAMP5-203ENST00000562212 CFAP70Q5T0N1 1121 aa16.55■□□□□ 0.24
SCAMP5-203ENST00000562212 NUP160Q12769 1436 aa16.55■□□□□ 0.24
SCAMP5-203ENST00000562212 MSH5O43196 834 aa16.55■□□□□ 0.24
SCAMP5-203ENST00000562212 KTN1Q86UP2 1357 aaKnown RBP16.54■□□□□ 0.24
SCAMP5-203ENST00000562212 TRAK1Q9UPV9 953 aa16.54■□□□□ 0.24
SCAMP5-203ENST00000562212 MYBBP1AQ9BQG0 1328 aaKnown RBP16.54■□□□□ 0.24
SCAMP5-203ENST00000562212 TMEM132EQ6IEE7 984 aa16.53■□□□□ 0.24
SCAMP5-203ENST00000562212 ERCC6L2Q5T890 1561 aa16.53■□□□□ 0.24
SCAMP5-203ENST00000562212 DHX29Q7Z478 1369 aaKnown RBP16.52■□□□□ 0.24
SCAMP5-203ENST00000562212 STK26Q9P289 416 aa16.52■□□□□ 0.24
SCAMP5-203ENST00000562212 SPATA31E1Q6ZUB1 1445 aa16.52■□□□□ 0.23
SCAMP5-203ENST00000562212 RCAN3Q9UKA8 241 aa16.52■□□□□ 0.23
SCAMP5-203ENST00000562212 NLRP13Q86W25 1043 aa16.51■□□□□ 0.23
SCAMP5-203ENST00000562212 SYCP2Q9BX26 1530 aa16.51■□□□□ 0.23
SCAMP5-203ENST00000562212 RSPH4AQ5TD94 716 aa16.51■□□□□ 0.23
SCAMP5-203ENST00000562212 DISP3Q9P2K9 1392 aa16.5■□□□□ 0.23
SCAMP5-203ENST00000562212 ADAMTS8Q9UP79 889 aa16.5■□□□□ 0.23
SCAMP5-203ENST00000562212 RALBP1Q15311 655 aa16.5■□□□□ 0.23
SCAMP5-203ENST00000562212 CCDC141Q6ZP82 1450 aa16.49■□□□□ 0.23
SCAMP5-203ENST00000562212 SCAPERQ9BY12 1400 aa16.49■□□□□ 0.23
SCAMP5-203ENST00000562212 MLECQ14165 292 aa16.48■□□□□ 0.23
SCAMP5-203ENST00000562212 RRP7AQ9Y3A4 280 aaKnown RBP16.47■□□□□ 0.23
SCAMP5-203ENST00000562212 TRAPPC8Q9Y2L5 1435 aa16.46■□□□□ 0.23
SCAMP5-203ENST00000562212 RAPGEF3O95398 923 aa16.45■□□□□ 0.22
SCAMP5-203ENST00000562212 ABCC10Q5T3U5 1492 aa16.45■□□□□ 0.22
SCAMP5-203ENST00000562212 MBD5Q9P267 1494 aa16.43■□□□□ 0.22
SCAMP5-203ENST00000562212 CANXP27824 592 aaKnown RBP16.42■□□□□ 0.22
SCAMP5-203ENST00000562212 BCORL1Q5H9F3 1711 aa16.42■□□□□ 0.22
SCAMP5-203ENST00000562212 RGS3P49796 1198 aa16.42■□□□□ 0.22
SCAMP5-203ENST00000562212 TESK2Q96S53 571 aa16.42■□□□□ 0.22
SCAMP5-203ENST00000562212 RRP1P56182 461 aaKnown RBP16.41■□□□□ 0.22
SCAMP5-203ENST00000562212 CYB5RLQ6IPT4 315 aa16.41■□□□□ 0.22
SCAMP5-203ENST00000562212 FAM135AQ9P2D6 1515 aa16.41■□□□□ 0.22
SCAMP5-203ENST00000562212 ITSN2Q9NZM3 1697 aa16.41■□□□□ 0.22
SCAMP5-203ENST00000562212 C20orf194Q5TEA3 1177 aa16.41■□□□□ 0.22
SCAMP5-203ENST00000562212 CRBNQ96SW2 442 aa16.41■□□□□ 0.22
SCAMP5-203ENST00000562212 STAG3Q9UJ98 1225 aa16.41■□□□□ 0.22
SCAMP5-203ENST00000562212 APAF1O14727 1248 aa16.4■□□□□ 0.22
SCAMP5-203ENST00000562212 ANP32AP39687 249 aaKnown RBP16.4■□□□□ 0.22
SCAMP5-203ENST00000562212 ADGRF5Q8IZF2 1346 aa16.4■□□□□ 0.22
SCAMP5-203ENST00000562212 PPM1GO15355 546 aaPredicted RBP16.39■□□□□ 0.22
SCAMP5-203ENST00000562212 FRAT1Q92837 279 aaPredicted RBP16.39■□□□□ 0.21
SCAMP5-203ENST00000562212 ABCA8O94911 1581 aa16.38■□□□□ 0.21
SCAMP5-203ENST00000562212 PAK3O75914 559 aaPredicted RBP16.38■□□□□ 0.21
SCAMP5-203ENST00000562212 LAS1LQ9Y4W2 734 aaKnown RBP16.38■□□□□ 0.21
SCAMP5-203ENST00000562212 WASHC2CQ9Y4E1 1318 aa16.38■□□□□ 0.21
SCAMP5-203ENST00000562212 CDC42BPAQ5VT25 1732 aa16.38■□□□□ 0.21
SCAMP5-203ENST00000562212 PER1O15534 1290 aaPredicted RBP16.38■□□□□ 0.21
SCAMP5-203ENST00000562212 BCL2L13Q9BXK5 485 aa16.37■□□□□ 0.21
SCAMP5-203ENST00000562212 ADGRL2O95490 1459 aa16.37■□□□□ 0.21
SCAMP5-203ENST00000562212 SLC12A5Q9H2X9 1139 aa16.37■□□□□ 0.21
SCAMP5-203ENST00000562212 KANK1Q14678 1352 aa16.37■□□□□ 0.21
SCAMP5-203ENST00000562212 PPP2R1AP30153 589 aa16.36■□□□□ 0.21
SCAMP5-203ENST00000562212 PRAG1Q86YV5 1406 aa16.35■□□□□ 0.21
SCAMP5-203ENST00000562212 SAMD9LQ8IVG5 1584 aa16.35■□□□□ 0.21
SCAMP5-203ENST00000562212 ERBINQ96RT1 1412 aa16.35■□□□□ 0.21
SCAMP5-203ENST00000562212 ARHGEF12Q9NZN5 1544 aa16.35■□□□□ 0.21
SCAMP5-203ENST00000562212 RALGAPBQ86X10 1494 aa16.34■□□□□ 0.21
SCAMP5-203ENST00000562212 TTC37Q6PGP7 1564 aa16.34■□□□□ 0.21
SCAMP5-203ENST00000562212 A2MP01023 1474 aa16.33■□□□□ 0.21
SCAMP5-203ENST00000562212 PLA2R1Q13018 1463 aa16.33■□□□□ 0.21
SCAMP5-203ENST00000562212 CFAP65Q6ZU64 1925 aaKnown RBP16.33■□□□□ 0.21
SCAMP5-203ENST00000562212 MORC1Q86VD1 984 aa16.33■□□□□ 0.2
SCAMP5-203ENST00000562212 ZBTB47Q9UFB7 747 aaPredicted RBP16.33■□□□□ 0.2
SCAMP5-203ENST00000562212 BRD4O60885 1362 aaPredicted RBP16.33■□□□□ 0.2
SCAMP5-203ENST00000562212 SLC4A3P48751 1232 aa16.33■□□□□ 0.2
SCAMP5-203ENST00000562212 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.32■□□□□ 0.2
SCAMP5-203ENST00000562212 SMG6Q86US8 1419 aaKnown RBP16.32■□□□□ 0.2
SCAMP5-203ENST00000562212 U2SURPO15042 1029 aaKnown RBP16.31■□□□□ 0.2
SCAMP5-203ENST00000562212 CLUAP1Q96AJ1 413 aa16.31■□□□□ 0.2
SCAMP5-203ENST00000562212 ARID4BQ4LE39 1312 aaPredicted RBP16.31■□□□□ 0.2
SCAMP5-203ENST00000562212 SRPK2P78362 688 aaKnown RBP16.31■□□□□ 0.2
SCAMP5-203ENST00000562212 OSCARQ8IYS5 282 aa16.3■□□□□ 0.2
SCAMP5-203ENST00000562212 CDCA8Q53HL2 280 aa16.3■□□□□ 0.2
SCAMP5-203ENST00000562212 CABP2Q9NPB3 220 aa16.3■□□□□ 0.2
SCAMP5-203ENST00000562212 CHD1O14646 1710 aa16.29■□□□□ 0.2
SCAMP5-203ENST00000562212 PLEKHG5O94827 1062 aa16.29■□□□□ 0.2
SCAMP5-203ENST00000562212 NOP58Q9Y2X3 529 aaKnown RBP16.29■□□□□ 0.2
SCAMP5-203ENST00000562212 BCAR3O75815 825 aa16.29■□□□□ 0.2
SCAMP5-203ENST00000562212 PLCH2O75038 1416 aa16.28■□□□□ 0.2
SCAMP5-203ENST00000562212 ERICH6BQ5W0A0 696 aa16.28■□□□□ 0.2
SCAMP5-203ENST00000562212 ADGBQ8N7X0 1667 aa16.27■□□□□ 0.2
SCAMP5-203ENST00000562212 KDM5CP41229 1560 aa16.27■□□□□ 0.2
SCAMP5-203ENST00000562212 NUTM2FA1L443 756 aa16.27■□□□□ 0.2
SCAMP5-203ENST00000562212 GOLGA2Q08379 1002 aa16.27■□□□□ 0.2
SCAMP5-203ENST00000562212 MINK1Q8N4C8 1332 aaPredicted RBP16.27■□□□□ 0.19
SCAMP5-203ENST00000562212 DAXXQ9UER7 740 aaPredicted RBP16.26■□□□□ 0.19
SCAMP5-203ENST00000562212 FBLN1P23142 703 aa16.26■□□□□ 0.19
SCAMP5-203ENST00000562212 SPINK5Q9NQ38 1064 aaPredicted RBP16.26■□□□□ 0.19
SCAMP5-203ENST00000562212 POGKQ9P215 609 aa16.25■□□□□ 0.19
SCAMP5-203ENST00000562212 UHRF1BP1Q6BDS2 1440 aa16.25■□□□□ 0.19
SCAMP5-203ENST00000562212 SOX12O15370 315 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms